CF504078
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_METTH (3-isopropylmalate dehydrogenase OS=Methanobacterium thermoautotrophicum GN=leuB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.225e-22 Identity = 47/97 (48.45%), Postives = 66/97 (68.04%), Query Frame = 3 Query: 48 FHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGE 338 F YA+ G ++V+A+HKAN+++KTDG+F +VA +YP++ + +D M L+ P F +V NL+GDI+SD AGLIGGLGL PS NIGE Sbjct: 151 FQYAQKEGMQKVTAVHKANVLKKTDGIFRDEFYKVASEYPQMEATDYYVDATAMYLITQPQEFQTIVTTNLFGDILSDEAAGLIGGLGLAPSANIGE 247
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: AKSF_METJA (Homoisocitrate dehydrogenase OS=Methanocaldococcus jannaschii GN=aksF PE=1 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 2.745e-21 Identity = 47/102 (46.08%), Postives = 71/102 (69.61%), Query Frame = 3 Query: 33 LLNMPFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGE 338 ++ F YA + R++VS IHKAN+++ TDGLFL+ E+ + Y I ++ ++D+ M L+K+P FDV+V N++GDI+SD + LIGGLGL PS NIG+ Sbjct: 160 IIRFAFEYAIKNNRKKVSCIHKANVLRITDGLFLEVFNEIKKHY-NIEADDYLVDSTAMNLIKHPEKFDVIVTTNMFGDILSDEASALIGGLGLAPSANIGD 260
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: IDH2_YEAST (Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial OS=Saccharomyces cerevisiae GN=IDH2 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.116e-21 Identity = 50/104 (48.08%), Postives = 71/104 (68.27%), Query Frame = 3 Query: 33 LLNMPFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFD--VLVMPNLYGDIISDLCAGL-IGGLGLTPSCNIG 335 ++ F YA+ GR RV +HK+ I + DGLF+ +E++++YP++T E +IDN + +V NP+A+ V V PNLYGDI+SDL +GL G LGLTPS NIG Sbjct: 183 VIRYAFEYARAIGRPRVIVVHKSTIQRLADGLFVNVAKELSKEYPDLTLETELIDNSVLKVVTNPSAYTDAVSVCPNLYGDILSDLNSGLSAGSLGLTPSANIG 286
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: IDH1_SCHPO (Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial OS=Schizosaccharomyces pombe GN=idh1 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.779e-20 Identity = 46/96 (47.92%), Postives = 64/96 (66.67%), Query Frame = 3 Query: 48 FHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG 335 F +A +GR+ V+ IHKANIM+ DGLF + +VA Y IT +++++DN M V P FDVLVMPNLYG I+S++ + L+GG G+ P N G Sbjct: 175 FDFALQNGRKSVTCIHKANIMKLADGLFRRTFYDVANGYDAITPKDLIVDNASMQAVSRPQQFDVLVMPNLYGSILSNIGSALVGGPGVIPGANFG 270
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: IDH_THET8 (Isocitrate dehydrogenase [NADP] OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=icd PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 6.762e-20 Identity = 46/111 (41.44%), Postives = 70/111 (63.06%), Query Frame = 3 Query: 30 ELLNMPFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEA 362 +++ F A+ GR++V K+NIM+ +G + +VA++YP+I +++DN LVK P F+V+V N+ GDI+SDL +GLIGGLG PS NIG +A+ EA Sbjct: 169 KIVRFAFELARAEGRKKVHCATKSNIMKLAEGTLKRAFEQVAQEYPDIEAVHIIVDNAAHQLVKRPEQFEVIVTTNMNGDILSDLTSGLIGGLGFAPSANIG-NEVAIFEA 278
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LYS12_YEAST (Homoisocitrate dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=LYS12 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.831e-20 Identity = 44/104 (42.31%), Postives = 67/104 (64.42%), Query Frame = 3 Query: 36 LNMPFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAE----KYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG 335 L++ +T G+ ++ HK+N++ ++DGLF + C+EV E KY +I Y E ++D+ L + P FDV+V PNLYGDI+SD A L+G LG+ PS N+G Sbjct: 186 LDIALKRLQTRGQATLTVTHKSNVLSQSDGLFREICKEVYESNKDKYGQIKYNEQIVDSMVYRLFREPQCFDVIVAPNLYGDILSDGAAALVGSLGVVPSANVG 289
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_METJA (3-isopropylmalate/3-methylmalate dehydrogenase OS=Methanocaldococcus jannaschii GN=leuB PE=1 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 3.356e-19 Identity = 47/94 (50.00%), Postives = 64/94 (68.09%), Query Frame = 3 Query: 60 KTHGRE-RVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGE 338 K G+E +V+ HKAN+++ TDGLF K +VAE+Y +I E+ ID M ++ P FDV+V NL+GDI+SD AG +GGLGL PS NIG+ Sbjct: 157 KKMGKEGKVTCAHKANVLKLTDGLFKKIFYKVAEEYDDIKAEDYYIDAMNMYIITKPQVFDVVVTSNLFGDILSDGAAGTVGGLGLAPSANIGD 250
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: IDH1_KLULA (Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial OS=Kluyveromyces lactis GN=IDH1 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.383e-19 Identity = 45/97 (46.39%), Postives = 61/97 (62.89%), Query Frame = 3 Query: 48 FHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREV-AEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG 335 F +A + R+ V A+HKANIM+ DGLF E+ A +YPE+ + +++DN M V P FDVLV PNLYG I+ ++ + LIGG GL P N G Sbjct: 179 FDFALKNNRKSVCAVHKANIMKLGDGLFRNTVNEIGANEYPELDVKNIIVDNASMQAVAKPHQFDVLVTPNLYGSILGNIGSALIGGPGLVPGANFG 275
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_SULSO (3-isopropylmalate dehydrogenase OS=Sulfolobus solfataricus GN=leuB PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.724e-19 Identity = 44/102 (43.14%), Postives = 68/102 (66.67%), Query Frame = 3 Query: 33 LLNMPFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGE 338 ++N+ +YA R +V+ +HKAN+M+ TDGLF CRE+ + ++ +EE+ +D LV++P FDV+V N+YGDI+SD + + G LGL PS NIG+ Sbjct: 150 IVNVALNYALMR-RRKVTCVHKANVMRVTDGLFASVCREILKG--KVNFEEMYVDAAAANLVRDPTRFDVIVTSNVYGDILSDEASQIAGSLGLAPSANIGD 248
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: IDH_RICBR (Isocitrate dehydrogenase [NADP] OS=Rickettsia bellii (strain RML369-C) GN=icd PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.275e-18 Identity = 45/103 (43.69%), Postives = 65/103 (63.11%), Query Frame = 3 Query: 30 ELLNMPFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGE 338 +++ F YA + R++V+ + K NIM+ +DG+F K E+A++YP+I E +ID L P FDV+V NLYGDIISD+ A + G +GL S NIGE Sbjct: 153 KIIRYAFEYAVKNNRKKVTCLSKDNIMKFSDGIFHKVFNEIAKEYPQINNEHYIIDIGTARLATKPEIFDVIVTSNLYGDIISDVAAEISGSVGLAGSANIGE 255 The following BLAST results are available for this feature:
BLAST of CF504078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 287
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504078 ID=CF504078; Name=CF504078; organism=Citrus sinensis; type=EST; length=363bpback to top |