CF504087

Overview
NameCF504087
Unique NameCF504087
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length273
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13073 contig Csv1_Contig13073:290..562. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLC6_ARATH (Probable xyloglucan glycosyltransferase 6 OS=Arabidopsis thaliana GN=CSLC6 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.314e-23
Identity = 50/65 (76.92%), Postives = 56/65 (86.15%), Query Frame = 1
Query:   79 FWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAYRK 273
            F+    +  VWRIKALE+ GGWLERTTVEDMDIAVRAHL GWKFI+LNDVK LCE+PESYEAY+K
Sbjct:  384 FFGFNGTAGVWRIKALEDCGGWLERTTVEDMDIAVRAHLCGWKFIYLNDVKCLCELPESYEAYKK 448          

HSP 2 Score: 67.0106 bits (162), Expect = 3.370e-11
Identity = 36/47 (76.60%), Postives = 40/47 (85.11%), Query Frame = 2
Query:    2 LTRPQNINLSFHFEVEQQVNGVFLSFFGFNGTAWPSGELRPLKSLED 142
            LTR QNINLSFHFEVEQQVNGVF++FFGFNGTA   G  R +K+LED
Sbjct:  359 LTRLQNINLSFHFEVEQQVNGVFINFFGFNGTA---GVWR-IKALED 401          
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLC9_ORYSJ (Probable xyloglucan glycosyltransferase 9 OS=Oryza sativa subsp. japonica GN=CSLC9 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 1.717e-23
Identity = 49/65 (75.38%), Postives = 56/65 (86.15%), Query Frame = 1
Query:   79 FWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAYRK 273
            F+    +  VWRIKAL++SGGW+ERTTVEDMDIAVRAHL GWKFIFLNDV+  CE+PESYEAYRK
Sbjct:  301 FFGFNGTAGVWRIKALDDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRK 365          
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLC1_ORYSJ (Probable xyloglucan glycosyltransferase 1 OS=Oryza sativa subsp. japonica GN=CSLC1 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 4.995e-23
Identity = 47/65 (72.31%), Postives = 56/65 (86.15%), Query Frame = 1
Query:   79 FWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAYRK 273
            F+    +  VWRIKALE+SGGW+ERTTVEDMDIAVRAHL GWKF+++NDV+  CE+PESYEAYRK
Sbjct:  396 FFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLKGWKFLYINDVECQCELPESYEAYRK 460          

HSP 2 Score: 65.855 bits (159), Expect = 7.507e-11
Identity = 36/47 (76.60%), Postives = 39/47 (82.98%), Query Frame = 2
Query:    2 LTRPQNINLSFHFEVEQQVNGVFLSFFGFNGTAWPSGELRPLKSLED 142
            LTR QNINL FHFEVEQQVNGVFL+FFGFNGTA   G  R +K+LED
Sbjct:  371 LTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTA---GVWR-IKALED 413          
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLA1_CYATE (Mannan synthase 1 OS=Cyamopsis tetragonoloba GN=ManS PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 3.161e-22
Identity = 34/64 (53.12%), Postives = 51/64 (79.69%), Query Frame = 1
Query:   79 FWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAYR 270
            F+    +  VWRI+A++++GGW +RTTVEDMD+AVRA L+GW+F+F+ DVK   E+P +++AYR
Sbjct:  254 FFGFNGTAGVWRIQAIKDAGGWKDRTTVEDMDLAVRASLHGWEFVFVGDVKVKNELPSTFKAYR 317          

HSP 2 Score: 43.5134 bits (101), Expect = 3.161e-22
Identity = 19/33 (57.58%), Postives = 24/33 (72.73%), Query Frame = 2
Query:    2 LTRPQNINLSFHFEVEQQVNGVFLSFFGFNGTA 100
            +TR Q ++L +HF VEQ+V     SFFGFNGTA
Sbjct:  229 MTRLQEMSLDYHFSVEQEVGSSTYSFFGFNGTA 261          
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLA7_ARATH (Probable mannan synthase 7 OS=Arabidopsis thaliana GN=CSLA7 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.531e-21
Identity = 35/64 (54.69%), Postives = 48/64 (75.00%), Query Frame = 1
Query:   79 FWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAYR 270
            F+    +  VWRI AL ESGGW ++TTVEDMD+AVRA L GWKF++++D+K   E+P S++A R
Sbjct:  282 FFGFNGTAGVWRISALNESGGWNDQTTVEDMDLAVRATLRGWKFLYIDDLKVKSELPCSFKALR 345          

