CF504117

Overview
NameCF504117
Unique NameCF504117
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length450
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504117 vs. ExPASy Swiss-Prot
Match: CHS2_SOLLC (Chalcone synthase 2 OS=Solanum lycopersicum GN=CHS2 PE=2 SV=2)

HSP 1 Score: 256.914 bits (655), Expect = 2.772e-68
Identity = 121/142 (85.21%), Postives = 133/142 (93.66%), Query Frame = 3
Query:   24 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADY 449
            M TV+E+R AQRA GPAT++AIGTATP++ V+Q+ YPDYYFRIT SEHMTELKEKFKRMCDKSMI KRYM+LTEEILKENPN+C YMAPSLDARQDIVVVEVPKLGKEAA KAIKEWGQPKSKITH++FCTTSGVDMPGADY
Sbjct:    1 MVTVEEVRRAQRAKGPATIMAIGTATPSNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMINKRYMHLTEEILKENPNICEYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHVVFCTTSGVDMPGADY 142          
BLAST of CF504117 vs. ExPASy Swiss-Prot
Match: CHSY_VIGUN (Chalcone synthase OS=Vigna unguiculata GN=CHS PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 3.621e-68
Identity = 122/142 (85.92%), Postives = 134/142 (94.37%), Query Frame = 3
Query:   24 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADY 449
            M +V EIR AQRA+GPAT+LAIGTATP + V+Q+ YPDYYFRIT SEHMT+LKEKF+RMCDKSMIKKRYM++TEEILKENP+MCAYMAPSLDARQDIVVVEVP+LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADY
Sbjct:    1 MVSVSEIRQAQRAEGPATILAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYMHVTEEILKENPSMCAYMAPSLDARQDIVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADY 142          
BLAST of CF504117 vs. ExPASy Swiss-Prot
Match: CHS1_CAMSI (Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 3.621e-68
Identity = 122/142 (85.92%), Postives = 132/142 (92.96%), Query Frame = 3
Query:   24 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADY 449
            M TV++IR AQRA+GPATV+AIGTATP + V+Q+ YPDYYFRIT SEH  ELKEKFKRMCDKSMIKKRYMYLTEEILKENP +C YMAPSLDARQD+VVVEVPKLGKEAATKAIKEWGQPKSKITHL+FCTTSGVDMPGADY
Sbjct:    1 MVTVEDIRRAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHKAELKEKFKRMCDKSMIKKRYMYLTEEILKENPQVCEYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADY 142          
BLAST of CF504117 vs. ExPASy Swiss-Prot
Match: CHS6_SOYBN (Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 4.729e-68
Identity = 122/142 (85.92%), Postives = 133/142 (93.66%), Query Frame = 3
Query:   24 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADY 449
            M +V+EIR AQRA+GPATV+AIGTATP + V+Q+ YPDYYFRIT S+HM ELKEKFKRMCDKSMIKKRYMYL EEILKENP++CAYM PSLDARQD+VVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADY
Sbjct:    1 MVSVEEIRKAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSDHMNELKEKFKRMCDKSMIKKRYMYLNEEILKENPSVCAYMEPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADY 142          
BLAST of CF504117 vs. ExPASy Swiss-Prot
Match: CHSY_HYPAN (Chalcone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 6.176e-68
Identity = 121/142 (85.21%), Postives = 130/142 (91.55%), Query Frame = 3
Query:   24 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADY 449
            M TV+E+R AQRA+GPATV+AIGTA P + V+QA YPDYYFRIT SEH  ELKEKF+RMCDKS IKKRYMYL EE+LKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADY
Sbjct:    1 MVTVEEVRKAQRAEGPATVMAIGTAVPPNCVDQATYPDYYFRITNSEHKAELKEKFQRMCDKSQIKKRYMYLNEEVLKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADY 142          
BLAST of CF504117 vs. ExPASy Swiss-Prot
Match: CHSB_PEA (Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE=3 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 6.176e-68
Identity = 123/142 (86.62%), Postives = 133/142 (93.66%), Query Frame = 3
Query:   24 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADY 449
            M TV EIR AQ+A+GPATVLAIGTATP + V+Q+ YPDYYFRIT SEH TELKEKF+RMCDKSMIKKRYM+LTEEILKENP++C YMAPSLDARQD+VVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADY
Sbjct:    1 MVTVDEIRQAQKAEGPATVLAIGTATPPNCVDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYMHLTEEILKENPSVCEYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADY 142          
BLAST of CF504117 vs. ExPASy Swiss-Prot
Match: CHSE_IPOPU (Chalcone synthase E OS=Ipomoea purpurea GN=CHSE PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 8.066e-68
