CF504071

Overview
NameCF504071
Unique NameCF504071
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length451
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_SALPA (NAD-dependent malic enzyme OS=Salmonella paratyphi A GN=sfcA PE=3 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 1.035e-14
Identity = 55/156 (35.26%), Postives = 77/156 (49.36%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVS-------------SRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            +L+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE I  +  ++  +  +  R+ + +VD  GL+                + D+LQH    W  E++ V +LLD V+ +KP ILIG S
Sbjct:  241 ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQIIAQTQREGLSE-DAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVS 390          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_SALNS (NAD-dependent malic enzyme OS=Salmonella newport (strain SL254) GN=sfcA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.035e-14
Identity = 55/156 (35.26%), Postives = 77/156 (49.36%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVS-------------SRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            +L+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE I  +  ++  +  +  R+ + +VD  GL+                + D+LQH    W  E++ V +LLD V+ +KP ILIG S
Sbjct:  241 ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQIIAQTQREGLSE-DAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVS 390          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_SALHS (NAD-dependent malic enzyme OS=Salmonella heidelberg (strain SL476) GN=sfcA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.035e-14
Identity = 55/156 (35.26%), Postives = 77/156 (49.36%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVS-------------SRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            +L+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE I  +  ++  +  +  R+ + +VD  GL+                + D+LQH    W  E++ V +LLD V+ +KP ILIG S
Sbjct:  241 ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQIIAQTQREGLSE-DAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVS 390          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_SALG2 (NAD-dependent malic enzyme OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=sfcA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.035e-14
Identity = 55/156 (35.26%), Postives = 77/156 (49.36%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVS-------------SRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            +L+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE I  +  ++  +  +  R+ + +VD  GL+                + D+LQH    W  E++ V +LLD V+ +KP ILIG S
Sbjct:  241 ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQIIAQTQREGLSE-DAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVS 390          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_SALEP (NAD-dependent malic enzyme OS=Salmonella enteritidis PT4 (strain P125109) GN=sfcA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.035e-14
Identity = 55/156 (35.26%), Postives = 77/156 (49.36%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVS-------------SRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            +L+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE I  +  ++  +  +  R+ + +VD  GL+                + D+LQH    W  E++ V +LLD V+ +KP ILIG S
Sbjct:  241 ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQIIAQTQREGLSE-DAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVS 390          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_SALDC (NAD-dependent malic enzyme OS=Salmonella dublin (strain CT_02021853) GN=sfcA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.035e-14
Identity = 55/156 (35.26%), Postives = 77/156 (49.36%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVS-------------SRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            +L+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE I  +  ++  +  +  R+ + +VD  GL+                + D+LQH    W  E++ V +LLD V+ +KP ILIG S
Sbjct:  241 ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQIIAQTQREGLSE-DAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVS 390          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_SALCH (NAD-dependent malic enzyme OS=Salmonella choleraesuis GN=sfcA PE=3 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 1.035e-14