HSP 2 Score: 44.669 bits (104), Expect = 1.531e-21
Identity = 19/33 (57.58%), Postives = 25/33 (75.76%), Query Frame = 2
Query:    2 LTRPQNINLSFHFEVEQQVNGVFLSFFGFNGTA 100
            +TR Q ++LS+HF +EQQV     +FFGFNGTA
Sbjct:  257 MTRLQEMSLSYHFTIEQQVGSSTFAFFGFNGTA 289          
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLA9_ARATH (Glucomannan 4-beta-mannosyltransferase 9 OS=Arabidopsis thaliana GN=CSLA9 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.593e-21
Identity = 34/64 (53.12%), Postives = 47/64 (73.44%), Query Frame = 1
Query:   79 FWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAYR 270
            F+    +  +WRI AL E+GGW +RTTVEDMD+AVRA L GWKF++L  +K   E+P +++AYR
Sbjct:  260 FFGFNGTAGIWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTFKAYR 323          

HSP 2 Score: 42.3578 bits (98), Expect = 2.593e-21
Identity = 18/33 (54.55%), Postives = 24/33 (72.73%), Query Frame = 2
Query:    2 LTRPQNINLSFHFEVEQQVNGVFLSFFGFNGTA 100
            +TR Q ++L +HF VEQ+V     +FFGFNGTA
Sbjct:  235 MTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTA 267          
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLAB_ARATH (Probable mannan synthase 11 OS=Arabidopsis thaliana GN=CSLA11 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 9.686e-21
Identity = 34/64 (53.12%), Postives = 48/64 (75.00%), Query Frame = 1
Query:   79 FWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAYR 270
            F+    +  VWR+ A+EE+GGW +RTTVEDMD+AVR  L+GWKF+F+NDV    E+P  ++A+R
Sbjct:  176 FFGFNGTAGVWRLAAMEEAGGWKDRTTVEDMDLAVRVGLHGWKFVFVNDVSVKSELPSQFKAFR 239          

HSP 2 Score: 38.5058 bits (88), Expect = 9.686e-21
Identity = 16/33 (48.48%), Postives = 23/33 (69.70%), Query Frame = 2
Query:    2 LTRPQNINLSFHFEVEQQVNGVFLSFFGFNGTA 100
            +TR Q ++L++HF  EQ+      +FFGFNGTA
Sbjct:  151 MTRMQEMSLNYHFTAEQESGSTRHAFFGFNGTA 183          
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLA1_ARATH (Probable mannan synthase 1 OS=Arabidopsis thaliana GN=CSLA1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.255e-20
Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = 1
Query:   79 FWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAYR 270
            F+    +  VWRI A+E +GGW  RTTVEDMD+AVR  L+GWKF++LND+    E+P  ++AYR
Sbjct:  287 FFGFNGTAGVWRISAMEAAGGWKSRTTVEDMDLAVRVGLHGWKFVYLNDLTVRNELPSKFKAYR 350          

HSP 2 Score: 40.817 bits (94), Expect = 1.255e-20
Identity = 17/33 (51.52%), Postives = 25/33 (75.76%), Query Frame = 2
Query:    2 LTRPQNINLSFHFEVEQQVNGVFLSFFGFNGTA 100
            +TR Q ++L++HF+VEQ+      +FFGFNGTA
Sbjct:  262 MTRMQEMSLNYHFKVEQESGSTRHAFFGFNGTA 294          
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLA7_ORYSJ (Probable mannan synthase 7 OS=Oryza sativa subsp. japonica GN=CSLA7 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.759e-20
Identity = 34/63 (53.97%), Postives = 46/63 (73.02%), Query Frame = 1
Query:   79 FWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAY 267
            F+    +  VWR  A+ E+GGW +RTTVEDMD+AVRA LNGWKFI++ D++   E+P +Y AY
Sbjct:  312 FFSFNGTAGVWRTTAINEAGGWKDRTTVEDMDLAVRASLNGWKFIYVGDIRVKSELPSTYGAY 374          

