CF504098

Overview
NameCF504098
Unique NameCF504098
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length317
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504098 vs. ExPASy Swiss-Prot
Match: INO1_ORYSJ (Inositol-3-phosphate synthase OS=Oryza sativa subsp. japonica GN=INO1 PE=2 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 3.871e-52
Identity = 100/105 (95.24%), Postives = 101/105 (96.19%), Query Frame = 2
Query:    2 FVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPY 316
            FVPGLIDLAI+ NCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSN ILY  GEHPDHVVVIKYVPY
Sbjct:  287 FVPGLIDLAIKNNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNAILYELGEHPDHVVVIKYVPY 391          
BLAST of CF504098 vs. ExPASy Swiss-Prot
Match: INO1_ARATH (Inositol-3-phosphate synthase isozyme 1 OS=Arabidopsis thaliana GN=At4g39800 PE=2 SV=3)

HSP 1 Score: 202.986 bits (515), Expect = 3.871e-52
Identity = 99/105 (94.29%), Postives = 102/105 (97.14%), Query Frame = 2
Query:    2 FVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPY 316
            FVPGLID+AIR N LIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMV+SNGIL+ PGEHPDHVVVIKYVPY
Sbjct:  288 FVPGLIDMAIRNNVLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVASNGILFEPGEHPDHVVVIKYVPY 392          
BLAST of CF504098 vs. ExPASy Swiss-Prot
Match: INO1_BRANA (Inositol-3-phosphate synthase OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 5.055e-52
Identity = 99/105 (94.29%), Postives = 102/105 (97.14%), Query Frame = 2
Query:    2 FVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPY 316
            FVPGLIDLAI+ N LIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMV+SNGIL+ PGEHPDHVVVIKYVPY
Sbjct:  287 FVPGLIDLAIKNNVLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVASNGILFEPGEHPDHVVVIKYVPY 391          
BLAST of CF504098 vs. ExPASy Swiss-Prot
Match: INO1_PHAVU (Inositol-3-phosphate synthase OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 2.509e-51
Identity = 98/105 (93.33%), Postives = 101/105 (96.19%), Query Frame = 2
Query:    2 FVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPY 316
            FVPGLID+AIR N LIGGDDFKSGQTKMKSVL DFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMV+SNGIL+ PGEHPDHVVVIKYVPY
Sbjct:  288 FVPGLIDMAIRNNVLIGGDDFKSGQTKMKSVLGDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVASNGILFEPGEHPDHVVVIKYVPY 392          
BLAST of CF504098 vs. ExPASy Swiss-Prot
Match: INO1_DROME (Inositol-3-phosphate synthase OS=Drosophila melanogaster GN=Inos PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 7.070e-46
Identity = 89/105 (84.76%), Postives = 93/105 (88.57%), Query Frame = 2
Query:    2 FVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPY 316
            FVPGLI LA  +N  I GDDFKSGQTK+KSVLVDFLVGAGIKP SI SYNHLGNNDG NLSAPQ FRSKEISKSNVVDDMV+SN +LYGP EHPDHVVVIKYVPY
Sbjct:  288 FVPGLIQLAEEKNVFIAGDDFKSGQTKIKSVLVDFLVGAGIKPVSIASYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDMVASNRLLYGPDEHPDHVVVIKYVPY 392          
BLAST of CF504098 vs. ExPASy Swiss-Prot
Match: INO1B_XENLA (Inositol-3-phosphate synthase 1-B OS=Xenopus laevis GN=isyna1-B PE=2 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 3.509e-45
Identity = 88/105 (83.81%), Postives = 92/105 (87.62%), Query Frame = 2
Query:    2 FVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPY 316
            FVPG I+LAIR N  IGGDDFKSGQTK+KSVL+DFLV AG+KP SIVSYNHLGNNDG NLSAPQ FRSKEISKSNVVDDMV SN ILYGP E PDH VVIKYVPY
Sbjct:  281 FVPGAIELAIRHNVFIGGDDFKSGQTKIKSVLMDFLVSAGLKPVSIVSYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDMVQSNPILYGPNEKPDHCVVIKYVPY 385          
BLAST of CF504098 vs. ExPASy Swiss-Prot
Match: INO1A_XENLA (Inositol-3-phosphate synthase 1-A OS=Xenopus laevis GN=isyna1-A PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 1.333e-44
