CF504079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504079 vs. ExPASy Swiss-Prot
Match: G3PC_CRAPL (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Craterostigma plantagineum GN=GAPC PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.785e-20 Identity = 46/51 (90.20%), Postives = 50/51 (98.04%), Query Frame = 2 Query: 2 VSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMA 154 VS+DFVGDSRSSIFDAKAGIALSKKFVK+V+WYDNEWGYS+RVVDLI HMA Sbjct: 284 VSSDFVGDSRSSIFDAKAGIALSKKFVKIVAWYDNEWGYSSRVVDLIRHMA 334
BLAST of CF504079 vs. ExPASy Swiss-Prot
Match: G3PC_TAXBA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Taxus baccata PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.332e-20 Identity = 45/53 (84.91%), Postives = 49/53 (92.45%), Query Frame = 2 Query: 2 VSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAKT 160 VSTDF+GDSRSSIFDAKAGIAL+ FVKLVSWYDNEWGYS+RV+DLIVHM T Sbjct: 287 VSTDFIGDSRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSSRVIDLIVHMDST 339
BLAST of CF504079 vs. ExPASy Swiss-Prot
Match: G3PC_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 1 OS=Zea mays GN=GAPC1 PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 2.332e-20 Identity = 47/54 (87.04%), Postives = 49/54 (90.74%), Query Frame = 2 Query: 2 VSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAKTQ 163 VSTDF+GDSRSSIFDAKAGIAL+ FVKLVSWYDNEWGYS RVVDLI HM KTQ Sbjct: 284 VSTDFLGDSRSSIFDAKAGIALNDHFVKLVSWYDNEWGYSNRVVDLIRHMFKTQ 337
BLAST of CF504079 vs. ExPASy Swiss-Prot
Match: G3PC_MESCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Mesembryanthemum crystallinum GN=GAPC PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.045e-20 Identity = 44/54 (81.48%), Postives = 51/54 (94.44%), Query Frame = 2 Query: 2 VSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAKTQ 163 VSTDF+GD+RSSIFDAKAGI+L+ FVKLVSWYDNEWGYSTRVVDLI+H++K Q Sbjct: 284 VSTDFIGDNRSSIFDAKAGISLNDNFVKLVSWYDNEWGYSTRVVDLIMHISKCQ 337
BLAST of CF504079 vs. ExPASy Swiss-Prot
Match: G3PC_DIACA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Dianthus caryophyllus GN=GAPC PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.045e-20 Identity = 45/53 (84.91%), Postives = 49/53 (92.45%), Query Frame = 2 Query: 2 VSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAKT 160 VSTDFVGD+RSSIFDAKAGIAL+ F+KLVSWYDNEWGYSTRVVDLI H+ KT Sbjct: 284 VSTDFVGDNRSSIFDAKAGIALNDNFIKLVSWYDNEWGYSTRVVDLIAHIHKT 336
BLAST of CF504079 vs. ExPASy Swiss-Prot
Match: G3PD_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 2 OS=Zea mays GN=GAPC2 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 3.977e-20 Identity = 46/54 (85.19%), Postives = 48/54 (88.89%), Query Frame = 2 Query: 2 VSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAKTQ 163 VSTDF GDSRSSIFDAKAGIAL+ F+KLVSWYDNEWGYS RVVDLI HM KTQ Sbjct: 284 VSTDFTGDSRSSIFDAKAGIALNDHFIKLVSWYDNEWGYSNRVVDLIRHMFKTQ 337
BLAST of CF504079 vs. ExPASy Swiss-Prot
Match: G3PC_PHYPA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Physcomitrella patens GN=GAPC PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.194e-20 Identity = 46/52 (88.46%), Postives = 48/52 (92.31%), Query Frame = 2 Query: 2 VSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAK 157 VSTDF+ DSRSSIFDAKAGIALS FVKLV+WYDNEWGYS RVVDLIVHMAK Sbjct: 286 VSTDFITDSRSSIFDAKAGIALSDTFVKLVAWYDNEWGYSNRVVDLIVHMAK 337
BLAST of CF504079 vs. ExPASy Swiss-Prot
Match: G3PC_PEA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Pisum sativum GN=GAPC1 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.784e-20 Identity = 46/52 (88.46%), Postives = 50/52 (96.15%), Query Frame = 2 Query: 2 VSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAK 157 VSTDF+GD+RSSIFDAKAGIAL+ KFVKLVSWYDNE GYSTRVVDLIVH+AK Sbjct: 285 VSTDFIGDTRSSIFDAKAGIALNDKFVKLVSWYDNELGYSTRVVDLIVHIAK 336
BLAST of CF504079 vs. ExPASy Swiss-Prot
Match: G3P_ATRNU (Glyceraldehyde-3-phosphate dehydrogenase OS=Atriplex nummularia PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.860e-20 Identity = 45/53 (84.91%), Postives = 49/53 (92.45%), Query Frame = 2 Query: 2 VSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAKT 160 VSTDFVGD+RSSIFDAKAGI L+ FVKLVSWYDNEWGYS+RVVDLI HM+KT Sbjct: 284 VSTDFVGDNRSSIFDAKAGICLNGNFVKLVSWYDNEWGYSSRVVDLIRHMSKT 336
BLAST of CF504079 vs. ExPASy Swiss-Prot
Match: G3PC_HORVU (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Hordeum vulgare GN=GAPC PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.157e-19 Identity = 46/54 (85.19%), Postives = 48/54 (88.89%), Query Frame = 2 Query: 2 VSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAKTQ 163 VSTDF GDSRSSIFDAKAGIAL+ FVKLVSWYDNEWGYSTRVVDLI HM T+ Sbjct: 252 VSTDFQGDSRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSTRVVDLIRHMHSTK 305 The following BLAST results are available for this feature:
BLAST of CF504079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504079 ID=CF504079; Name=CF504079; organism=Citrus sinensis; type=EST; length=301bpback to top |