CF504078
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_STRR6 (3-isopropylmalate dehydrogenase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=leuB PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.015e-15 Identity = 42/109 (38.53%), Postives = 68/109 (62.39%), Query Frame = 3 Query: 33 LLNMPFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 ++ F A+ R+ V++I K N++ T L+ K EVA+ +P++T E ++D+ M+++ NPA FDV+V NL+GDI+SD + L G LG+ PS + E G +L E Sbjct: 164 IIRKAFEIARNR-RKIVTSIDKQNVLA-TSKLWRKVAEEVAQDFPDVTLEHQLVDSAAMLMITNPAKFDVIVTENLFGDILSDESSVLSGTLGVMPSASHSENGPSLYE 270
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_MOOTA (3-isopropylmalate dehydrogenase OS=Moorella thermoacetica (strain ATCC 39073) GN=leuB PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.015e-15 Identity = 39/96 (40.62%), Postives = 62/96 (64.58%), Query Frame = 3 Query: 72 RERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 R ++++ KAN++ T L+ ++ ++PE+T E + +DNC M LV+ PA FDV+V N +GDI+SD + L G +G+ PS +IG G +AL E Sbjct: 182 RCHLTSVDKANVLT-TSRLWRDTVEDIKGEFPEVTVEHMYVDNCAMQLVRRPAQFDVIVTENTFGDILSDQASVLTGSIGMLPSASIG-GAVALYE 275
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_LISMO (3-isopropylmalate dehydrogenase OS=Listeria monocytogenes GN=leuB PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.015e-15 Identity = 40/109 (36.70%), Postives = 67/109 (61.47%), Query Frame = 3 Query: 33 LLNMPFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 ++ F A T + +V+++ KAN++ + L+ K EVA ++P+IT E + ID M++++ P FDV+V NL+GDI+SD + + G LG+ PS + E G +L E Sbjct: 165 IIEKAFEIAATRNK-KVTSVDKANVLASSK-LWRKIAEEVASRHPDITLEHLYIDAAAMLMIQRPTTFDVIVTENLFGDILSDEASVITGSLGMLPSASHAENGPSLYE 271
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_LISIN (3-isopropylmalate dehydrogenase OS=Listeria innocua GN=leuB PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.015e-15 Identity = 39/109 (35.78%), Postives = 67/109 (61.47%), Query Frame = 3 Query: 33 LLNMPFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 ++ F A T + +V+++ KAN++ + L+ K EVA ++P+IT E + +D M++++ P FDV+V NL+GDI+SD + + G LG+ PS + E G +L E Sbjct: 165 IIEKAFEIASTRNK-KVTSVDKANVLASSK-LWRKIAEEVASRHPDITLEHLYVDAAAMLMIQRPTTFDVIVTENLFGDILSDEASVITGSLGMLPSASHAENGPSLYE 271
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_CORA7 (3-isopropylmalate dehydrogenase OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=leuB PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.015e-15 Identity = 36/91 (39.56%), Postives = 58/91 (63.74%), Query Frame = 3 Query: 72 RERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGG 344 R+ V+ +HK N++ GL+ + EVA+++PE+T + ID + +V +PA +DV+V NL+GDI++DL + GG+GL S NI G Sbjct: 171 RKHVTLVHKTNVLVNAGGLWQRTVNEVAQEFPEVTVDYNHIDAATIYMVTDPARYDVIVTDNLFGDILTDLAGAVTGGIGLAASGNIDASG 261
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_CLAMS (3-isopropylmalate dehydrogenase OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=leuB PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.015e-15 Identity = 37/99 (37.37%), Postives = 61/99 (61.62%), Query Frame = 3 Query: 48 FHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGG 344 F A+ R+RV+ +HK N++ L+ + VA ++P++T + + +D + LV +P+ FDV+V NL+GDII+DL A + GG+GL S N+ G Sbjct: 174 FELAEKRDRKRVTLVHKTNVLTFAGSLWQRTVDRVAAEHPDVTVDYLHVDATMIFLVTDPSRFDVIVSDNLFGDIITDLAAAISGGIGLAASGNVNPTG 272
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_BUCUO (3-isopropylmalate dehydrogenase OS=Buchnera aphidicola subsp. Uroleucon obscurum GN=leuB PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.015e-15 Identity = 39/109 (35.78%), Postives = 68/109 (62.39%), Query Frame = 3 Query: 33 LLNMPFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 + ++ F A++ +V +I K+N++ + L+ + ++V++ YP++ + IDN M ++KNP FDVL+ PNL+GDIISD CA + G +G+ PS ++ E L E Sbjct: 176 IAHLAFQLAQSRSH-KVCSIDKSNVLNSSI-LWKEIVQKVSKNYPDVDLSHLYIDNAIMQIIKNPNQFDVLLCPNLFGDIISDECAIITGSIGMLPSASLNEKKFGLYE 282
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_BUCRP (3-isopropylmalate dehydrogenase OS=Buchnera aphidicola subsp. Rhopalosiphum padi GN=leuB PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.015e-15 Identity = 40/109 (36.70%), Postives = 66/109 (60.55%), Query Frame = 3 Query: 33 LLNMPFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 + ++ F A + R +V +I K+N++ + L+ + EV++ YP I + IDN CM ++KNP+ FDVL+ N++GDIISD CA + G +G+ PS ++ L E Sbjct: 175 IAHLAFELASSR-RCKVCSIDKSNVLASSI-LWREIVEEVSKNYPNIILSHLYIDNACMQIIKNPSQFDVLLCSNIFGDIISDECAMITGSIGMLPSASLNSKKFGLYE 281
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_BUCAI (3-isopropylmalate dehydrogenase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=leuB PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 5.015e-15 Identity = 39/109 (35.78%), Postives = 68/109 (62.39%), Query Frame = 3 Query: 33 LLNMPFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 + ++ F A++ +++V +I K+N++Q + L+ + V++KYP++ + IDN M ++K+P FDVL+ NL+GDIISD CA + G +G+ PS + E L E Sbjct: 175 IAHLAFKLARSR-KKKVCSIDKSNVLQSSI-LWREVVESVSKKYPDVHLSHLYIDNAAMQIIKDPNQFDVLLCSNLFGDIISDECATITGSIGMLPSASFNEKNFGLYE 281
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_METCA (3-isopropylmalate dehydrogenase OS=Methylococcus capsulatus GN=leuB PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.550e-15 Identity = 39/104 (37.50%), Postives = 64/104 (61.54%), Query Frame = 3 Query: 48 FHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 F A+ R R+ +I KAN+++ T+ L+ + EV + YP++ + +DN M LV+NP FDV++ N++GDI+SD A L G +G+ PS ++ E G + E Sbjct: 177 FQIARKRNR-RLCSIDKANVLECTE-LWREVVIEVGKDYPDVALSHMYVDNAAMQLVRNPKQFDVMLTDNMFGDILSDCAAMLTGSIGMLPSASLAESGKGMYE 278 The following BLAST results are available for this feature:
BLAST of CF504078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 287
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504078 ID=CF504078; Name=CF504078; organism=Citrus sinensis; type=EST; length=363bpback to top |