CF504078
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_BUCAP (3-isopropylmalate dehydrogenase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=leuB PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.737e-16 Identity = 39/109 (35.78%), Postives = 68/109 (62.39%), Query Frame = 3 Query: 33 LLNMPFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 + N+ F A + R +V +I KAN+++ + L+ + ++V++ YP++ + IDN CM ++KNP FD+L+ N++GDIISD CA + G +G+ PS ++ L E Sbjct: 175 IANLAFELASSR-RCKVCSIDKANVLESSV-LWREIVKKVSKNYPDVHLSHLYIDNACMQIIKNPTQFDILLCSNIFGDIISDECAMITGSIGMLPSASLNNQKFGLYE 281
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: DLPA_LEGPH (Protein dlpA OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=dlpA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.737e-16 Identity = 39/104 (37.50%), Postives = 64/104 (61.54%), Query Frame = 3 Query: 33 LLNMPFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGG 344 L + F +A G RV+ K N+++++ K A++YP+I + + +D + L+K+P F V+V N++GDI+SD+ AG++GGLGL PS NIG+ G Sbjct: 185 LFDFAFKHAMQTGMPRVTLADKPNVLRESGEFTRKIFESTAQRYPKIQADILNVDAVALWLIKSPEKFGVIVAENMFGDILSDVGAGVMGGLGLAPSANIGDKG 288
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_PHOLL (3-isopropylmalate dehydrogenase OS=Photorhabdus luminescens subsp. laumondii GN=leuB PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.010e-15 Identity = 37/94 (39.36%), Postives = 63/94 (67.02%), Query Frame = 3 Query: 78 RVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 +V++I KAN++Q + L+ + E+A+ YP++ + IDN M L+K+P+ FDV++ N++GDI+SD CA + G +G+ PS ++ E G L E Sbjct: 189 KVTSIDKANVLQSSV-LWREVVTEIAKAYPDVEINHMYIDNATMQLIKDPSQFDVMLCSNIFGDILSDECAMITGSMGMLPSASLNEKGFGLYE 281
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_SALTI (3-isopropylmalate dehydrogenase OS=Salmonella typhi GN=leuB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.320e-15 Identity = 39/96 (40.62%), Postives = 63/96 (65.62%), Query Frame = 3 Query: 72 RERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 R +V++I KAN++Q + L+ + +VA+ YP++ + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E L E Sbjct: 187 RRKVTSIDKANVLQSSI-LWREIVNDVAKAYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQEFGLYE 281
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_PSEHT (3-isopropylmalate dehydrogenase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=leuB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.320e-15 Identity = 38/93 (40.86%), Postives = 61/93 (65.59%), Query Frame = 3 Query: 81 VSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 V+++ KAN++ + L+ + EV++ YPE+ + + +DN M LVK P+ FDVL+ NL+GDI+SD CA + G +GL PS ++ + G L E Sbjct: 190 VTSVDKANVLASSV-LWREVVTEVSKDYPEVKLDYIYVDNAAMQLVKQPSQFDVLLCDNLFGDILSDECAMITGSMGLLPSASLNQSGFGLYE 281
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_PASMU (3-isopropylmalate dehydrogenase OS=Pasteurella multocida GN=leuB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.320e-15 Identity = 39/95 (41.05%), Postives = 62/95 (65.26%), Query Frame = 3 Query: 75 ERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 + V+++ KAN++ + L+ + +VA+ YPE+T + + IDN M L+K P FDVL+ N++GDIISD CA + G +G+ PS ++ E G L E Sbjct: 187 KHVTSVDKANVLISSV-LWREVVCDVAKDYPEVTLDHIYIDNATMQLIKQPEFFDVLLCSNIFGDIISDECAMITGSMGMLPSASLNEKGFGLYE 280
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_CHLTE (3-isopropylmalate dehydrogenase OS=Chlorobium tepidum GN=leuB PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.724e-15 Identity = 37/101 (36.63%), Postives = 63/101 (62.38%), Query Frame = 3 Query: 33 LLNMPFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG 335 + + F YA+ G +V++I KAN+++ + + EV + +PEI ++ +DN M +V+NP F+V+V NL+GDI+SD+ + G LG+ PS +IG Sbjct: 167 IARLAFEYAQKRGNAKVTSIDKANVLEVSQ-FWRNIVHEVHQDFPEIELVDMYVDNAAMQVVRNPKQFEVIVTSNLFGDILSDISGMITGSLGMLPSASIG 266
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_AQUAE (3-isopropylmalate dehydrogenase OS=Aquifex aeolicus GN=leuB PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.724e-15 Identity = 35/89 (39.33%), Postives = 60/89 (67.42%), Query Frame = 3 Query: 72 RERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGE 338 R++++++ KAN+++ L+ + E E YP++ E + IDNC M LV+ P +FDV+V N++GDI+SD ++G LG+ PS +IG+ Sbjct: 184 RKKLTSVDKANVLE-VSALWRQIVEEEKENYPDVELEHLYIDNCAMQLVRRPTSFDVIVTGNIFGDILSDEAGVVVGSLGMLPSASIGD 271
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_PELCD (3-isopropylmalate dehydrogenase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=leuB PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.251e-15 Identity = 42/109 (38.53%), Postives = 64/109 (58.72%), Query Frame = 3 Query: 33 LLNMPFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 + + F A+ G++ VS I KAN++ T L+ + V+ YP++ + +DN M LVK P FDVL+ PN++GDI+SD A L G LG+ PS ++ EG + E Sbjct: 175 ITRVAFDAARKRGKKLVS-IDKANVLS-TSVLWREVVERVSADYPDVVLSHMYVDNAAMQLVKAPKQFDVLLCPNMFGDILSDEAAMLTGSLGMLPSASLAEGSFGMYE 281
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_PHOPR (3-isopropylmalate dehydrogenase OS=Photobacterium profundum GN=leuB PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.940e-15 Identity = 38/95 (40.00%), Postives = 62/95 (65.26%), Query Frame = 3 Query: 75 ERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 + V +I KAN++Q + L+ + EVA+ YPE+T + IDN M L+K+P+ FDV++ N++GDIISD CA + G +G+ PS ++ + + E Sbjct: 188 KNVYSIDKANVLQSSI-LWREVVEEVAKDYPEVTLNHMYIDNATMQLIKDPSQFDVMLCSNIFGDIISDECAMITGSMGMLPSASLNQEKFGMYE 281 The following BLAST results are available for this feature:
BLAST of CF504078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 287
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504078 ID=CF504078; Name=CF504078; organism=Citrus sinensis; type=EST; length=363bpback to top |