CF504098

Overview
NameCF504098
Unique NameCF504098
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length317
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8732 contig Csv1_Contig8732:146..462. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504098 vs. ExPASy Swiss-Prot
Match: INO1_BOVIN (Inositol-3-phosphate synthase 1 OS=Bos taurus GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 6.848e-41
Identity = 78/104 (75.00%), Postives = 89/104 (85.58%), Query Frame = 2
Query:    5 VPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPY 316
            VPG ++LA +R   +GGDDFKSGQTK+KSVLVDFL+G+G+K  SIVSYNHLGNNDG NLSAP  FRSKE+SKS+VVDDMV SN +LY PGE PDH VVIKYVPY
Sbjct:  285 VPGALELAWQRRVFVGGDDFKSGQTKVKSVLVDFLIGSGLKTMSIVSYNHLGNNDGQNLSAPPQFRSKEVSKSSVVDDMVHSNPVLYSPGEQPDHCVVIKYVPY 388          
BLAST of CF504098 vs. ExPASy Swiss-Prot
Match: INO1_RAT (Inositol-3-phosphate synthase 1 OS=Rattus norvegicus GN=Isyna1 PE=2 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 8.944e-41
Identity = 77/104 (74.04%), Postives = 90/104 (86.54%), Query Frame = 2
Query:    5 VPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPY 316
            VPG ++LA +R+  +GGDDFKSGQTK+KSVLVDFL+G+G+K  SIVSYNHLGNNDG NLSAP  FRSKE++KS+VVDDMV SN +LY PGE PDH VVIKYVPY
Sbjct:  285 VPGALELASQRHVFVGGDDFKSGQTKVKSVLVDFLIGSGLKTMSIVSYNHLGNNDGQNLSAPLQFRSKEVTKSSVVDDMVQSNRVLYAPGEEPDHCVVIKYVPY 388          
BLAST of CF504098 vs. ExPASy Swiss-Prot
Match: INO1_MOUSE (Inositol-3-phosphate synthase 1 OS=Mus musculus GN=Isyna1 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 1.168e-40
Identity = 77/104 (74.04%), Postives = 90/104 (86.54%), Query Frame = 2
Query:    5 VPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPY 316
            VPG ++LA +R+  +GGDDFKSGQTK+KSVLVDFL+G+G+K  SIVSYNHLGNNDG NLSAP  FRSKE++KS+VVDDMV SN +LY PGE PDH VVIKYVPY
Sbjct:  285 VPGALELASQRHVFVGGDDFKSGQTKVKSVLVDFLIGSGLKTMSIVSYNHLGNNDGQNLSAPLQFRSKEVTKSSVVDDMVHSNHVLYAPGERPDHCVVIKYVPY 388          
BLAST of CF504098 vs. ExPASy Swiss-Prot
Match: INO1_HUMAN (Inositol-3-phosphate synthase 1 OS=Homo sapiens GN=ISYNA1 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.993e-40
Identity = 78/104 (75.00%), Postives = 88/104 (84.62%), Query Frame = 2
Query:    5 VPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPY 316
            VPG ++LA +    +GGDDFKSGQTK+KSVLVDFL+G+G+K  SIVSYNHLGNNDG NLSAP  FRSKE+SKSNVVDDMV SN +LY PGE PDH VVIKYVPY
Sbjct:  285 VPGALELAWQHRVFVGGDDFKSGQTKVKSVLVDFLIGSGLKTMSIVSYNHLGNNDGENLSAPLQFRSKEVSKSNVVDDMVQSNPVLYTPGEEPDHCVVIKYVPY 388          
BLAST of CF504098 vs. ExPASy Swiss-Prot
Match: INO1_CANGA (Inositol-3-phosphate synthase OS=Candida glabrata GN=INO1 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.251e-34
Identity = 73/105 (69.52%), Postives = 84/105 (80.00%), Query Frame = 2
