CF504087
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLAA_ARATH (Probable mannan synthase 10 OS=Arabidopsis thaliana GN=CSLA10 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.028e-19 Identity = 35/64 (54.69%), Postives = 48/64 (75.00%), Query Frame = 1 Query: 79 FWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAYR 270 F+ + VWR+ A+EE+GGW +RTTVEDMD+AVRA L GWKF+FLND+ E+P ++A+R Sbjct: 285 FFSFNGTAGVWRMAAMEEAGGWHDRTTVEDMDLAVRAGLLGWKFVFLNDLTVKSELPSKFKAFR 348 HSP 2 Score: 35.8094 bits (81), Expect = 1.028e-19 Identity = 15/33 (45.45%), Postives = 22/33 (66.67%), Query Frame = 2 Query: 2 LTRPQNINLSFHFEVEQQVNGVFLSFFGFNGTA 100 +TR Q ++L++HF EQ+ +FF FNGTA Sbjct: 260 MTRMQEMSLNYHFMAEQESGSTRHAFFSFNGTA 292
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLA5_ORYSJ (Probable mannan synthase 5 OS=Oryza sativa subsp. japonica GN=CSLA5 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.737e-19 Identity = 33/63 (52.38%), Postives = 47/63 (74.60%), Query Frame = 1 Query: 79 FWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAY 267 F+ + VWR +A+ ++GGW +RTTVEDMD+AVRA L GWKFI+L D++ E+P +Y+AY Sbjct: 297 FFSFNGTAGVWRTEAINDAGGWKDRTTVEDMDLAVRATLKGWKFIYLGDLRVKSELPSTYKAY 359 HSP 2 Score: 36.965 bits (84), Expect = 1.737e-19 Identity = 16/33 (48.48%), Postives = 20/33 (60.61%), Query Frame = 2 Query: 2 LTRPQNINLSFHFEVEQQVNGVFLSFFGFNGTA 100 LTR Q L +HF+ EQ+ +FF FNGTA Sbjct: 272 LTRIQKTFLDYHFKAEQEAGSATFAFFSFNGTA 304
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLA6_ORYSJ (Probable mannan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLA6 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.847e-18 Identity = 29/64 (45.31%), Postives = 45/64 (70.31%), Query Frame = 1 Query: 79 FWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAYR 270 F+ + VWR + ++ESGGW +RTT EDMD+A+RA L GW+F+++ +K E+P + +AYR Sbjct: 304 FFGYNGTAGVWRRQVIDESGGWEDRTTAEDMDLALRAGLLGWEFVYVGSIKVKSELPSTLKAYR 367 HSP 2 Score: 41.2022 bits (95), Expect = 1.847e-18 Identity = 16/33 (48.48%), Postives = 24/33 (72.73%), Query Frame = 2 Query: 2 LTRPQNINLSFHFEVEQQVNGVFLSFFGFNGTA 100 LTR Q +++ +HF+VEQ+ +FFG+NGTA Sbjct: 279 LTRMQEMSMDYHFKVEQEAGSSLCNFFGYNGTA 311
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLA3_ORYSJ (Probable mannan synthase 3 OS=Oryza sativa subsp. japonica GN=CSLA3 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.009e-15 Identity = 41/80 (51.25%), Postives = 52/80 (65.00%), Query Frame = 1 Query: 31 FSFRGGTTG*RSISKLFWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAYR 270 + F+ G S F F + VWRI ALEE+GGW +RTTVEDMD+AVRA L GWKF++L DVK E+P + + YR Sbjct: 263 YHFKVEQEGGSSTFAFFGFN-GTAGVWRISALEEAGGWKDRTTVEDMDLAVRAGLKGWKFVYLADVKVKSELPSNLKTYR 341
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLAB_ORYSJ (Probable mannan synthase 11 OS=Oryza sativa subsp. japonica GN=CSLA11 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.317e-15 Identity = 36/69 (52.17%), Postives = 51/69 (73.91%), Query Frame = 1 Query: 64 SISKLFWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAYR 270 S+ F F + VWRI A++++GGW +RTTVEDMD+AVRA L GWKF+++ DVK E+P +++AYR Sbjct: 277 SVYSFFGFN-GTAGVWRIAAIDDAGGWKDRTTVEDMDLAVRATLQGWKFVYVGDVKVKSELPSTFKAYR 344
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLA3_ARATH (Probable mannan synthase 3 OS=Arabidopsis thaliana GN=CSLA3 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.721e-15 Identity = 38/69 (55.07%), Postives = 52/69 (75.36%), Query Frame = 1 Query: 64 SISKLFWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAYR 270 SI F F + VWRI AL E+GGW +RTTVEDMD+AVRA L+GWKF++++DV+ E+P +++AYR Sbjct: 279 SIHAFFGFN-GTAGVWRIAALNEAGGWKDRTTVEDMDLAVRACLHGWKFVYVHDVEVKNELPSTFKAYR 346
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLA1_ORYSJ (Glucomannan 4-beta-mannosyltransferase 1 OS=Oryza sativa subsp. japonica GN=CSLA1 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.006e-15 Identity = 34/69 (49.28%), Postives = 50/69 (72.46%), Query Frame = 1 Query: 64 SISKLFWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAYR 270 S+ F F + VWR+ A+ E+GGW +RTTVEDMD+A+RA L GWKF++L DV+ E+P +++A+R Sbjct: 243 SVCAFFGFN-GTAGVWRVSAVNEAGGWKDRTTVEDMDLAIRASLKGWKFVYLGDVQVKSELPSTFKAFR 310
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLA2_ORYSJ (Probable mannan synthase 2 OS=Oryza sativa subsp. japonica GN=CSLA2 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 8.540e-15 Identity = 32/69 (46.38%), Postives = 49/69 (71.01%), Query Frame = 1 Query: 64 SISKLFWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAYR 270 S F+ + VWR+ A+ +SGGW +RTTVEDMD+AVRA L GW+F+++ D++ E+P +++AYR Sbjct: 301 SFMHAFFGFNGTAGVWRVSAINQSGGWKDRTTVEDMDLAVRASLKGWEFLYVGDIRVKSELPSTFQAYR 369
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLA4_ORYSJ (Probable mannan synthase 4 OS=Oryza sativa subsp. japonica GN=CSLA4 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.115e-14 Identity = 33/69 (47.83%), Postives = 50/69 (72.46%), Query Frame = 1 Query: 64 SISKLFWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAYR 270 S+ F F + VWR+ A+ E+GGW +RTTVEDMD+AVRA L GW+F+++ D++ E+P +++AYR Sbjct: 271 SMHSFFGFN-GTAGVWRVSAINEAGGWKDRTTVEDMDLAVRASLKGWQFLYVGDIRVKSELPSTFKAYR 338
BLAST of CF504087 vs. ExPASy Swiss-Prot
Match: CSLA9_ORYSJ (Probable mannan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLA9 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.457e-14 Identity = 34/69 (49.28%), Postives = 49/69 (71.01%), Query Frame = 1 Query: 64 SISKLFWFQRNSLAVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKGLCEVPESYEAYR 270 S + F+ + VWRI A+ E+GGW +RTTVEDMD+AVRA L GWKF++L D+ E+P +++A+R Sbjct: 250 SSTHAFFGFNGTAGVWRISAMNEAGGWKDRTTVEDMDLAVRAGLKGWKFVYLGDLMVKSELPSTFKAFR 318 The following BLAST results are available for this feature:
BLAST of CF504087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504087 ID=CF504087; Name=CF504087; organism=Citrus sinensis; type=EST; length=273bpback to top |