CF504071

Overview
NameCF504071
Unique NameCF504071
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length451
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_ECODH (NAD-dependent malic enzyme OS=Escherichia coli (strain K12 / DH10B) GN=sfcA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 7.922e-15
Identity = 55/152 (36.18%), Postives = 77/152 (50.66%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHE---------PVNNLLDAVKVIKPTILIGSS 449
            VL+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE+I  +  ++  +  E  R+K+ +VD  GL+ + +  +L  F+     + E          V +LLD V+ +KP ILIG S
Sbjct:  241 VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRAAGGQLSEKKIVFLGAGSAGCGIAEMIISQTQREGLSE-EAARQKVFMVDRFGLL-TDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVS 390          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_ECOBW (NAD-dependent malic enzyme OS=Escherichia coli (strain K12 / BW2952) GN=sfcA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 7.922e-15
Identity = 55/152 (36.18%), Postives = 77/152 (50.66%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHE---------PVNNLLDAVKVIKPTILIGSS 449
            VL+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE+I  +  ++  +  E  R+K+ +VD  GL+ + +  +L  F+     + E          V +LLD V+ +KP ILIG S
Sbjct:  241 VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRAAGGQLSEKKIVFLGAGSAGCGIAEMIISQTQREGLSE-EAARQKVFMVDRFGLL-TDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVS 390          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_ECO55 (NAD-dependent malic enzyme OS=Escherichia coli (strain 55989 / EAEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 7.922e-15
Identity = 55/152 (36.18%), Postives = 77/152 (50.66%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHE---------PVNNLLDAVKVIKPTILIGSS 449
            VL+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE+I  +  ++  +  E  R+K+ +VD  GL+ + +  +L  F+     + E          V +LLD V+ +KP ILIG S
Sbjct:  241 VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRAAGGQLSEKKIVFLGAGSAGCGIAEMIISQTQREGLSE-EAARQKVFMVDRFGLL-TDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVS 390          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_ECO24 (NAD-dependent malic enzyme OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 7.922e-15
Identity = 55/152 (36.18%), Postives = 77/152 (50.66%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHE---------PVNNLLDAVKVIKPTILIGSS 449
            VL+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE+I  +  ++  +  E  R+K+ +VD  GL+ + +  +L  F+     + E          V +LLD V+ +KP ILIG S
Sbjct:  241 VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRAAGGQLSEKKIVFLGAGSAGCGIAEMIISQTQREGLSE-EAARQKVFMVDRFGLL-TDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVS 390          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_ACIAD (NAD-dependent malic enzyme OS=Acinetobacter sp. (strain ADP1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 7.922e-15
Identity = 56/151 (37.09%), Postives = 71/151 (47.02%), Query Frame = 3
Query:   24 LIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK---------PWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            LIQFEDFA  NA  LL KY      FNDDIQ                    L +    FLGAG AG GIAE I  ++  +      + R ++ +VD  GLI  ++ + L   +K          W +  E V +LLD VK  KPT+LIG S
Sbjct:  243 LIQFEDFAQKNAMPLLTKYRDKFCCFNDDIQGTAAVSVGSLIAASRAAGKQLKDQTITFLGAGSAGCGIAEQIVAQMVAEGLTDA-QARARVYMVDRFGLITENQPNLLDFQRKLAQKAEVVSDWGNVEE-VISLLDVVKNAKPTVLIGVS 391          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_SHEPA (NAD-dependent malic enzyme OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.035e-14
Identity = 54/151 (35.76%), Postives = 75/151 (49.67%), Query Frame = 3
Query:   24 LIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK---------PWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            LIQFEDFA  NA  LL +Y   +  FNDDIQ                    L+E R  FLGAG AG GIAE I  ++  +  +   + RK++ +VD  G++ S+  + L   +K          W +  + + +LLD V   KPT+LIG S
Sbjct:  239 LIQFEDFAQKNAMPLLERYKDQYCCFNDDIQGTAAVTVGSLLAACKAAKTQLSEQRITFLGAGSAGCGIAEAIVAQMVSEGISEA-QARKQVFMVDRWGMLQSNMPNLLPFQQKLAQNCDDITSWDNFSDNI-SLLDVVNNAKPTVLIGVS 387          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_SALTY (NAD-dependent malic enzyme OS=Salmonella typhimurium GN=sfcA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.035e-14