Query:    2 FVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGP--GEHPDHVVVIKYV 310
            FVPGLI+LA + + LI GDDFKSGQTKMKSVL  FLV AGI+P SI SYNHLGNNDG NLS+PQ FRSKEISK++VVDD++ SN ILY    G   DH +VIKY+
Sbjct:  304 FVPGLIELAEKNDSLIAGDDFKSGQTKMKSVLAQFLVDAGIRPVSIASYNHLGNNDGYNLSSPQQFRSKEISKASVVDDIIESNPILYNDKLGNKIDHCIVIKYM 408          
BLAST of CF504098 vs. ExPASy Swiss-Prot
Match: INO1_CANAL (Inositol-3-phosphate synthase OS=Candida albicans GN=INO1 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 2.134e-34
Identity = 71/106 (66.98%), Postives = 85/106 (80.19%), Query Frame = 2
Query:    2 FVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYG--PGEHPDHVVVIKYVP 313
            FVPG+I+LA + +  IGGDDFKSGQTK+KSVL  FLV AGIKP SI SYNHLGNNDG NLS+P+ FRSKEISK +VVDD++ SN +LY    G+  DH +VIKY+P
Sbjct:  293 FVPGVIELAEKYDSFIGGDDFKSGQTKIKSVLAQFLVDAGIKPLSIASYNHLGNNDGYNLSSPKQFRSKEISKQSVVDDIIESNELLYNKESGDKVDHCIVIKYLP 398          
BLAST of CF504098 vs. ExPASy Swiss-Prot
Match: INO1_YEAST (Inositol-3-phosphate synthase OS=Saccharomyces cerevisiae GN=INO1 PE=1 SV=3)

HSP 1 Score: 140.584 bits (353), Expect = 2.359e-33
Identity = 70/105 (66.67%), Postives = 81/105 (77.14%), Query Frame = 2
Query:    2 FVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGP--GEHPDHVVVIKYV 310
            FVPGL+ LA      I GDD KSGQTK+KSVL  FLV AGIKP SI SYNHLGNNDG NLSAP+ FRSKEISKS+V+DD+++SN ILY    G+  DH +VIKY+
Sbjct:  301 FVPGLVQLAEHEGTFIAGDDLKSGQTKLKSVLAQFLVDAGIKPVSIASYNHLGNNDGYNLSAPKQFRSKEISKSSVIDDIIASNDILYNDKLGKKVDHCIVIKYM 405          
The following BLAST results are available for this feature:
BLAST of CF504098 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_BOVIN6.848e-4175.00Inositol-3-phosphate synthase 1 OS=Bos taurus GN=I... [more]
INO1_RAT8.944e-4174.04Inositol-3-phosphate synthase 1 OS=Rattus norvegic... [more]
INO1_MOUSE1.168e-4074.04Inositol-3-phosphate synthase 1 OS=Mus musculus GN... [more]
INO1_HUMAN1.993e-4075.00Inositol-3-phosphate synthase 1 OS=Homo sapiens GN... [more]
INO1_CANGA1.251e-3469.52Inositol-3-phosphate synthase OS=Candida glabrata ... [more]
INO1_CANAL2.134e-3466.98Inositol-3-phosphate synthase OS=Candida albicans ... [more]
INO1_YEAST2.359e-3366.67Inositol-3-phosphate synthase OS=Saccharomyces cer... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-586 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-13_G05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504098 ID=CF504098; Name=CF504098; organism=Citrus sinensis; type=EST; length=317bp
CTTTGTACCAGGGCTTATTGACTTGGCTATTAGGAGGAACTGTTTGATTG
GTGGAGATGACTTCAAGAGTGGGCAGACTAAGATGAAATCTGTTTTGGTT
GATTTCCTTGTTGGGGCAGGAATCAAGCCAACATCAATTGTTAGCTACAA
CCACTTGGGAAACAATGATGGAATGAATCTTTCAGCCCCTCAAACCTTCC
GCTCCAAGGAGATTTCCAAAAGTAATGTTGTTGATGACATGGTCTCCAGC
AATGGTATCCTTTATGGGCCTGGTGAACACCCCGACCACGTTGTGGTCAT
CAAGTATGTGCCATATG
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