CF504094
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504094 vs. ExPASy Swiss-Prot
Match: RL24_METM5 (50S ribosomal protein L24P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl24p PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.819e-12 Identity = 35/86 (40.70%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 1 APSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVIT 258 AP +R +M+A LS +L++K+N S+PV+K D V+V+RG +KG EG+V +V + I +E + +K +G+ I+PS V+IT Sbjct: 19 APLHLRNSVMAAMLSKELKEKFNKNSLPVKKGDTVKVLRGNFKGIEGEVSKVDYAGYKIIVEGVVNKKQDGTETAYPIHPSNVMIT 104
BLAST of CF504094 vs. ExPASy Swiss-Prot
Match: RL24_METJA (50S ribosomal protein L24P OS=Methanocaldococcus jannaschii GN=rpl24p PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.819e-12 Identity = 34/85 (40.00%), Postives = 58/85 (68.24%), Query Frame = 1 Query: 1 APSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVI 255 AP +RR +MSA LS +L++K ++PVRK D V+++RG +KG EG+V++V +++ I++E ++ +G V I+PS V+I Sbjct: 19 APLHLRRKVMSAMLSKELKEKLGKNAIPVRKGDVVRIMRGDFKGLEGEVIKVDLKRYRIYVEGANNKRQDGREVPYPIHPSNVMI 103
BLAST of CF504094 vs. ExPASy Swiss-Prot
Match: RL24_METST (50S ribosomal protein L24P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl24p PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.504e-11 Identity = 35/86 (40.70%), Postives = 55/86 (63.95%), Query Frame = 1 Query: 1 APSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVIT 258 AP R MS LS DL++++N RS PVRK D V++VRG ++G EGKV V + + + ++ + +K +GS + I+PS +V+T Sbjct: 15 APLHKRHNSMSVHLSDDLKEEFNRRSFPVRKGDSVEIVRGDFRGTEGKVEGVDLKNYRVLVDGASSQKQDGSKLYQPIHPSNLVLT 100
BLAST of CF504094 vs. ExPASy Swiss-Prot
Match: RL24_METMP (50S ribosomal protein L24P OS=Methanococcus maripaludis GN=rpl24p PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.566e-11 Identity = 35/86 (40.70%), Postives = 56/86 (65.12%), Query Frame = 1 Query: 1 APSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVIT 258 AP +R +MSA L+ +L++KY S+PV+K D V+V+RG +KG EG+V +V + I +E + +K +G+ I+PS V+IT Sbjct: 19 APLHLRNSVMSAMLAKELKEKYAKNSLPVKKGDTVKVLRGNFKGIEGEVSKVDYAGYKIIVEGVVNKKQDGNETAYPIHPSNVMIT 104
BLAST of CF504094 vs. ExPASy Swiss-Prot
Match: RL24_METVS (50S ribosomal protein L24P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl24p PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.351e-11 Identity = 35/86 (40.70%), Postives = 55/86 (63.95%), Query Frame = 1 Query: 1 APSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVIT 258 AP +R +MSA LS L++KY ++PV+K D V+V+RG++KG EG+V +V + I +E + +K +G I+PS V+IT Sbjct: 19 APLHLRNSVMSAMLSKALKEKYGKNALPVKKGDTVKVLRGSFKGIEGEVSKVNYSGYKIIVEGVVNKKQDGKETPYPIHPSNVMIT 104
BLAST of CF504094 vs. ExPASy Swiss-Prot
Match: RL24_METVA (50S ribosomal protein L24P OS=Methanococcus vannielii GN=rpl24p PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.351e-11 Identity = 35/86 (40.70%), Postives = 55/86 (63.95%), Query Frame = 1 Query: 1 APSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVIT 258 AP +R +MSA LS L++KY ++PV+K D V+V+RG++KG EG+V +V + I +E + +K +G I+PS V+IT Sbjct: 19 APLHLRNSVMSAMLSKALKEKYGKNALPVKKGDTVKVLRGSFKGIEGEVSKVNYSGYKIIVEGVVNKKQDGKETPYPIHPSNVMIT 104
BLAST of CF504094 vs. ExPASy Swiss-Prot
Match: RL24_METS5 (50S ribosomal protein L24P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl24p PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.351e-11 Identity = 35/75 (46.67%), Postives = 51/75 (68.00%), Query Frame = 1 Query: 34 APLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVIT 258 APLS +L ++Y ++ + +RKDD V+V+RG G EGKV QV+ I IE +TR+K +G+ V + I+ SKV IT Sbjct: 8 APLSDELAKEYGMKRIGIRKDDTVRVMRGDNYGFEGKVTQVFPESGRIAIEGLTRKKADGTPVYIKIHASKVEIT 82
BLAST of CF504094 vs. ExPASy Swiss-Prot
Match: RL24_THEVO (50S ribosomal protein L24P OS=Thermoplasma volcanium GN=rpl24p PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.465e-11 Identity = 33/77 (42.86%), Postives = 47/77 (61.04%), Query Frame = 1 Query: 28 MSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVIT 258 ++ LS DLR+KY +RS P+ K D V+VV G KG GKV +V ++ +E IT K++G GI+P K+ IT Sbjct: 5 LNVALSKDLRKKYGIRSFPIVKGDVVKVVSGARKGEGGKVAEVDHHSGLVIVEGITIAKIDGKQKGFGISPEKLQIT 81 The following BLAST results are available for this feature:
BLAST of CF504094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504094 ID=CF504094; Name=CF504094; organism=Citrus sinensis; type=EST; length=365bpback to top |