Identity = 55/156 (35.26%), Postives = 77/156 (49.36%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVS-------------SRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            +L+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE I  +  ++  +  +  R+ + +VD  GL+                + D+LQH    W  E++ V +LLD V+ +KP ILIG S
Sbjct:  241 ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQIIAQTQREGLSE-DAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVS 390          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_SALTI (NAD-dependent malic enzyme OS=Salmonella typhi GN=sfcA PE=3 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 1.035e-14
Identity = 55/156 (35.26%), Postives = 77/156 (49.36%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVS-------------SRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            +L+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE I  +  ++  +  +  R+ + +VD  GL+                + D+LQH    W  E++ V +LLD V+ +KP ILIG S
Sbjct:  241 ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQIIAQTQREGLSE-DAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVS 390          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_SALSV (NAD-dependent malic enzyme OS=Salmonella schwarzengrund (strain CVM19633) GN=sfcA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.035e-14
Identity = 55/156 (35.26%), Postives = 77/156 (49.36%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVS-------------SRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            +L+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE I  +  ++  +  +  R+ + +VD  GL+                + D+LQH    W  E++ V +LLD V+ +KP ILIG S
Sbjct:  241 ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQIIAQTQREGLSE-DAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVS 390          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_SALPB (NAD-dependent malic enzyme OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=sfcA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.035e-14
Identity = 55/156 (35.26%), Postives = 77/156 (49.36%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVS-------------SRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            +L+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE I  +  ++  +  +  R+ + +VD  GL+                + D+LQH    W  E++ V +LLD V+ +KP ILIG S
Sbjct:  241 ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQIIAQTQREGLSE-DAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVS 390          
The following BLAST results are available for this feature:
BLAST of CF504071 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
MAO1_ECODH7.922e-1536.18NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOBW7.922e-1536.18NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECO557.922e-1536.18NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECO247.922e-1536.18NAD-dependent malic enzyme OS=Escherichia coli O13... [more]
MAO1_ACIAD7.922e-1537.09NAD-dependent malic enzyme OS=Acinetobacter sp. (s... [more]
MAO1_SHEPA1.035e-1435.76NAD-dependent malic enzyme OS=Shewanella pealeana ... [more]
MAO1_SALTY1.035e-1435.26NAD-dependent malic enzyme OS=Salmonella typhimuri... [more]
MAO1_SALTI1.035e-1435.26NAD-dependent malic enzyme OS=Salmonella typhi GN=... [more]
MAO1_SALSV1.035e-1435.26NAD-dependent malic enzyme OS=Salmonella schwarzen... [more]
MAO1_SALPB1.035e-1435.26NAD-dependent malic enzyme OS=Salmonella paratyphi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-559 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-13_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504071 ID=CF504071; Name=CF504071; organism=Citrus sinensis; type=EST; length=451bp
AGCAAAATTATGGAGAAAAAGTTCTTATACAGTTTGAGGATTTCGCAAAC
CACAATGCTTTTGAGTTGCTTGCAAAATATGGCACAACTCATCTTGTCTT
CAATGATGATATACAGGGTACAGCGTCTGTTGTTCTTGCTGGGGTAGTTG
CAGCACTGAAGTTGATTGGTGGCACACTGGCCGAGCATAGATTTTTGTTT
CTTGGAGCTGGGGAGGCTGGGACTGGTATAGCTGAACTTATTGCGCTTGA
GATATCAAAGCAGACTAAAGCTCCTGTGGAAGAGACCCGGAAGAAGATAT
GTCTTGTAGACTCAAAGGGACTGATAGTCAGCTCCCGGAAAGATTCACTT
CAACACTTCAAGAAGCCTTGGGCTCATGAACATGAGCCTGTCAACAATCT
CTTAGATGCTGTCAAGGTAATCAAGCCAACAATTTTGATTGGATCATCTG
G
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