CF504071

Overview
NameCF504071
Unique NameCF504071
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length451
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB8 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS185) GN=sfcA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.723e-15
Identity = 53/151 (35.10%), Postives = 76/151 (50.33%), Query Frame = 3
Query:   24 LIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK---------PWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            LIQFEDFA  NA  +L +Y   +  FNDDIQ                    L + R  FLGAG AG GIAE I  ++  +  +  E+ R ++C+VD  GL++ +  + L   +K          W++  + + +LLD V   KPT+LIG S
Sbjct:  239 LIQFEDFAQKNAMPILERYKDRYCCFNDDIQGTAAVAVGSLLAACKAAGTELNQQRIAFLGAGSAGCGIAEAIVAQMVSEGISD-EQARTQVCMVDRWGLLLDNMPNLLPFQQKLAQKCTNIQNWSNFSDNI-SLLDVVNNTKPTVLIGVS 387          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB5 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=sfcA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.723e-15
Identity = 53/151 (35.10%), Postives = 76/151 (50.33%), Query Frame = 3
Query:   24 LIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK---------PWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            LIQFEDFA  NA  +L +Y   +  FNDDIQ                    L + R  FLGAG AG GIAE I  ++  +  +  E+ R ++C+VD  GL++ +  + L   +K          W++  + + +LLD V   KPT+LIG S
Sbjct:  239 LIQFEDFAQKNAMPILERYKDRYCCFNDDIQGTAAVAVGSLLAACKAAGTELNQQRIAFLGAGSAGCGIAEAIVAQMVSEGISD-EQARTQVCMVDRWGLLLDNMPNLLPFQQKLAQKCTNIQNWSNFSDNI-SLLDVVNNTKPTVLIGVS 387          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB2 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS223) GN=sfcA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.723e-15
Identity = 53/151 (35.10%), Postives = 76/151 (50.33%), Query Frame = 3
Query:   24 LIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK---------PWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            LIQFEDFA  NA  +L +Y   +  FNDDIQ                    L + R  FLGAG AG GIAE I  ++  +  +  E+ R ++C+VD  GL++ +  + L   +K          W++  + + +LLD V   KPT+LIG S
Sbjct:  239 LIQFEDFAQKNAMPILERYKDRYCCFNDDIQGTAAVAVGSLLAACKAAGTELNQQRIAFLGAGSAGCGIAEAIVAQMVSEGISD-EQARTQVCMVDRWGLLLDNMPNLLPFQQKLAQKCTNIQNWSNFSDNI-SLLDVVNNTKPTVLIGVS 387          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_SALAR (NAD-dependent malic enzyme OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=sfcA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.723e-15
Identity = 56/156 (35.90%), Postives = 78/156 (50.00%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVS-------------SRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            +L+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE I  +  ++  +  +  R+K+ +VD  GL+                + D+LQH    W  E++ V +LLD V+ +KP ILIG S
Sbjct:  241 ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQIIAQTQREGLSE-DAARQKVFMVDRFGLLTDRMPNLLSFQTKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVS 390          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_KLEP7 (NAD-dependent malic enzyme OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=sfcA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.723e-15
Identity = 56/152 (36.84%), Postives = 75/152 (49.34%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK---------PWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            VL+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE I  +I ++  +  EE R+++ +VD  GL+     + L    K          W    E + +LLD V+ +KP ILIG S
Sbjct:  241 VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRGAGSQLSEQKIVFLGAGSAGCGIAEQIIAQIVREGLSE-EEARQRVFMVDRFGLLTDGMPNLLPFQNKLVQKREQLQSWDTTSEAL-SLLDVVRNVKPNILIGVS 390          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_SHESA (NAD-dependent malic enzyme OS=Shewanella sp. (strain ANA-3) GN=sfcA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 4.644e-15
Identity = 54/151 (35.76%), Postives = 75/151 (49.67%), Query Frame = 3
Query:   24 LIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNN---------LLDAVKVIKPTILIGSS 449
            LIQFEDFA  NA  +L +Y   +  FNDDIQ                    L + R  FLGAG AG GIAE I  ++  +  +  E+ R ++C+VD  GL++ +  + L  F++  A +   + N         LLD V   KPT+LIG S
Sbjct:  239 LIQFEDFAQKNAMPILERYKDRYCCFNDDIQGTAAVTVGSLLAACKAAGTELNKQRIAFLGAGSAGCGIAEAIVAQMVSEGISD-EQARSQVCMVDRWGLLLDNMPNLLP-FQQKLAQKCADICNWNNFSDNISLLDVVNNAKPTVLIGVS 387          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_BDEBA (NAD-dependent malic enzyme OS=Bdellovibrio bacteriovorus GN=sfcA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 4.644e-15
