CF504094
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504094 vs. ExPASy Swiss-Prot
Match: RL24_PYRIL (50S ribosomal protein L24P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rpl24p PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.107e-13 Identity = 39/85 (45.88%), Postives = 55/85 (64.71%), Query Frame = 1 Query: 1 APSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVI 255 AP +R L +A LS DL++K V+ +PVR+ D V ++RG +KG GKVV+V +K I++E TR G TV I+PSKV+I Sbjct: 19 APLHLRHKLFNAKLSPDLQKKLGVKRLPVRRGDTVMIMRGDFKGVTGKVVKVDLKKVRIYVEGATRTNSKGQTVYYPIHPSKVMI 103
BLAST of CF504094 vs. ExPASy Swiss-Prot
Match: RL24_METS3 (50S ribosomal protein L24P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl24p PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.361e-12 Identity = 39/85 (45.88%), Postives = 54/85 (63.53%), Query Frame = 1 Query: 1 APSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVI 255 AP+ R MSA LS DLR RS+P+RK D+VQV+RG +KG EG V+ V + I IE +T K +G+ V + ++PS V+I Sbjct: 15 APAHARGKHMSATLSKDLRADIGKRSLPIRKGDKVQVLRGDFKGHEGAVLGVDYGSYKITIEEVTLSKPDGTAVFLPVDPSNVMI 99
BLAST of CF504094 vs. ExPASy Swiss-Prot
Match: RL24_PYRCJ (50S ribosomal protein L24P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl24p PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.321e-12 Identity = 38/85 (44.71%), Postives = 56/85 (65.88%), Query Frame = 1 Query: 1 APSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVI 255 AP +RR L++A LS +L++K V+ +PVR+ D V ++RG +KG GKVV+V ++ I +E TR G TV I+PSKV+I Sbjct: 19 APLHLRRKLLNAKLSPELQKKLGVKRLPVRRGDTVLIMRGDFKGVTGKVVKVDLKRVRIFVEGATRTNSRGQTVYYPIHPSKVMI 103
BLAST of CF504094 vs. ExPASy Swiss-Prot
Match: RL24_PYRAR (50S ribosomal protein L24P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rpl24p PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.321e-12 Identity = 38/85 (44.71%), Postives = 54/85 (63.53%), Query Frame = 1 Query: 1 APSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVI 255 AP +R L +A LS +L +K V+ +PVR+ D V ++RG +KG GKVV+V +K I++E TR G TV I+PSKV+I Sbjct: 19 APLHLRHKLFNAKLSPELEKKLGVKRLPVRRGDTVMILRGDFKGVTGKVVRVDLKKVRIYVEGATRTNSRGQTVYYPIHPSKVMI 103
BLAST of CF504094 vs. ExPASy Swiss-Prot
Match: RL24_PYRAE (50S ribosomal protein L24P OS=Pyrobaculum aerophilum GN=rpl24p PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.031e-12 Identity = 38/85 (44.71%), Postives = 55/85 (64.71%), Query Frame = 1 Query: 1 APSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVI 255 AP +RR L +A LS +L +K V+ +PVR+ D V ++RG +KG GKVV+V ++ I++E TR G TV I+PSKV+I Sbjct: 19 APLHLRRKLFNAKLSPELAKKLGVKRLPVRRGDTVLILRGDFKGVTGKVVKVDLKRVRIYVEGATRTNSRGQTVYYPIHPSKVMI 103
BLAST of CF504094 vs. ExPASy Swiss-Prot
Match: RL24_META3 (50S ribosomal protein L24P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl24p PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.031e-12 Identity = 36/85 (42.35%), Postives = 55/85 (64.71%), Query Frame = 1 Query: 1 APSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVI 255 AP R LMSA LS DL++KYN ++PV+ D V+++RGT+KG EG+V +V + + I++E K +G+ I+PS V+I Sbjct: 19 APLHARNKLMSAMLSKDLKEKYNKNALPVKTGDTVKILRGTFKGIEGEVSKVDYKSYKIYVEGAVNRKQDGNESLYPIHPSNVMI 103
BLAST of CF504094 vs. ExPASy Swiss-Prot
Match: RL24_SULSO (50S ribosomal protein L24P OS=Sulfolobus solfataricus GN=rpl24p PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.958e-12 Identity = 38/85 (44.71%), Postives = 57/85 (67.06%), Query Frame = 1 Query: 4 PSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVIT 258 P R+ L+ A +S D+ +Y ++ + VRK D V+V+RG G+EGKVV+V + + IE ITR+KV+G+ V V I+ SKV+IT Sbjct: 17 PLHQRKKLLVAKVSDDIASQYGIKRIRVRKGDTVRVMRGGNSGKEGKVVEVNTKTGRLAIEGITRKKVDGTPVYVWIHASKVMIT 101
BLAST of CF504094 vs. ExPASy Swiss-Prot
Match: RL24_CALMQ (50S ribosomal protein L24P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl24p PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.170e-12 Identity = 36/85 (42.35%), Postives = 56/85 (65.88%), Query Frame = 1 Query: 1 APSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVI 255 AP RR L++APLS DL+++ +R +PVR D V ++RG +KG GKV +V ++ I+++ + +K +G V I+PSKVVI Sbjct: 20 APWHARRRLLTAPLSKDLQRQLGIRRIPVRVGDTVLILRGDFKGTRGKVTRVDYKRVRIYVDSASFKKPSGEAVYYPIHPSKVVI 104
BLAST of CF504094 vs. ExPASy Swiss-Prot
Match: RL24_ARCFU (50S ribosomal protein L24P OS=Archaeoglobus fulgidus GN=rpl24p PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.170e-12 Identity = 35/81 (43.21%), Postives = 56/81 (69.14%), Query Frame = 1 Query: 16 RRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVIT 258 R L+ A LS DLR+KY R++ VRK D+V+++RG + G EG+V++V ++ I ++ +T K +G+ V V I+PS V+IT Sbjct: 25 RHKLLHATLSKDLRKKYGKRAIRVRKGDKVRIMRGQFAGHEGRVLEVDMKRCRITVDGVTVTKADGTEVAVPIHPSNVMIT 105
BLAST of CF504094 vs. ExPASy Swiss-Prot
Match: RL24_METM7 (50S ribosomal protein L24P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl24p PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.819e-12 Identity = 35/86 (40.70%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 1 APSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVIT 258 AP +R +M+A LS +L++K+N S+PV+K D V+V+RG +KG EG+V +V + I +E + +K +G+ I+PS V+IT Sbjct: 19 APLHLRNSVMAAMLSKELKEKFNKNSLPVKKGDTVKVLRGNFKGIEGEVSKVDYAGYKIIVEGVVNKKQDGTETAYPIHPSNVMIT 104 The following BLAST results are available for this feature:
BLAST of CF504094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504094 ID=CF504094; Name=CF504094; organism=Citrus sinensis; type=EST; length=365bpback to top |