Identity = 120/142 (84.51%), Postives = 132/142 (92.96%), Query Frame = 3
Query:   24 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADY 449
            M TV+E+R AQRA GPAT++AIGT+TP + V+Q+ YPDYYFRIT SEH+ ELKEKFKRMC+KSMIKKRYMYLTEEIL ENPN+CAYMAPSLDARQDIVVVEVPKLGKEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADY
Sbjct:    1 MVTVEEVRKAQRAQGPATIMAIGTSTPQNCVDQSTYPDYYFRITNSEHLVELKEKFKRMCEKSMIKKRYMYLTEEILTENPNICAYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADY 142          
BLAST of CF504117 vs. ExPASy Swiss-Prot
Match: CHS2_MAIZE (Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 8.066e-68
Identity = 121/140 (86.43%), Postives = 132/140 (94.29%), Query Frame = 3
Query:   30 TVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADY 449
            TV+E+R AQRA GPATVLAIGTATPA+ V QADYPDYYFRITKSEH+T+LKEKFKRMCDKSMI+KRYM+LTEE L ENP+MCAYMAPSLDARQD+VVVEVPKLGK AA KAIKEWGQPKS+ITHL+FCTTSGVDMPGADY
Sbjct:    7 TVEEVRKAQRATGPATVLAIGTATPANCVYQADYPDYYFRITKSEHLTDLKEKFKRMCDKSMIRKRYMHLTEEFLAENPSMCAYMAPSLDARQDVVVVEVPKLGKAAAQKAIKEWGQPKSRITHLVFCTTSGVDMPGADY 146          
BLAST of CF504117 vs. ExPASy Swiss-Prot
Match: CHSY_DIAMO (Chalcone synthase OS=Dianthus monspessulanus GN=CHS PE=2 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 1.053e-67
Identity = 119/142 (83.80%), Postives = 132/142 (92.96%), Query Frame = 3
Query:   24 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADY 449
            MA+++EIR AQRADGPAT+LAIGTATP +++ QADYPDYYFR+TKSEHMTELKEKF+RMCDKSMIKKRYMYLTEEILKENPN+C YM  SLD RQD+VV EVP+LGKEAA KAIKEWGQPKSKITH+I CTTSGVDMPGADY
Sbjct:    1 MASIEEIRQAQRADGPATILAIGTATPPNAIYQADYPDYYFRVTKSEHMTELKEKFRRMCDKSMIKKRYMYLTEEILKENPNLCEYMGSSLDTRQDMVVSEVPRLGKEAAVKAIKEWGQPKSKITHVIMCTTSGVDMPGADY 142          
BLAST of CF504117 vs. ExPASy Swiss-Prot
Match: CHS7_SOYBN (Chalcone synthase 7 OS=Glycine max GN=CHS7 PE=3 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 1.053e-67
Identity = 122/142 (85.92%), Postives = 131/142 (92.25%), Query Frame = 3
Query:   24 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADY 449
            M +V EIR AQRA+GPAT+LAIGTA P + V+Q+ YPDYYFRIT S+HMTELKEKF+RMCDKSMIK RYMYL EEILKENPNMCAYMAPSLDARQD+VVVEVPKLGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADY
Sbjct:    1 MVSVAEIRQAQRAEGPATILAIGTANPPNRVDQSTYPDYYFRITNSDHMTELKEKFQRMCDKSMIKTRYMYLNEEILKENPNMCAYMAPSLDARQDMVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADY 142          
The following BLAST results are available for this feature:
BLAST of CF504117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CHS2_SOLLC2.772e-6885.21Chalcone synthase 2 OS=Solanum lycopersicum GN=CHS... [more]
CHSY_VIGUN3.621e-6885.92Chalcone synthase OS=Vigna unguiculata GN=CHS PE=2... [more]
CHS1_CAMSI3.621e-6885.92Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 P... [more]
CHS6_SOYBN4.729e-6885.92Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV... [more]
CHSY_HYPAN6.176e-6885.21Chalcone synthase OS=Hypericum androsaemum PE=1 SV... [more]
CHSB_PEA6.176e-6886.62Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE... [more]
CHSE_IPOPU8.066e-6884.51Chalcone synthase E OS=Ipomoea purpurea GN=CHSE PE... [more]
CHS2_MAIZE8.066e-6886.43Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1[more]
CHSY_DIAMO1.053e-6783.80Chalcone synthase OS=Dianthus monspessulanus GN=CH... [more]
CHS7_SOYBN1.053e-6785.92Chalcone synthase 7 OS=Glycine max GN=CHS7 PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-605 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-14_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504117 ID=CF504117; Name=CF504117; organism=Citrus sinensis; type=EST; length=450bp
ATTCATTAAGGGTTCAACTTGAAATGGCAACCGTTCAAGAGATCAGAAAC
GCTCAGCGTGCCGACGGCCCGGCCACCGTCCTCGCCATCGGTACGGCCAC
GCCTGCCCACAGTGTCAACCAGGCTGATTATCCCGACTATTACTTCAGGA
TCACAAAGAGCGAGCATATGACGGAGCTTAAAGAGAAGTTCAAGCGCATG
TGTGACAAGTCGATGATTAAGAAGCGTTACATGTACTTAACGGAAGAGAT
TTTGAAGGAAAACCCCAACATGTGCGCTTACATGGCTCCATCACTCGACG
CACGTCAAGACATTGTGGTGGTCGAAGTGCCGAAGCTCGGGAAAGAAGCT
GCTACAAAGGCCATCAAAGAATGGGGCCAGCCCAAGTCTAAGATCACCCA
CCTCATCTTCTGCACCACCTCCGGCGTCGACATGCCCGGCGCCGACTACC
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