Identity = 56/152 (36.84%), Postives = 76/152 (50.00%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVN---------NLLDAVKVIKPTILIGSS 449
            VL+QFEDFA  NA  +L +Y      FNDDIQ                    L + R +FLGAG AG GIAE I  E+ K      E+ R+++ +VD  GL+ + +  +L  F+ P   + E +          +LLD V+  KPTILIG S
Sbjct:  241 VLLQFEDFAQKNASPILKRYRDEICSFNDDIQGTAAVTVGCLIAASRANGGRLRDQRVVFLGAGSAGCGIAEQIIAEM-KHEGLSDEQARQRVFMVDRFGLL-TDKMPNLLEFQSPLVQKTETLAGWEVTNDEISLLDTVRNAKPTILIGVS 390          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_SHIFL (NAD-dependent malic enzyme OS=Shigella flexneri GN=sfcA PE=3 SV=4)

HSP 1 Score: 79.7221 bits (195), Expect = 6.066e-15
Identity = 55/152 (36.18%), Postives = 77/152 (50.66%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHE---------PVNNLLDAVKVIKPTILIGSS 449
            VL+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE+I  +  ++  +  E  R+K+ +VD  GL+ + +  +L  F+     + E          V +LLD V+ +KP ILIG S
Sbjct:  241 VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRAAGGQLSEKKIVFLGAGSAGCGIAEMIIAQTQREGLSE-EAARQKVFMVDRFGLL-TDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVS 390          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_SHIF8 (NAD-dependent malic enzyme OS=Shigella flexneri serotype 5b (strain 8401) GN=sfcA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 6.066e-15
Identity = 55/152 (36.18%), Postives = 77/152 (50.66%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHE---------PVNNLLDAVKVIKPTILIGSS 449
            VL+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE+I  +  ++  +  E  R+K+ +VD  GL+ + +  +L  F+     + E          V +LLD V+ +KP ILIG S
Sbjct:  241 VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRAAGGQLSEKKIVFLGAGSAGCGIAEMIIAQTQREGLSE-EAARQKVFMVDRFGLL-TDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVS 390          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_SHIBS (NAD-dependent malic enzyme OS=Shigella boydii serotype 4 (strain Sb227) GN=sfcA PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 6.066e-15
Identity = 55/152 (36.18%), Postives = 77/152 (50.66%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHE---------PVNNLLDAVKVIKPTILIGSS 449
            VL+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE+I  +  ++  +  E  R+K+ +VD  GL+ + +  +L  F+     + E          V +LLD V+ +KP ILIG S
Sbjct:  241 VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRAAGGQLSEKKIVFLGAGSAGCGIAEMIIAQTQREGLSE-EAARQKVFMVDRFGLL-TDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVS 390          
The following BLAST results are available for this feature:
BLAST of CF504071 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
MAO1_SHEB82.723e-1535.10NAD-dependent malic enzyme OS=Shewanella baltica (... [more]
MAO1_SHEB52.723e-1535.10NAD-dependent malic enzyme OS=Shewanella baltica (... [more]
MAO1_SHEB22.723e-1535.10NAD-dependent malic enzyme OS=Shewanella baltica (... [more]
MAO1_SALAR2.723e-1535.90NAD-dependent malic enzyme OS=Salmonella arizonae ... [more]
MAO1_KLEP72.723e-1536.84NAD-dependent malic enzyme OS=Klebsiella pneumonia... [more]
MAO1_SHESA4.644e-1535.76NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]
MAO1_BDEBA4.644e-1536.84NAD-dependent malic enzyme OS=Bdellovibrio bacteri... [more]
MAO1_SHIFL6.066e-1536.18NAD-dependent malic enzyme OS=Shigella flexneri GN... [more]
MAO1_SHIF86.066e-1536.18NAD-dependent malic enzyme OS=Shigella flexneri se... [more]
MAO1_SHIBS6.066e-1536.18NAD-dependent malic enzyme OS=Shigella boydii sero... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-559 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-13_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504071 ID=CF504071; Name=CF504071; organism=Citrus sinensis; type=EST; length=451bp
AGCAAAATTATGGAGAAAAAGTTCTTATACAGTTTGAGGATTTCGCAAAC
CACAATGCTTTTGAGTTGCTTGCAAAATATGGCACAACTCATCTTGTCTT
CAATGATGATATACAGGGTACAGCGTCTGTTGTTCTTGCTGGGGTAGTTG
CAGCACTGAAGTTGATTGGTGGCACACTGGCCGAGCATAGATTTTTGTTT
CTTGGAGCTGGGGAGGCTGGGACTGGTATAGCTGAACTTATTGCGCTTGA
GATATCAAAGCAGACTAAAGCTCCTGTGGAAGAGACCCGGAAGAAGATAT
GTCTTGTAGACTCAAAGGGACTGATAGTCAGCTCCCGGAAAGATTCACTT
CAACACTTCAAGAAGCCTTGGGCTCATGAACATGAGCCTGTCAACAATCT
CTTAGATGCTGTCAAGGTAATCAAGCCAACAATTTTGATTGGATCATCTG
G
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