CF504071

Overview
NameCF504071
Unique NameCF504071
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length451
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_ENTS8 (NAD-dependent malic enzyme OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=sfcA PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 1.765e-14
Identity = 55/156 (35.26%), Postives = 75/156 (48.08%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSS-------------RKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            VL+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE I   +  +     E+ R ++ +VD  GL+  +             ++DSL    K W  + + + +LLD V+  KP ILIG S
Sbjct:  241 VLLQFEDFAQKNAMPLLERYRDEICCFNDDIQGTAAVTLGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQIIAWMRTEGGLSDEQARARVFMVDRFGLLTDNMPNLLSFQSKLVQKRDSL----KGWDTQSDSI-SLLDVVRNAKPDILIGVS 391          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_VIBF1 (NAD-dependent malic enzyme OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=sfcA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.305e-14
Identity = 53/153 (34.64%), Postives = 74/153 (48.37%), Query Frame = 3
Query:   18 KVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK---------KPWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            + L+QFEDFA  NA  LL +Y      FNDDIQ                   +L+E R  FLGAG AG GIAE I  ++  +  +   + R ++ +VD  GL+     + L   +         K W  E EP  +L+D ++  KPT+LIG S
Sbjct:  237 EALVQFEDFAQKNAMPLLERYKNRICCFNDDIQGTAAVTVGSLLAACKAAGSSLSEQRVTFLGAGSAGCGIAEAIIAQMVSEGISDA-QARSQVYMVDRWGLLQEGMPNLLDFQQRLVQKAENTKDWVSE-EPNFSLVDVMRNAKPTVLIGVS 387          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_VIBFM (NAD-dependent malic enzyme OS=Vibrio fischeri (strain MJ11) GN=sfcA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.010e-14
Identity = 53/153 (34.64%), Postives = 74/153 (48.37%), Query Frame = 3
Query:   18 KVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK---------KPWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            + L+QFEDFA  NA  LL +Y      FNDDIQ                   +L+E R  FLGAG AG GIAE I  ++  +  +   + R ++ +VD  GL+     + L   +         K W  E EP  +L+D ++  KPT+LIG S
Sbjct:  237 EALVQFEDFAQKNAMPLLERYKNRICCFNDDIQGTAAVTVGSLLAACKAAGSSLSEQRVTFLGAGSAGCGIAEAIIAQMVSEGISDA-QARSQVYMVDRWGLLQEGMPNLLDFQQRLVQKAENTKDWISE-EPNFSLVDVMRNAKPTVLIGVS 387          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_SHESH (NAD-dependent malic enzyme OS=Shewanella sediminis (strain HAW-EB3) GN=sfcA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.010e-14
Identity = 53/151 (35.10%), Postives = 74/151 (49.01%), Query Frame = 3
Query:   24 LIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVN---------NLLDAVKVIKPTILIGSS 449
            LIQFEDFA  NA  LL +Y   +  FNDD+Q                    L+E R  FLGAG AG GIAE I  ++  +  +  E+ R ++ +VD  GL+      +L  F++  A + + +          +LLD V   KPT+LIG S
Sbjct:  239 LIQFEDFAQKNAMPLLERYKDQYCCFNDDVQGTAAVTVGSLLAACKAAKTKLSEQRVTFLGAGSAGCGIAEAIVAQMIAEGLSE-EQARAQVFMVDRWGLL-QDNMPTLLPFQQKLAQKCDDIEGWDNFSENISLLDVVNNAKPTVLIGVS 387          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_IDILO (NAD-dependent malic enzyme OS=Idiomarina loihiensis GN=sfcA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.010e-14
Identity = 51/152 (33.55%), Postives = 79/152 (51.97%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVN---------NLLDAVKVIKPTILIGSS 449
            V++QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +F+GAG AG GIAE I ++++ +     E+ +++I +VD  GL++ +  D L+ F++  A +   +N         +LLD +   +P ILIG S
Sbjct:  238 VMLQFEDFAQPNAMPLLRRYRDEVCCFNDDIQGTASVTVGTLLAACRQKGKKLSEQKVVFVGAGSAGCGIAEQIMIQMTAEGLTE-EQAKRQIFMVDRFGLVMDT-MDGLRDFQQALAQKTSDLNAWEYSGEYPSLLDVMHCAEPDILIGVS 387          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_SHEFN (NAD-dependent malic enzyme OS=Shewanella frigidimarina (strain NCIMB 400) GN=sfcA PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.932e-14
Identity = 53/151 (35.10%), Postives = 74/151 (49.01%), Query Frame = 3
Query:   24 LIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK---------PWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            LIQFEDFA  NA  LL +Y   +  FNDDIQ                    L+E R  FLGAG AG GIAE I   +  +  +  ++ R ++ +VD  GL++ +  + L   +K          W +  + + +LLD V   KPT+LIG S
Sbjct:  239 LIQFEDFAQKNAMPLLERYKDQYCSFNDDIQGTAAVTVGSLLAACKAANSKLSEQRITFLGAGSAGCGIAEAIVATMVSEGISD-QQARSQVFMVDRWGLLLDNMPNLLPFQQKLAQPCATIEAWDNYSDNI-SLLDVVNNAKPTVLIGVS 387          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_SHEDO (NAD-dependent malic enzyme OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=sfcA PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.932e-14