HSP 2 Score: 38.1206 bits (87), Expect = 2.759e-20
Identity = 16/33 (48.48%), Postives = 21/33 (63.64%), Query Frame = 2
Query:    2 LTRPQNINLSFHFEVEQQVNGVFLSFFGFNGTA 100
            LTR Q +   +HF+VEQ+      +FF FNGTA
Sbjct:  287 LTRVQKMFFDYHFKVEQEAGSATFAFFSFNGTA 319          
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLAF_ARATH (Probable mannan synthase 15 OS=Arabidopsis thaliana GN=CSLA15 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 3.594e-20
Identity = 34/64 (53.12%), Postives = 48/64 (75.00%), Query Frame = 1
Query:   79 FWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAYR 270
            F+    +  VWR+ A+EE+GGW +RTTVEDMD+AVR  L GWKFIF+ND++   E+P  ++A+R
Sbjct:  274 FFGFNGTAGVWRMVAMEEAGGWKDRTTVEDMDLAVRVGLLGWKFIFVNDLEVKSELPSQFKAFR 337          

HSP 2 Score: 39.2762 bits (90), Expect = 3.594e-20
Identity = 17/33 (51.52%), Postives = 23/33 (69.70%), Query Frame = 2
Query:    2 LTRPQNINLSFHFEVEQQVNGVFLSFFGFNGTA 100
            +TR Q ++L++HF  EQQ      +FFGFNGTA
Sbjct:  249 MTRMQEMSLNYHFMAEQQSGSTRHAFFGFNGTA 281          
The following BLAST results are available for this feature:
BLAST of CF504087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
CSLC6_ARATH1.314e-2376.92Probable xyloglucan glycosyltransferase 6 OS=Arabi... [more]
CSLC9_ORYSJ1.717e-2375.38Probable xyloglucan glycosyltransferase 9 OS=Oryza... [more]
CSLC1_ORYSJ4.995e-2372.31Probable xyloglucan glycosyltransferase 1 OS=Oryza... [more]
CSLA1_CYATE3.161e-2253.13Mannan synthase 1 OS=Cyamopsis tetragonoloba GN=Ma... [more]
CSLA7_ARATH1.531e-2154.69Probable mannan synthase 7 OS=Arabidopsis thaliana... [more]
CSLA9_ARATH2.593e-2153.13Glucomannan 4-beta-mannosyltransferase 9 OS=Arabid... [more]
CSLAB_ARATH9.686e-2153.13Probable mannan synthase 11 OS=Arabidopsis thalian... [more]
CSLA1_ARATH1.255e-2053.13Probable mannan synthase 1 OS=Arabidopsis thaliana... [more]
CSLA7_ORYSJ2.759e-2053.97Probable mannan synthase 7 OS=Oryza sativa subsp. ... [more]
CSLAF_ARATH3.594e-2053.13Probable mannan synthase 15 OS=Arabidopsis thalian... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-575 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-13_F01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504087 ID=CF504087; Name=CF504087; organism=Citrus sinensis; type=EST; length=273bp
GCTGACACGCCCCCAGAACATTAATTTGTCTTTTCATTTCGAGGTGGAAC
AACAGGTTAACGGAGTATTTCTAAGCTTTTTTGGTTTCAACGGAACAGCC
TGGCCGTCTGGAGAATTAAGGCCCTTGAAGAGTCTGGAGGATGGCTTGAA
AGAACAACCGTAGAGGACATGGACATAGCTGTTCGTGCTCATCTCAATGG
TTGGAAATTCATATTCCTTAATGATGTCAAGGGCCTTTGTGAAGTTCCTG
AGTCTTATGAAGCTTATAGAAAG
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