CF504078
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_DEIGD (3-isopropylmalate dehydrogenase OS=Deinococcus geothermalis (strain DSM 11300) GN=leuB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.972e-11 Identity = 33/97 (34.02%), Postives = 63/97 (64.95%), Query Frame = 3 Query: 54 YAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEK-YPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEG 341 +A R RV+++ KAN+++ ++ L+ + + + ++ Y + +D+ M++V NP+ +DV++ NL+GDI+SDL A + G LGL PS ++G+G Sbjct: 171 WAAEQRRGRVTSVDKANVLEVSE-LWRRDVQALRDREYRNVHLNHEYVDSVAMLIVANPSRYDVILTENLFGDILSDLAAVIPGSLGLMPSASLGDG 266
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU31_DECAR (3-isopropylmalate dehydrogenase 1 OS=Dechloromonas aromatica (strain RCB) GN=leuB1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.972e-11 Identity = 32/95 (33.68%), Postives = 57/95 (60.00%), Query Frame = 3 Query: 75 ERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 +R+ ++ K N+++ T L+ E++ YP++ +++DN M LVK P FDV+V N++GDI+SD + L G +G+ PS ++ + L E Sbjct: 178 KRLCSVDKMNVLECTQ-LWRDVMIEISRDYPDVELSHMLVDNAAMQLVKAPKQFDVMVTGNMFGDILSDEASMLTGSIGMLPSASLDDKNKGLYE 271
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_PROMM (3-isopropylmalate dehydrogenase OS=Prochlorococcus marinus (strain MIT 9313) GN=leuB PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.576e-11 Identity = 34/94 (36.17%), Postives = 55/94 (58.51%), Query Frame = 3 Query: 78 RVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 ++ ++ KAN++ + L+ +A Y ++ + +DN M LV+NP FDVL+ NL+GDI+SD A L G +G+ PS ++G G L E Sbjct: 186 KLCSVDKANVLDVSQ-LWRDRVDALAANYGDVELSHMYVDNAAMQLVRNPRQFDVLLTGNLFGDILSDEAAMLTGSIGMLPSASLGSEGPGLFE 278
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: IDH_STRMU (Isocitrate dehydrogenase [NADP] OS=Streptococcus mutans GN=icd PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 2.576e-11 Identity = 37/118 (31.36%), Postives = 63/118 (53.39%), Query Frame = 3 Query: 33 LLNMPFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKY-------PEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG-EGGIALAEA 362 L+ YA + +V+ +HK NI + T+G F K E+A++ ++ ++++ DN ++ P FDV+ + NL GD SD A +GG+G++P NI + G A+ EA Sbjct: 198 LIRAAIEYALANNLTKVTLVHKGNIQKFTEGGFRKWGYELAKREYAAELASGQLVVDDIIADNFLQQILLKPERFDVVALTNLNGDYASDALAAQVGGIGISPGANINYQTGHAIFEA 315
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_PROMP (3-isopropylmalate dehydrogenase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=leuB PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.364e-11 Identity = 31/95 (32.63%), Postives = 57/95 (60.00%), Query Frame = 3 Query: 75 ERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 +++ ++ K+N+++ + L+ VA K ++ + +DN M LVK+P FDV++ NL+GDI+SDL A + G +G+ PS ++ G + E Sbjct: 185 KKICSVDKSNVLEVSQ-LWRDTVSLVASKENDLALSNMYVDNAAMQLVKDPGQFDVILTSNLFGDILSDLAAMITGSIGMLPSASLSNSGPGVFE 278
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_SYNSC (3-isopropylmalate dehydrogenase OS=Synechococcus sp. (strain CC9605) GN=leuB PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.393e-11 Identity = 35/96 (36.46%), Postives = 55/96 (57.29%), Query Frame = 3 Query: 72 RERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 R R+ ++ KAN++ + L+ +A Y + + +DN M LV++P FDVL+ NL+GDI+SD A L G +G+ PS ++G G L E Sbjct: 184 RGRLCSVDKANVLDVSQ-LWRDRVDAMAPSYGPVEVSHMYVDNAAMQLVRDPRQFDVLLTGNLFGDILSDEAAMLTGSIGMLPSASLGSEGPGLFE 278
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_BRANA (3-isopropylmalate dehydrogenase, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.393e-11 Identity = 30/96 (31.25%), Postives = 58/96 (60.42%), Query Frame = 3 Query: 72 RERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 R ++ ++ KAN++ + L+ + +A +YP++ + +DN M LV++P FD +V N++GDI+SD + + G +G+ PS ++ + G L E Sbjct: 225 RGKLCSVDKANVLDASI-LWRRRVTALAAEYPDVELSHMYVDNAAMQLVRDPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLSDSGPGLFE 319 The following BLAST results are available for this feature:
BLAST of CF504078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 287
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504078 ID=CF504078; Name=CF504078; organism=Citrus sinensis; type=EST; length=363bpback to top |