Identity = 53/152 (34.87%), Postives = 75/152 (49.34%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK---------PWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            VLIQFEDFA  NA  LL +Y   +  FNDDIQ                    L++ R +FLGAG AG GIAE I  ++  +  +   + R ++ +VD  GL+  +  + L   +K          W  E + V +LL+ +   KPT+LIG S
Sbjct:  238 VLIQFEDFAQRNAMPLLERYKDQYCCFNDDIQGTAAVTVGSLLAASKAANTQLSKQRVVFLGAGSAGCGIAEAIVAQMISEGISEA-QARSQVFMVDRLGLLQDNTANLLPFQQKLAQSSATVSQWHIEGDSV-SLLNVINNAKPTVLIGVS 387          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_ERWT9 (NAD-dependent malic enzyme OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=sfcA PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.932e-14
Identity = 53/152 (34.87%), Postives = 76/152 (50.00%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVN---------NLLDAVKVIKPTILIGSS 449
            VL+QFEDFA  NA  LL +Y      FNDDIQ                    L E + +FLGAG AG GIAE I  ++  +  +  EE R ++ +VD  GL+ + R  +L +F+     + + ++         +LLD V+  KP I+IG S
Sbjct:  241 VLLQFEDFAQKNAMPLLERYRDEVCCFNDDIQGTAAVTLGTLIAASRAAGGKLCEQKVVFLGAGSAGCGIAEQIIAQMKSEGLSD-EEARARVFMVDRFGLL-TDRLPNLLNFQSRLVQKSDSLSGWDSANDSLSLLDVVRNAKPDIMIGVS 390          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_PSEU2 (NAD-dependent malic enzyme OS=Pseudomonas syringae pv. syringae (strain B728a) GN=sfcA PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 5.135e-14
Identity = 57/155 (36.77%), Postives = 74/155 (47.74%), Query Frame = 3
Query:   21 VLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAE--LIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK----------PWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            VL+QFEDFA  NA  LL KY      FNDDIQ                   TL + + +F+GAG AG GIAE  + A+ I   +++   E RK+I +VD  GL+  S  D+L  F+K           W    E    LLD V     T++IG S
Sbjct:  238 VLLQFEDFAQSNAMPLLEKYRDELCCFNDDIQGTASVAVGTLLAACKAKNETLGQQKVVFVGAGSAGCGIAEHIIAAMRIEGLSES---EARKRIFMVDRFGLLTES-MDNLLDFQKRLAQKTADVSGWTAGSEAFPQLLDVVTHAGATVMIGVS 388          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAO1_ALISL (NAD-dependent malic enzyme OS=Aliivibrio salmonicida (strain LFI1238) GN=sfcA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 5.135e-14
Identity = 53/153 (34.64%), Postives = 72/153 (47.06%), Query Frame = 3
Query:   18 KVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK---------KPWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            + L+QFEDFA  NA  LL +Y      FNDDIQ                   +LA+ R  FLGAG AG GIAE I  ++  +  +   + R ++ +VD  GL+     + L   +         K W  E EP  +L D +   KPT+LIG S
Sbjct:  237 QALVQFEDFAQKNAMPLLERYKNRICCFNDDIQGTAAVTVGSLLAACKAAGSSLAQQRVTFLGAGSAGCGIAEAIIAQMVSEGISDA-QARSQVYMVDRWGLLQEGMPNLLDFQQRLVQKAENTKEWVSE-EPNYSLFDVMHNAKPTVLIGVS 387          
The following BLAST results are available for this feature:
BLAST of CF504071 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
MAO1_ENTS81.765e-1435.26NAD-dependent malic enzyme OS=Enterobacter sakazak... [more]
MAO1_VIBF12.305e-1434.64NAD-dependent malic enzyme OS=Vibrio fischeri (str... [more]
MAO1_VIBFM3.010e-1434.64NAD-dependent malic enzyme OS=Vibrio fischeri (str... [more]
MAO1_SHESH3.010e-1435.10NAD-dependent malic enzyme OS=Shewanella sediminis... [more]
MAO1_IDILO3.010e-1433.55NAD-dependent malic enzyme OS=Idiomarina loihiensi... [more]
MAO1_SHEFN3.932e-1435.10NAD-dependent malic enzyme OS=Shewanella frigidima... [more]
MAO1_SHEDO3.932e-1434.87NAD-dependent malic enzyme OS=Shewanella denitrifi... [more]
MAO1_ERWT93.932e-1434.87NAD-dependent malic enzyme OS=Erwinia tasmaniensis... [more]
MAO1_PSEU25.135e-1436.77NAD-dependent malic enzyme OS=Pseudomonas syringae... [more]
MAO1_ALISL5.135e-1434.64NAD-dependent malic enzyme OS=Aliivibrio salmonici... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-559 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-13_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504071 ID=CF504071; Name=CF504071; organism=Citrus sinensis; type=EST; length=451bp
AGCAAAATTATGGAGAAAAAGTTCTTATACAGTTTGAGGATTTCGCAAAC
CACAATGCTTTTGAGTTGCTTGCAAAATATGGCACAACTCATCTTGTCTT
CAATGATGATATACAGGGTACAGCGTCTGTTGTTCTTGCTGGGGTAGTTG
CAGCACTGAAGTTGATTGGTGGCACACTGGCCGAGCATAGATTTTTGTTT
CTTGGAGCTGGGGAGGCTGGGACTGGTATAGCTGAACTTATTGCGCTTGA
GATATCAAAGCAGACTAAAGCTCCTGTGGAAGAGACCCGGAAGAAGATAT
GTCTTGTAGACTCAAAGGGACTGATAGTCAGCTCCCGGAAAGATTCACTT
CAACACTTCAAGAAGCCTTGGGCTCATGAACATGAGCCTGTCAACAATCT
CTTAGATGCTGTCAAGGTAATCAAGCCAACAATTTTGATTGGATCATCTG
G
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