CF504071

Overview
NameCF504071
Unique NameCF504071
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length451
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAOX_MOUSE (NADP-dependent malic enzyme OS=Mus musculus GN=Me1 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.303e-25
Identity = 70/145 (48.28%), Postives = 82/145 (56.55%), Query Frame = 3
Query:    9 YGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIG 443
            YG   LIQFEDFAN NAF LL KY   +  FNDDIQ                    L++   LF GAGEA  GIA L+ + + K+  +  E  RKKI LVDSKGLIV  R  SL   K+ +AHEHE + NL   V+ IKPT LIG
Sbjct:  236 YGMNCLIQFEDFANRNAFRLLNKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTVLFQGAGEAALGIAHLVVMAMEKEGLSK-ENARKKIWLVDSKGLIVKGRA-SLTEEKEVFAHEHEEMKNLEAIVQKIKPTALIG 378          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAOX_HUMAN (NADP-dependent malic enzyme OS=Homo sapiens GN=ME1 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.303e-25
Identity = 71/145 (48.97%), Postives = 82/145 (56.55%), Query Frame = 3
Query:    9 YGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIG 443
            YG   LIQFEDFAN NAF LL KY   +  FNDDIQ                    L++   LF GAGEA  GIA LI + + K+   P E+  KKI LVDSKGLIV  R  SL   K+ +AHEHE + NL   V+ IKPT LIG
Sbjct:  236 YGMNCLIQFEDFANVNAFRLLNKYRNQYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQGAGEAALGIAHLIVMALEKE-GLPKEKAIKKIWLVDSKGLIVKGRA-SLTQEKEKFAHEHEEMKNLEAIVQEIKPTALIG 378          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAOX_PIG (NADP-dependent malic enzyme (Fragment) OS=Sus scrofa GN=ME1 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 2.222e-25
Identity = 70/145 (48.28%), Postives = 83/145 (57.24%), Query Frame = 3
Query:    9 YGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIG 443
            YG   LIQFEDFAN NAF LL KY   +  FNDDIQ                    L++   LF GAGEA  GIA LI + + K+   P E+  KKI LVDSKGLIV  R  +L + K+ +AHEHE + NL   V+ IKPT LIG
Sbjct:  222 YGMNCLIQFEDFANINAFRLLKKYQNQYCTFNDDIQGTASVAVAGILAALRITKNKLSDQTILFQGAGEAALGIAHLIVMAMEKE-GVPKEKAIKKIWLVDSKGLIVKGRA-ALTNEKEEFAHEHEEMKNLEAIVQDIKPTALIG 364          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAOX_RAT (NADP-dependent malic enzyme OS=Rattus norvegicus GN=Me1 PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 4.951e-25
Identity = 70/145 (48.28%), Postives = 83/145 (57.24%), Query Frame = 3
Query:    9 YGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIG 443
            YG   LIQFEDFAN NAF LL KY   +  FNDDIQ                    L++   LF GAGEA  GIA LI + + K+  +  E+ R+KI LVDSKGLIV  R  SL   K+ +AHEHE + NL   V+ IKPT LIG
Sbjct:  236 YGMNCLIQFEDFANLNAFRLLNKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTVLFQGAGEAALGIAHLIVMAMEKEGLSK-EKARQKIWLVDSKGLIVKGRA-SLTEEKEVFAHEHEEMKNLEAIVQKIKPTALIG 378          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAON_HUMAN (NADP-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME3 PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 4.951e-25
Identity = 64/145 (44.14%), Postives = 84/145 (57.93%), Query Frame = 3
Query:    9 YGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIG 443
            +G   LIQFEDFAN NAF LL KY   + +FNDDIQ                    L+ H F+F GAGEA  GIA L+ + + K+   P  E  +KI +VDSKGLIV  R   L H K+ +A +H  VN+L + V+++KPT +IG
Sbjct:  271 FGINCLIQFEDFANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKE-GVPKAEATRKIWMVDSKGLIVKGR-SHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIG 413          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAOX_ANAPL (NADP-dependent malic enzyme OS=Anas platyrhynchos GN=ME1 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 6.466e-25
Identity = 69/145 (47.59%), Postives = 82/145 (56.55%), Query Frame = 3
Query:    9 YGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIG 443
            YG   LIQFEDFAN NAF LL KY   +  FNDDIQ                    L++H  LF GAGEA  GIA LI + + K+  +  E   K+I +VDSKGLIV  R  SL   K  +AHEH  + NL D VK IKP++LIG
Sbjct:  225 YGMNCLIQFEDFANANAFRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMEKEGVSK-EAAVKRIWMVDSKGLIVKGRA-SLTAEKTRFAHEHAEMKNLEDIVKDIKPSVLIG 367          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAON_MOUSE (NADP-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me3 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 3.209e-24