Identity = 86/105 (81.90%), Postives = 92/105 (87.62%), Query Frame = 2
Query:    2 FVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPY 316
            FVPG I+LA++ N  IGGDDFKSGQTK+KSVL+DFLV AG+KP SIVSYNHLGNNDG NLSAPQ FRSKEISKSNVVDDMV SN ILYGP E PDH VVIKYVPY
Sbjct:  281 FVPGAIELAVQNNVFIGGDDFKSGQTKIKSVLMDFLVSAGLKPVSIVSYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDMVQSNPILYGPNEKPDHCVVIKYVPY 385          
BLAST of CF504098 vs. ExPASy Swiss-Prot
Match: INO1_DICDI (Inositol-3-phosphate synthase OS=Dictyostelium discoideum GN=ino1 PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 5.067e-44
Identity = 83/105 (79.05%), Postives = 93/105 (88.57%), Query Frame = 2
Query:    2 FVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPY 316
            FVP ++DLAI+ N  IGGDDFK+GQTK+KSVL D+LV AGIKP SIVSYNHLGNNDG NLSAPQ FRSKEI+KSNVVDDM++SN ILY  GEHPDHV+VIKYVPY
Sbjct:  287 FVPAVVDLAIQHNVSIGGDDFKTGQTKIKSVLTDYLVSAGIKPVSIVSYNHLGNNDGKNLSAPQQFRSKEITKSNVVDDMIASNNILYKQGEHPDHVIVIKYVPY 391          
BLAST of CF504098 vs. ExPASy Swiss-Prot
Match: INO1_CITPA (Inositol-3-phosphate synthase OS=Citrus paradisi PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 4.289e-43
Identity = 92/106 (86.79%), Postives = 92/106 (86.79%), Query Frame = 2
Query:    2 FVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYG-PGEHPDHVVVIKYVPY 316
            FVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSN    G     P     IKYVPY
Sbjct:  287 FVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNVFFMGLVNTRPRW---IKYVPY 389          
BLAST of CF504098 vs. ExPASy Swiss-Prot
Match: INO1_MACFA (Inositol-3-phosphate synthase 1 OS=Macaca fascicularis GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 3.074e-41
Identity = 79/104 (75.96%), Postives = 89/104 (85.58%), Query Frame = 2
Query:    5 VPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPY 316
            VPG ++LA +R   +GGDDFKSGQTK+KSVLVDFL+G+G+K  SIVSYNHLGNNDG NLSAP  FRSKE+SKSNVVDDMV SN +LY PGE PDH VVIKYVPY
Sbjct:  285 VPGALELAWQRRVFVGGDDFKSGQTKVKSVLVDFLIGSGLKTMSIVSYNHLGNNDGENLSAPLQFRSKEVSKSNVVDDMVQSNPVLYAPGEEPDHCVVIKYVPY 388          
The following BLAST results are available for this feature:
BLAST of CF504098 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_ORYSJ3.871e-5295.24Inositol-3-phosphate synthase OS=Oryza sativa subs... [more]
INO1_ARATH3.871e-5294.29Inositol-3-phosphate synthase isozyme 1 OS=Arabido... [more]
INO1_BRANA5.055e-5294.29Inositol-3-phosphate synthase OS=Brassica napus PE... [more]
INO1_PHAVU2.509e-5193.33Inositol-3-phosphate synthase OS=Phaseolus vulgari... [more]
INO1_DROME7.070e-4684.76Inositol-3-phosphate synthase OS=Drosophila melano... [more]
INO1B_XENLA3.509e-4583.81Inositol-3-phosphate synthase 1-B OS=Xenopus laevi... [more]
INO1A_XENLA1.333e-4481.90Inositol-3-phosphate synthase 1-A OS=Xenopus laevi... [more]
INO1_DICDI5.067e-4479.05Inositol-3-phosphate synthase OS=Dictyostelium dis... [more]
INO1_CITPA4.289e-4386.79Inositol-3-phosphate synthase OS=Citrus paradisi P... [more]
INO1_MACFA3.074e-4175.96Inositol-3-phosphate synthase 1 OS=Macaca fascicul... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-586 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-13_G05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504098 ID=CF504098; Name=CF504098; organism=Citrus sinensis; type=EST; length=317bp
CTTTGTACCAGGGCTTATTGACTTGGCTATTAGGAGGAACTGTTTGATTG
GTGGAGATGACTTCAAGAGTGGGCAGACTAAGATGAAATCTGTTTTGGTT
GATTTCCTTGTTGGGGCAGGAATCAAGCCAACATCAATTGTTAGCTACAA
CCACTTGGGAAACAATGATGGAATGAATCTTTCAGCCCCTCAAACCTTCC
GCTCCAAGGAGATTTCCAAAAGTAATGTTGTTGATGACATGGTCTCCAGC
AATGGTATCCTTTATGGGCCTGGTGAACACCCCGACCACGTTGTGGTCAT
CAAGTATGTGCCATATG
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