CF504078
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_ECOL6 (3-isopropylmalate dehydrogenase OS=Escherichia coli O6 GN=leuB PE=3 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 9.139e-17 Identity = 40/96 (41.67%), Postives = 64/96 (66.67%), Query Frame = 3 Query: 72 RERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 R +V++I KAN++Q + L+ + E+A +YP++ + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E Sbjct: 187 RHKVTSIDKANVLQSSI-LWREIVNEIATEYPDVELTHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYE 281
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_THETN (3-isopropylmalate dehydrogenase OS=Thermoanaerobacter tengcongensis GN=leuB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.194e-16 Identity = 37/96 (38.54%), Postives = 65/96 (67.71%), Query Frame = 3 Query: 72 RERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 R++++++ KAN+++ + L+ K EVA++YPE+ + +DNC M LVKNP FDV++ N++GDI+SD A ++G +G+ PS ++ + L E Sbjct: 182 RKKITSVDKANVLESSR-LWRKTVEEVAKRYPEVELNHMYVDNCAMQLVKNPFQFDVILTNNMFGDILSDEAAQIVGSIGILPSASLRGDRVGLYE 276
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_HAEI8 (3-isopropylmalate dehydrogenase OS=Haemophilus influenzae (strain 86-028NP) GN=leuB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.194e-16 Identity = 40/95 (42.11%), Postives = 64/95 (67.37%), Query Frame = 3 Query: 75 ERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 ++V+++ KAN++Q + L+ + E+A+ YPE+T E + IDN M L+K P +FDVL+ N++GDIISD A + G +G+ PS ++ E G L E Sbjct: 187 KKVTSVDKANVLQSSI-LWRETVTEMAKDYPEVTLEHIYIDNATMQLIKAPESFDVLLCSNIFGDIISDEAAMITGSMGMLPSASLNEAGFGLYE 280
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_SALTY (3-isopropylmalate dehydrogenase OS=Salmonella typhimurium GN=leuB PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 1.559e-16 Identity = 40/96 (41.67%), Postives = 64/96 (66.67%), Query Frame = 3 Query: 72 RERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 R +V++I KAN++Q + L+ + +VA+ YP++ + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E Sbjct: 187 RRKVTSIDKANVLQSSI-LWREIVNDVAKTYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYE 281
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_SALPA (3-isopropylmalate dehydrogenase OS=Salmonella paratyphi A GN=leuB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.559e-16 Identity = 40/96 (41.67%), Postives = 64/96 (66.67%), Query Frame = 3 Query: 72 RERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 R +V++I KAN++Q + L+ + +VA+ YP++ + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E Sbjct: 187 RRKVTSIDKANVLQSSI-LWREIVNDVAKTYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYE 281
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_SALCH (3-isopropylmalate dehydrogenase OS=Salmonella choleraesuis GN=leuB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.559e-16 Identity = 40/96 (41.67%), Postives = 64/96 (66.67%), Query Frame = 3 Query: 72 RERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 R +V++I KAN++Q + L+ + +VA+ YP++ + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E Sbjct: 187 RRKVTSIDKANVLQSSI-LWREIVNDVAKTYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYE 281
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: IDH_RICCN (Isocitrate dehydrogenase [NADP] OS=Rickettsia conorii GN=icd PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.559e-16 Identity = 42/103 (40.78%), Postives = 62/103 (60.19%), Query Frame = 3 Query: 30 ELLNMPFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGE 338 +++ F YA + R++V + K NIM+ +DG+ K E+A++YP+I +ID L P FDV+V NLYGDIISD+ A + G +GL S NIG+ Sbjct: 153 KIIRYAFEYAVKNNRKKVMCLSKDNIMKFSDGVLHKVFNEIAKEYPQINNAHYIIDIGTARLATKPEIFDVIVTSNLYGDIISDVAAEISGSVGLAGSANIGQ 255
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_MANSM (3-isopropylmalate dehydrogenase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=leuB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.036e-16 Identity = 40/96 (41.67%), Postives = 65/96 (67.71%), Query Frame = 3 Query: 72 RERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 R++V+++ KAN++Q + L+ + E+A++YPE+ E + IDN M L+K P +FDVL+ N++GDIISD A + G +G+ PS ++ E G L E Sbjct: 186 RKQVTSVDKANVLQSSI-LWRETVAEIAKEYPEVQVENMYIDNATMQLIKAPESFDVLLCSNIFGDIISDEAAMITGSMGMLPSASLNEEGFGLYE 280
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_VIBVY (3-isopropylmalate dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=leuB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.473e-16 Identity = 39/96 (40.62%), Postives = 63/96 (65.62%), Query Frame = 3 Query: 72 RERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 R++V +I KAN++Q + L+ + E+A+ YP++ + IDN M L+K+PA FDV++ N++GDIISD CA + G +G+ PS ++ E L E Sbjct: 188 RKKVCSIDKANVLQSSI-LWREVVEEIAKDYPDVELSHMYIDNATMQLIKDPAQFDVMLCSNIFGDIISDECAMITGSMGMLPSASLNESKFGLYE 282
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_VIBPA (3-isopropylmalate dehydrogenase OS=Vibrio parahaemolyticus GN=leuB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.473e-16 Identity = 39/96 (40.62%), Postives = 63/96 (65.62%), Query Frame = 3 Query: 72 RERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 R++V +I KAN++Q + L+ + E+A+ YP++ + IDN M L+K+PA FDV++ N++GDIISD CA + G +G+ PS ++ E L E Sbjct: 188 RKKVCSIDKANVLQSSI-LWREVVEEIAKDYPDVELSHMYIDNATMQLIKDPAQFDVMLCSNIFGDIISDECAMITGSMGMLPSASLNESKFGLYE 282 The following BLAST results are available for this feature:
BLAST of CF504078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 287
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504078 ID=CF504078; Name=CF504078; organism=Citrus sinensis; type=EST; length=363bpback to top |