Identity = 55/156 (35.26%), Postives = 77/156 (49.36%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVS-------------SRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            +L+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE I  +  ++  +  +  R+ + +VD  GL+                + D+LQH    W  E++ V +LLD V+ +KP ILIG S
Sbjct:  241 ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQIIAQTQREGLSE-DAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVS 390          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_SALA4 (NAD-dependent malic enzyme OS=Salmonella agona (strain SL483) GN=sfcA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.035e-14
Identity = 55/156 (35.26%), Postives = 77/156 (49.36%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVS-------------SRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            +L+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE I  +  ++  +  +  R+ + +VD  GL+                + D+LQH    W  E++ V +LLD V+ +KP ILIG S
Sbjct:  241 ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQIIAQTQREGLSE-DAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVS 390          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO11_PHOPR (NAD-dependent malic enzyme 1 OS=Photobacterium profundum GN=sfcA1 PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 1.351e-14
Identity = 53/151 (35.10%), Postives = 75/151 (49.67%), Query Frame = 3
Query:   24 LIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVN---------NLLDAVKVIKPTILIGSS 449
            LIQFEDFA  NA  LL +Y      FNDDIQ                    L+E R  FLGAG AG GIAE I  ++  +  +   + R ++ +VD  GL++     +L +F++    + + VN         +LLD ++  KPT+LIG S
Sbjct:  239 LIQFEDFAQKNAMPLLERYKNKICCFNDDIQGTAAVTVGSLLAACKAAKSKLSEQRISFLGAGSAGCGIAEAIIAQMVSEGISEA-QARSQVFMVDRWGLLIDD-MPNLLNFQQALVQKRDTVNEWDLADNNVSLLDVMRNAKPTVLIGVS 387          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_SHEAM (NAD-dependent malic enzyme OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=sfcA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.765e-14
Identity = 52/152 (34.21%), Postives = 78/152 (51.32%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVN---------NLLDAVKVIKPTILIGSS 449
            VLIQFEDFA  NA  +L +Y   +  FNDDIQ                    L++ R  FLGAG AG GIAE I  ++  +  +  ++ R ++ +VD  GL++ +  + L  F++  A + + +N         +LL+ V   KPT+LIG S
Sbjct:  238 VLIQFEDFAQKNAMPILERYKDRYCCFNDDIQGTAAVTVGSLLAACQAAGTKLSDQRITFLGAGSAGCGIAEAIVAQMVSEGISD-DQARSQVFMVDRWGLLLDNMPNLLP-FQQKLAQKIDNINHWDDFSDNVSLLNVVNNAKPTVLIGVS 387          
The following BLAST results are available for this feature:
BLAST of CF504071 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
MAO1_SALPA1.035e-1435.26NAD-dependent malic enzyme OS=Salmonella paratyphi... [more]
MAO1_SALNS1.035e-1435.26NAD-dependent malic enzyme OS=Salmonella newport (... [more]
MAO1_SALHS1.035e-1435.26NAD-dependent malic enzyme OS=Salmonella heidelber... [more]
MAO1_SALG21.035e-1435.26NAD-dependent malic enzyme OS=Salmonella gallinaru... [more]
MAO1_SALEP1.035e-1435.26NAD-dependent malic enzyme OS=Salmonella enteritid... [more]
MAO1_SALDC1.035e-1435.26NAD-dependent malic enzyme OS=Salmonella dublin (s... [more]
MAO1_SALCH1.035e-1435.26NAD-dependent malic enzyme OS=Salmonella choleraes... [more]
MAO1_SALA41.035e-1435.26NAD-dependent malic enzyme OS=Salmonella agona (st... [more]
MAO11_PHOPR1.351e-1435.10NAD-dependent malic enzyme 1 OS=Photobacterium pro... [more]
MAO1_SHEAM1.765e-1434.21NAD-dependent malic enzyme OS=Shewanella amazonens... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-559 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-13_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504071 ID=CF504071; Name=CF504071; organism=Citrus sinensis; type=EST; length=451bp
AGCAAAATTATGGAGAAAAAGTTCTTATACAGTTTGAGGATTTCGCAAAC
CACAATGCTTTTGAGTTGCTTGCAAAATATGGCACAACTCATCTTGTCTT
CAATGATGATATACAGGGTACAGCGTCTGTTGTTCTTGCTGGGGTAGTTG
CAGCACTGAAGTTGATTGGTGGCACACTGGCCGAGCATAGATTTTTGTTT
CTTGGAGCTGGGGAGGCTGGGACTGGTATAGCTGAACTTATTGCGCTTGA
GATATCAAAGCAGACTAAAGCTCCTGTGGAAGAGACCCGGAAGAAGATAT
GTCTTGTAGACTCAAAGGGACTGATAGTCAGCTCCCGGAAAGATTCACTT
CAACACTTCAAGAAGCCTTGGGCTCATGAACATGAGCCTGTCAACAATCT
CTTAGATGCTGTCAAGGTAATCAAGCCAACAATTTTGATTGGATCATCTG
G
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