CF504078
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: IDH3G_MACFA (Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial (Fragment) OS=Macaca fascicularis GN=IDH3G PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.577e-29 Identity = 55/96 (57.29%), Postives = 75/96 (78.12%), Query Frame = 3 Query: 48 FHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG 335 F A+ GR++V+A+HKANIM+ DGLFL+CCREVA +YP+IT+E +++DN M LV P FDV+VMPNLYG+I++++CAGL+GG GL N G Sbjct: 167 FKLAQESGRKKVTAVHKANIMKLGDGLFLQCCREVAARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVGGPGLVAGANYG 262
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: IDH3G_HUMAN (Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial OS=Homo sapiens GN=IDH3G PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.577e-29 Identity = 55/96 (57.29%), Postives = 75/96 (78.12%), Query Frame = 3 Query: 48 FHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG 335 F A+ GR++V+A+HKANIM+ DGLFL+CCREVA +YP+IT+E +++DN M LV P FDV+VMPNLYG+I++++CAGL+GG GL N G Sbjct: 205 FKLAQESGRKKVTAVHKANIMKLGDGLFLQCCREVAARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVGGPGLVAGANYG 300
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_ARCFU (3-isopropylmalate dehydrogenase OS=Archaeoglobus fulgidus GN=leuB PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 4.672e-29 Identity = 58/97 (59.79%), Postives = 73/97 (75.26%), Query Frame = 3 Query: 48 FHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGE 338 F AK GR++V+A+HKAN+M+KT GLF CREVA+ YPEI Y + ID CM LV +P FDV+V N++GDI+SDL AGL+GGLGL PS N+GE Sbjct: 149 FELAKREGRKKVTALHKANVMKKTCGLFRDVCREVAKDYPEIQYNDYYIDAACMYLVMDPFRFDVIVTTNMFGDIVSDLAAGLVGGLGLAPSANVGE 245
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: IDH3G_RAT (Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial OS=Rattus norvegicus GN=Idh3g PE=2 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 7.969e-29 Identity = 54/96 (56.25%), Postives = 75/96 (78.12%), Query Frame = 3 Query: 48 FHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG 335 F A+ GR++V+A+HKANIM+ DGLFL+CCREVA +YP+IT++ +++DN M LV P FDV+VMPNLYG+I++++CAGL+GG GL N G Sbjct: 205 FKLAQESGRKKVTAVHKANIMKLGDGLFLQCCREVAARYPQITFDSMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVGGPGLVAGANYG 300
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: IDH2_ARATH (Isocitrate dehydrogenase [NAD] regulatory subunit 2, mitochondrial OS=Arabidopsis thaliana GN=IDH2 PE=1 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 1.359e-28 Identity = 52/96 (54.17%), Postives = 73/96 (76.04%), Query Frame = 3 Query: 48 FHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG 335 F YA + R++V+A+HKANIM+ DGLFL+ C+EVA+KYP I Y E+++DNCCM LV P FDV+V PNLYG+++++ AG+ GG G+ P N+G Sbjct: 185 FEYAYLNNRKKVTAVHKANIMKLADGLFLESCQEVAKKYPSIAYNEIIVDNCCMQLVARPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVG 280
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: IDH3G_MOUSE (Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial OS=Mus musculus GN=Idh3g PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.775e-28 Identity = 54/96 (56.25%), Postives = 74/96 (77.08%), Query Frame = 3 Query: 48 FHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG 335 F A+ GR++V+A+HKANIM+ DGLFL+CCREVA YP+IT++ +++DN M LV P FDV+VMPNLYG+I++++CAGL+GG GL N G Sbjct: 205 FKLAQESGRKKVTAVHKANIMKLGDGLFLQCCREVAAHYPQITFDSMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVGGPGLVAGANYG 300
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: IDH2_SCHPO (Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial OS=Schizosaccharomyces pombe GN=idh2 PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 3.028e-28 Identity = 54/103 (52.43%), Postives = 77/103 (74.76%), Query Frame = 3 Query: 33 LLNMPFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFD--VLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG 335 ++ F YA+ G+ ++ +HKA IM+ DGLFL+C +E+A +YP+I E ++DN C+ +V +P ++ V+VMPNLYGDI+SD+CAGLIGGLGLTPS NIG Sbjct: 192 VIRYAFQYARQTGKNNITVVHKATIMRMADGLFLECAKELAPEYPDIELREEILDNACLKIVTDPVPYNNTVMVMPNLYGDIVSDMCAGLIGGLGLTPSGNIG 294
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: IDH3_ARATH (Isocitrate dehydrogenase [NAD] regulatory subunit 3, mitochondrial OS=Arabidopsis thaliana GN=IDH3 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 6.746e-28 Identity = 53/96 (55.21%), Postives = 72/96 (75.00%), Query Frame = 3 Query: 48 FHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG 335 F YA + R++V+A+HKANIM+ DGLFL+ CREVA+ Y ITY E+++DNCCM LV P FDV+V PNLYG++I++ AG+ GG G+ P N+G Sbjct: 186 FEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKHYSGITYNEIIVDNCCMQLVAKPEQFDVMVTPNLYGNLIANTAAGIAGGTGVMPGGNVG 281
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: IDH3B_CAEEL (Probable isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Caenorhabditis elegans GN=C37E2.1 PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.503e-27 Identity = 54/96 (56.25%), Postives = 73/96 (76.04%), Query Frame = 3 Query: 48 FHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG 335 F YA GR++V+A+HKANIM+ DGLFL+ C VA++YP+I +E ++IDN CM LV P FDV+VMPNLYG+II +L AGL+GG G+ P ++G Sbjct: 199 FDYATKTGRKKVTAVHKANIMKLGDGLFLRTCEGVAKQYPKIQFESMIIDNTCMQLVSKPEQFDVMVMPNLYGNIIDNLAAGLVGGAGVVPGQSVG 294
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: IDH1_AJECA (Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial OS=Ajellomyces capsulata GN=IDH1 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.235e-22 Identity = 46/96 (47.92%), Postives = 65/96 (67.71%), Query Frame = 3 Query: 48 FHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG 335 F +A + R++V+ IHKANIM+ DGLF +VAE YP + ++++DN M V P FDV+VMPNLYG I+S++ A L+GG G+ P CN+G Sbjct: 206 FSFALANNRKKVTCIHKANIMKLADGLFRSTFHKVAESYPTLETNDMIVDNASMQAVARPQQFDVMVMPNLYGGILSNVGAALVGGPGIVPGCNMG 301 The following BLAST results are available for this feature:
BLAST of CF504078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 287
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504078 ID=CF504078; Name=CF504078; organism=Citrus sinensis; type=EST; length=363bpback to top |