CF504071

Overview
NameCF504071
Unique NameCF504071
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length451
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_PSEA7 (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa (strain PA7) GN=sfcA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.398e-11
Identity = 49/154 (31.82%), Postives = 71/154 (46.10%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAE--LIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK---------PWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            VL+QFEDFA  NA  LL +Y      FNDDIQ                    L+E    F+GAG AG GIAE  + A+ +    +A   + R++I +VD  GL+     + L   ++          W  +      LL+ ++  +PT+LIG S
Sbjct:  239 VLLQFEDFAQTNAMPLLERYKDELCCFNDDIQGTAAVAVGTLLAACKAKGEKLSEQTVTFVGAGSAGCGIAEQVIAAMRLEGLDEA---QARRRIFMVDRWGLLTDDMSNLLDFQQRLAQKRADLGAWGGQQGDDLALLEVIRNARPTVLIGVS 389          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAOH_NEOFR (Malic enzyme, hydrogenosomal OS=Neocallimastix frontalis PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.115e-11
Identity = 51/147 (34.69%), Postives = 66/147 (44.90%), Query Frame = 3
Query:   18 KVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAE---HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            K +IQFEDF   NA +LL KY     +FNDDIQ                   T A+     FL LGAG +G G+ E I ++      A  EE   +  + D KGL+   R D L   +     E E      + +K IKPT L+G S
Sbjct:  270 KAVIQFEDFMMPNALDLLLKYKDQICMFNDDIQSTGAITLASVLATMRARGGTFADIKKETFLCLGAGSSGVGVCETI-VDCIVAEGATREEAYAQFYMFDHKGLLGKGRDDLLPSQQVFMRKEIEGGKTPAELLKKIKPTCLLGLS 415          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_COLP3 (NAD-dependent malic enzyme OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=sfcA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.115e-11
Identity = 49/152 (32.24%), Postives = 71/152 (46.71%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV---------NNLLDAVKVIKPTILIGSS 449
            VL+QFEDFA  NA  LL +Y      FNDDIQ                    L+E    F+GAG AG GIAE I  ++  +     E+ R ++ +VD  GL+     + L+ F++     +E +          +L++ +   KP ILIG S
Sbjct:  238 VLLQFEDFAQPNAMPLLQRYKDRICCFNDDIQGTASVTVGTLLAACRSKGSKLSELNVAFVGAGSAGCGIAEQIISQMMNEGLG-AEQARSQVFMVDRFGLLTQGMGE-LRDFQQKLVQSNEAIAEWDIAGEFASLVEVMHGAKPDILIGVS 387          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAOM_YEAST (NAD-dependent malic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=MAE1 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.069e-11
Identity = 53/147 (36.05%), Postives = 66/147 (44.90%), Query Frame = 3
Query:   24 LIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSS---RKDSLQHFKKPWAHEHEPVN--NLLDAVKVIKPTILIGSS 449
            ++ FEDF   NA  LL KY      FNDDIQ                    L + R L  GAG AG GIA+ I   +        EE RKKI L+D +GLI+ S        QH       E   +N  +L D V+ +KPT L+G S
Sbjct:  326 VLHFEDFGVKNARRLLEKYRYELPSFNDDIQGTGAVVMASLIAALKHTNRDLKDTRVLIYGAGSAGLGIADQIVNHMVTH-GVDKEEARKKIFLMDRRGLILQSYEANSTPAQHVYAKSDAEWAGINTRSLHDVVENVKPTCLVGCS 471          
The following BLAST results are available for this feature:
BLAST of CF504071 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
MAO1_PSEA71.398e-1131.82NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAOH_NEOFR3.115e-1134.69Malic enzyme, hydrogenosomal OS=Neocallimastix fro... [more]
MAO1_COLP33.115e-1132.24NAD-dependent malic enzyme OS=Colwellia psychreryt... [more]
MAOM_YEAST4.069e-1136.05NAD-dependent malic enzyme, mitochondrial OS=Sacch... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-559 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-13_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504071 ID=CF504071; Name=CF504071; organism=Citrus sinensis; type=EST; length=451bp
AGCAAAATTATGGAGAAAAAGTTCTTATACAGTTTGAGGATTTCGCAAAC
CACAATGCTTTTGAGTTGCTTGCAAAATATGGCACAACTCATCTTGTCTT
CAATGATGATATACAGGGTACAGCGTCTGTTGTTCTTGCTGGGGTAGTTG
CAGCACTGAAGTTGATTGGTGGCACACTGGCCGAGCATAGATTTTTGTTT
CTTGGAGCTGGGGAGGCTGGGACTGGTATAGCTGAACTTATTGCGCTTGA
GATATCAAAGCAGACTAAAGCTCCTGTGGAAGAGACCCGGAAGAAGATAT
GTCTTGTAGACTCAAAGGGACTGATAGTCAGCTCCCGGAAAGATTCACTT
CAACACTTCAAGAAGCCTTGGGCTCATGAACATGAGCCTGTCAACAATCT
CTTAGATGCTGTCAAGGTAATCAAGCCAACAATTTTGATTGGATCATCTG
G
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