Identity = 64/145 (44.14%), Postives = 83/145 (57.24%), Query Frame = 3
Query:    9 YGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIG 443
            +G   LIQFEDFAN NAF LL KY   + +FNDDIQ                    L+ H F+F GA EA  GIA L+ + + K+   P  E  KKI +VDSKGLIV  R   L H K+ +A +H  VN+L + V+++KPT +IG
Sbjct:  271 FGINCLIQFEDFANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNRLSNHVFVFQGADEAAMGIAHLLVMALEKE-GIPKTEAIKKIWMVDSKGLIVKGR-SHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIG 413          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAOM_HUMAN (NAD-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME2 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.032e-22
Identity = 57/147 (38.78%), Postives = 79/147 (53.74%), Query Frame = 3
Query:    9 YGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE--HEPVNNLLDAVKVIKPTILIG 443
            YG   LIQFEDF NHNAF  L KY   +  FNDDIQ                    ++EH+ LFLGAGEA  GIA LI + + +   +  +E +KKI + D  GL+V  RK  +  +++P+ H       +   DAV ++KP+ +IG
Sbjct:  246 YGRNTLIQFEDFGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVENGLSE-QEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFEDAVNILKPSTIIG 391          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAOM_MOUSE (NAD-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me2 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.761e-22
Identity = 61/148 (41.22%), Postives = 80/148 (54.05%), Query Frame = 3
Query:    9 YGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH---EHEPVNNLLDAVKVIKPTILIG 443
            YG   LIQFEDF NHNAF  L KY   +  FNDDIQ                    ++EH+ LFLGAGEA  GIA LI L +  ++    EE ++KI + D  GL+V  R  S+   ++P+AH   E  P     DAV  +KP+++IG
Sbjct:  246 YGRNTLIQFEDFGNHNAFRFLRKYQQKYCTFNDDIQGTAAVALSGLLAAQRVINKPVSEHKILFLGAGEAALGIANLIVLSM-VESGLSEEEAQRKIWMFDKSGLLVKGRTASIDSNQEPYAHAAPESIPA-TFEDAVNKLKPSVIIG 391          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAOX_DICDI (NADP-dependent malic enzyme OS=Dictyostelium discoideum GN=malA PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.543e-21
Identity = 59/150 (39.33%), Postives = 81/150 (54.00%), Query Frame = 3
Query:    6 NYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKVIKPTILIGSS 449
            N   KV++QFED +N + F LL +Y   +L FNDDIQ                    + EHR +FLGAG AG G+A+ I + +  +     EE RK    VDSKGLI ++R D L   KK +A E     + +LL+ V+ +KPT +IG S
Sbjct:  224 NKWPKVIVQFEDISNDHCFNLLDEYRNKYLCFNDDIQGTGSVILSGFINAVRSVQKPIKEHRMVFLGAGSAGIGVADCI-MSLFDEAGVSKEEARKSFWFVDSKGLITTTRGDELTSQKKQYAREDYTYQLKSLLEVVRDVKPTAIIGLS 372          
The following BLAST results are available for this feature:
BLAST of CF504071 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
MAOX_MOUSE1.303e-2548.28NADP-dependent malic enzyme OS=Mus musculus GN=Me1... [more]
MAOX_HUMAN1.303e-2548.97NADP-dependent malic enzyme OS=Homo sapiens GN=ME1... [more]
MAOX_PIG2.222e-2548.28NADP-dependent malic enzyme (Fragment) OS=Sus scro... [more]
MAOX_RAT4.951e-2548.28NADP-dependent malic enzyme OS=Rattus norvegicus G... [more]
MAON_HUMAN4.951e-2544.14NADP-dependent malic enzyme, mitochondrial OS=Homo... [more]
MAOX_ANAPL6.466e-2547.59NADP-dependent malic enzyme OS=Anas platyrhynchos ... [more]
MAON_MOUSE3.209e-2444.14NADP-dependent malic enzyme, mitochondrial OS=Mus ... [more]
MAOM_HUMAN1.032e-2238.78NAD-dependent malic enzyme, mitochondrial OS=Homo ... [more]
MAOM_MOUSE1.761e-2241.22NAD-dependent malic enzyme, mitochondrial OS=Mus m... [more]
MAOX_DICDI2.543e-2139.33NADP-dependent malic enzyme OS=Dictyostelium disco... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-559 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-13_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504071 ID=CF504071; Name=CF504071; organism=Citrus sinensis; type=EST; length=451bp
AGCAAAATTATGGAGAAAAAGTTCTTATACAGTTTGAGGATTTCGCAAAC
CACAATGCTTTTGAGTTGCTTGCAAAATATGGCACAACTCATCTTGTCTT
CAATGATGATATACAGGGTACAGCGTCTGTTGTTCTTGCTGGGGTAGTTG
CAGCACTGAAGTTGATTGGTGGCACACTGGCCGAGCATAGATTTTTGTTT
CTTGGAGCTGGGGAGGCTGGGACTGGTATAGCTGAACTTATTGCGCTTGA
GATATCAAAGCAGACTAAAGCTCCTGTGGAAGAGACCCGGAAGAAGATAT
GTCTTGTAGACTCAAAGGGACTGATAGTCAGCTCCCGGAAAGATTCACTT
CAACACTTCAAGAAGCCTTGGGCTCATGAACATGAGCCTGTCAACAATCT
CTTAGATGCTGTCAAGGTAATCAAGCCAACAATTTTGATTGGATCATCTG
G
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