CF504094
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504094 vs. ExPASy Swiss-Prot
Match: RL26_AILME (60S ribosomal protein L26 OS=Ailuropoda melanoleuca GN=RPL26 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.447e-30 Identity = 65/87 (74.71%), Postives = 79/87 (90.80%), Query Frame = 1 Query: 1 APSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVIT 258 APS +RR +S+PLS +LRQKYNVRSMP+RKDDEVQVVRG YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+PSKVVIT Sbjct: 21 APSHIRRKTLSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVIT 107
BLAST of CF504094 vs. ExPASy Swiss-Prot
Match: RL26_LITLI (60S ribosomal protein L26 OS=Littorina littorea GN=RPL26 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 4.654e-29 Identity = 62/86 (72.09%), Postives = 77/86 (89.53%), Query Frame = 1 Query: 1 APSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVI 255 APS +RR +MS+P+S +LRQKYN RSMP+RKDDEVQVVRG +KG++ GKVVQVYR+K+V+HIERI REK NG+TV VGI+PSKV+I Sbjct: 21 APSHMRRKIMSSPMSKELRQKYNCRSMPIRKDDEVQVVRGHFKGQQVGKVVQVYRKKFVVHIERIQREKANGATVYVGIHPSKVLI 106
BLAST of CF504094 vs. ExPASy Swiss-Prot
Match: RL26_SCHPO (60S ribosomal protein L26 OS=Schizosaccharomyces pombe GN=rpl26 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 2.554e-27 Identity = 55/86 (63.95%), Postives = 75/86 (87.21%), Query Frame = 1 Query: 1 APSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVIT 258 APSSVRR+LMSAPLS +LR++Y +RS+PVR+DD++ V+RG+ KGREGK+ VYR+K+++ IER+TREK NG++ VGI+ SKVVIT Sbjct: 21 APSSVRRVLMSAPLSKELREQYKIRSLPVRRDDQITVIRGSNKGREGKITSVYRKKFLLLIERVTREKANGASAPVGIDASKVVIT 106
BLAST of CF504094 vs. ExPASy Swiss-Prot
Match: RL26_CAEEL (60S ribosomal protein L26 OS=Caenorhabditis elegans GN=rpl-26 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.077e-25 Identity = 52/86 (60.47%), Postives = 72/86 (83.72%), Query Frame = 1 Query: 1 APSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVIT 258 APS RR +MSAPL+ +LR K+ +R++P+R DDEV V+RG +KG G+V++ YR+K+VIHI++ITREK NGSTV++GI+PSKV IT Sbjct: 21 APSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRGRHKGNTGRVLRCYRKKFVIHIDKITREKANGSTVHIGIHPSKVAIT 106
BLAST of CF504094 vs. ExPASy Swiss-Prot
Match: RL26B_YEAST (60S ribosomal protein L26-B OS=Saccharomyces cerevisiae GN=RPL26B PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 4.508e-24 Identity = 47/86 (54.65%), Postives = 73/86 (84.88%), Query Frame = 1 Query: 1 APSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVIT 258 APSS RR+L+SAPLS +LR +Y ++++P+R+DDEV VVRG+ KG+EGK+ VYR K+ + ++++T+EKVNG++V + ++PSK+VIT Sbjct: 22 APSSERRVLLSAPLSKELRAQYGIKALPIRRDDEVLVVRGSKKGQEGKISSVYRLKFAVQVDKVTKEKVNGASVPINLHPSKLVIT 107
BLAST of CF504094 vs. ExPASy Swiss-Prot
Match: RL26A_YEAST (60S ribosomal protein L26-A OS=Saccharomyces cerevisiae GN=RPL26A PE=1 SV=3) HSP 1 Score: 109.768 bits (273), Expect = 4.508e-24 Identity = 47/86 (54.65%), Postives = 73/86 (84.88%), Query Frame = 1 Query: 1 APSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVIT 258 APSS RR+L+SAPLS +LR +Y ++++P+R+DDEV VVRG+ KG+EGK+ VYR K+ + ++++T+EKVNG++V + ++PSK+VIT Sbjct: 22 APSSQRRVLLSAPLSKELRAQYGIKALPIRRDDEVLVVRGSKKGQEGKISSVYRLKFAVQVDKVTKEKVNGASVPINLHPSKLVIT 107
BLAST of CF504094 vs. ExPASy Swiss-Prot
Match: RL26_DICDI (60S ribosomal protein L26 OS=Dictyostelium discoideum GN=rpl26 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.713e-23 Identity = 52/86 (60.47%), Postives = 66/86 (76.74%), Query Frame = 1 Query: 1 APSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVIT 258 A S RRI MSA LS DLR KYNVRS+P+RKDDEV+VV G K EGKVV YR+K+VIHI+++T K NG+T +G++PS V++T Sbjct: 21 ASSGERRIRMSAALSHDLRTKYNVRSLPIRKDDEVRVVCGDNKNHEGKVVACYRKKYVIHIDKLTVTKTNGNTAQIGVSPSNVILT 106
BLAST of CF504094 vs. ExPASy Swiss-Prot
Match: RL24_PYRHO (50S ribosomal protein L24P OS=Pyrococcus horikoshii GN=rpl24p PE=3 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 3.696e-18 Identity = 44/85 (51.76%), Postives = 65/85 (76.47%), Query Frame = 1 Query: 1 APSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVI 255 AP VR+ +MSAPLS +LR+KY VR++PVR D+V+++RG +KG EGKVV+V +++ I++E +T KVNG+ V I+PS V+I Sbjct: 18 APLHVRQKMMSAPLSKELREKYKVRNLPVRVGDKVRIMRGDFKGYEGKVVEVDLKRYRIYVEGVTLRKVNGTEVFYPIHPSNVMI 102
BLAST of CF504094 vs. ExPASy Swiss-Prot
Match: RL24_PYRFU (50S ribosomal protein L24P OS=Pyrococcus furiosus GN=rpl24p PE=3 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 3.696e-18 Identity = 45/85 (52.94%), Postives = 63/85 (74.12%), Query Frame = 1 Query: 1 APSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVI 255 AP VR+ LMSAPLS +LR+KY VR++PVR D+V+++RG YKG EGKVV+V +++ I++E T K NG+ V I+PS V+I Sbjct: 18 APLHVRQKLMSAPLSRELREKYKVRNLPVRVGDKVRIMRGDYKGHEGKVVEVDLKRYRIYVEGATLRKTNGTEVFYPIHPSNVMI 102
BLAST of CF504094 vs. ExPASy Swiss-Prot
Match: RL24_PYRKO (50S ribosomal protein L24P OS=Pyrococcus kodakaraensis GN=rpl24p PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.835e-17 Identity = 42/85 (49.41%), Postives = 64/85 (75.29%), Query Frame = 1 Query: 1 APSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVI 255 AP +R +MSAPLS +LR+KY VR++P+R D+V+V+RG +KG EGKVV+V R++ IH+E +T +K +G+ V ++PS V+I Sbjct: 18 APLHLRGKIMSAPLSKELREKYGVRNLPIRVGDKVKVMRGDFKGVEGKVVEVDLRRYRIHVEGVTHKKTDGTEVFYPLHPSNVMI 102 The following BLAST results are available for this feature:
BLAST of CF504094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504094 ID=CF504094; Name=CF504094; organism=Citrus sinensis; type=EST; length=365bpback to top |