CF504078
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_ECO57 (3-isopropylmalate dehydrogenase OS=Escherichia coli O157:H7 GN=leuB PE=3 SV=3) HSP 1 Score: 85.8853 bits (211), Expect = 6.998e-17 Identity = 41/96 (42.71%), Postives = 64/96 (66.67%), Query Frame = 3 Query: 72 RERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 R +V++I KAN++Q + L+ + E+A +YP+I + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E Sbjct: 187 RHKVTSIDKANVLQSSI-LWREIVNEIATEYPDIELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYE 281
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_COLP3 (3-isopropylmalate dehydrogenase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=leuB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 6.998e-17 Identity = 38/94 (40.43%), Postives = 63/94 (67.02%), Query Frame = 3 Query: 78 RVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 +V+++ KAN++ T L+ + EVA +YP++ E + +DN M LV++P FDV++ PNL+GDI+SD+CA + G +GL PS ++ G + E Sbjct: 186 KVTSVDKANVLA-TSQLWRQVVEEVAVEYPDVELEHLYVDNAAMQLVRDPNQFDVMLCPNLFGDILSDICAMITGSMGLLPSASLNSDGFGMYE 278
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_BUCTS (3-isopropylmalate dehydrogenase OS=Buchnera aphidicola subsp. Thelaxes suberi GN=leuB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 6.998e-17 Identity = 40/96 (41.67%), Postives = 65/96 (67.71%), Query Frame = 3 Query: 72 RERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 ++++ +I KAN++ K+ L+ ++A K+P + E + IDN M L+KNP++FDV++ NL+GDIISD CA +IG +GL PS ++ + G L E Sbjct: 187 KKKIVSIDKANVL-KSSILWRDTVNKMAYKFPNVKLEHMYIDNATMELIKNPSSFDVILCSNLFGDIISDECAAIIGSIGLLPSASLNKSGFGLYE 281
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_SHISS (3-isopropylmalate dehydrogenase OS=Shigella sonnei (strain Ss046) GN=leuB PE=3 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 9.139e-17 Identity = 40/96 (41.67%), Postives = 64/96 (66.67%), Query Frame = 3 Query: 72 RERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 R +V++I KAN++Q + L+ + E+A +YP++ + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E Sbjct: 187 RHKVTSIDKANVLQSSI-LWREIVNEIATEYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYE 281
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_SHIFL (3-isopropylmalate dehydrogenase OS=Shigella flexneri GN=leuB PE=3 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 9.139e-17 Identity = 40/96 (41.67%), Postives = 64/96 (66.67%), Query Frame = 3 Query: 72 RERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 R +V++I KAN++Q + L+ + E+A +YP++ + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E Sbjct: 187 RHKVTSIDKANVLQSSI-LWREIVNEIATEYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYE 281
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_SHIDS (3-isopropylmalate dehydrogenase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=leuB PE=3 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 9.139e-17 Identity = 40/96 (41.67%), Postives = 64/96 (66.67%), Query Frame = 3 Query: 72 RERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 R +V++I KAN++Q + L+ + E+A +YP++ + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E Sbjct: 187 RHKVTSIDKANVLQSSI-LWREIVNEIATEYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYE 281
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_SHIBS (3-isopropylmalate dehydrogenase OS=Shigella boydii serotype 4 (strain Sb227) GN=leuB PE=3 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 9.139e-17 Identity = 40/96 (41.67%), Postives = 64/96 (66.67%), Query Frame = 3 Query: 72 RERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 R +V++I KAN++Q + L+ + E+A +YP++ + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E Sbjct: 187 RHKVTSIDKANVLQSSI-LWREIVNEIATEYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYE 281
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_HAEIN (3-isopropylmalate dehydrogenase OS=Haemophilus influenzae GN=leuB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.139e-17 Identity = 40/95 (42.11%), Postives = 65/95 (68.42%), Query Frame = 3 Query: 75 ERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 ++V+++ KAN++Q + L+ + E+A+ YPE+T E + IDN M L+K+P +FDVL+ N++GDIISD A + G +G+ PS ++ E G L E Sbjct: 187 KKVTSVDKANVLQSSI-LWRETVTEMAKDYPEVTLEHIYIDNATMQLIKSPESFDVLLCSNIFGDIISDEAAMITGSMGMLPSASLNEEGFGLYE 280
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_ECOUT (3-isopropylmalate dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=leuB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.139e-17 Identity = 40/96 (41.67%), Postives = 64/96 (66.67%), Query Frame = 3 Query: 72 RERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 R +V++I KAN++Q + L+ + E+A +YP++ + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E Sbjct: 188 RHKVTSIDKANVLQSSI-LWREIVNEIATEYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYE 282
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_ECOLI (3-isopropylmalate dehydrogenase OS=Escherichia coli (strain K12) GN=leuB PE=1 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 9.139e-17 Identity = 40/96 (41.67%), Postives = 64/96 (66.67%), Query Frame = 3 Query: 72 RERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 R +V++I KAN++Q + L+ + E+A +YP++ + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E Sbjct: 187 RHKVTSIDKANVLQSSI-LWREIVNEIATEYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYE 281 The following BLAST results are available for this feature:
BLAST of CF504078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 287
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504078 ID=CF504078; Name=CF504078; organism=Citrus sinensis; type=EST; length=363bpback to top |