CF504131
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504131 vs. ExPASy Swiss-Prot
Match: METK_BRARP (S-adenosylmethionine synthetase OS=Brassica rapa subsp. pekinensis GN=SAMS PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.400e-23 Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = 2 Query: 92 GRFLKTAAYGHFGRDDPDFTWEIVKPLK*EK 184 GRFLKTAAYGHFGRDDPDFTWE+VKPLK +K Sbjct: 360 GRFLKTAAYGHFGRDDPDFTWEVVKPLKWDK 390 HSP 2 Score: 60.8474 bits (146), Expect = 7.400e-23 Identity = 28/35 (80.00%), Postives = 33/35 (94.29%), Query Frame = 1 Query: 1 DKEILKIVKENFDFRPGMISINLDLKRGGNRQVLE 105 DKEILKIVKE+FDFRPGM++INLDLKRGGN + L+ Sbjct: 330 DKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLK 364
BLAST of CF504131 vs. ExPASy Swiss-Prot
Match: METK5_BRAJU (S-adenosylmethionine synthetase 5 OS=Brassica juncea GN=MSAMS5 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.400e-23 Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = 2 Query: 92 GRFLKTAAYGHFGRDDPDFTWEIVKPLK*EK 184 GRFLKTAAYGHFGRDDPDFTWE+VKPLK +K Sbjct: 360 GRFLKTAAYGHFGRDDPDFTWEVVKPLKWDK 390 HSP 2 Score: 60.8474 bits (146), Expect = 7.400e-23 Identity = 28/35 (80.00%), Postives = 33/35 (94.29%), Query Frame = 1 Query: 1 DKEILKIVKENFDFRPGMISINLDLKRGGNRQVLE 105 DKEILKIVKE+FDFRPGM++INLDLKRGGN + L+ Sbjct: 330 DKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLK 364
BLAST of CF504131 vs. ExPASy Swiss-Prot
Match: METK3_BRAJU (S-adenosylmethionine synthetase 3 OS=Brassica juncea GN=MSAMS3 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.400e-23 Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = 2 Query: 92 GRFLKTAAYGHFGRDDPDFTWEIVKPLK*EK 184 GRFLKTAAYGHFGRDDPDFTWE+VKPLK +K Sbjct: 360 GRFLKTAAYGHFGRDDPDFTWEVVKPLKWDK 390 HSP 2 Score: 60.8474 bits (146), Expect = 7.400e-23 Identity = 28/35 (80.00%), Postives = 33/35 (94.29%), Query Frame = 1 Query: 1 DKEILKIVKENFDFRPGMISINLDLKRGGNRQVLE 105 DKEILKIVKE+FDFRPGM++INLDLKRGGN + L+ Sbjct: 330 DKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLK 364
BLAST of CF504131 vs. ExPASy Swiss-Prot
Match: METK1_BRAJU (S-adenosylmethionine synthetase 1 OS=Brassica juncea GN=SAMS1 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.400e-23 Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = 2 Query: 92 GRFLKTAAYGHFGRDDPDFTWEIVKPLK*EK 184 GRFLKTAAYGHFGRDDPDFTWE+VKPLK +K Sbjct: 360 GRFLKTAAYGHFGRDDPDFTWEVVKPLKWDK 390 HSP 2 Score: 60.8474 bits (146), Expect = 7.400e-23 Identity = 28/35 (80.00%), Postives = 33/35 (94.29%), Query Frame = 1 Query: 1 DKEILKIVKENFDFRPGMISINLDLKRGGNRQVLE 105 DKEILKIVKE+FDFRPGM++INLDLKRGGN + L+ Sbjct: 330 DKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLK 364
BLAST of CF504131 vs. ExPASy Swiss-Prot
Match: METK1_ARATH (S-adenosylmethionine synthetase 1 OS=Arabidopsis thaliana GN=SAM1 PE=1 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 7.400e-23 Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = 2 Query: 92 GRFLKTAAYGHFGRDDPDFTWEIVKPLK*EK 184 GRFLKTAAYGHFGRDDPDFTWE+VKPLK +K Sbjct: 360 GRFLKTAAYGHFGRDDPDFTWEVVKPLKWDK 390 HSP 2 Score: 60.8474 bits (146), Expect = 7.400e-23 Identity = 28/35 (80.00%), Postives = 33/35 (94.29%), Query Frame = 1 Query: 1 DKEILKIVKENFDFRPGMISINLDLKRGGNRQVLE 105 DKEILKIVKE+FDFRPGM++INLDLKRGGN + L+ Sbjct: 330 DKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLK 364
BLAST of CF504131 vs. ExPASy Swiss-Prot
Match: METK2_SOLLC (S-adenosylmethionine synthetase 2 OS=Solanum lycopersicum GN=SAM2 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 9.629e-23 Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = 2 Query: 92 GRFLKTAAYGHFGRDDPDFTWEIVKPLK*EK 184 GRFLKTAAYGHFGRDDPDFTWE+VKPLK +K Sbjct: 360 GRFLKTAAYGHFGRDDPDFTWEVVKPLKWDK 390 HSP 2 Score: 60.4622 bits (145), Expect = 9.629e-23 Identity = 29/35 (82.86%), Postives = 31/35 (88.57%), Query Frame = 1 Query: 1 DKEILKIVKENFDFRPGMISINLDLKRGGNRQVLE 105 DKEIL IVKENFDFRPGMISINLDL RGGN + L+ Sbjct: 330 DKEILNIVKENFDFRPGMISINLDLLRGGNGRFLK 364
BLAST of CF504131 vs. ExPASy Swiss-Prot
Match: METK_MEDTR (S-adenosylmethionine synthetase OS=Medicago truncatula GN=METK PE=3 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 9.629e-23 Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 2 Query: 95 RFLKTAAYGHFGRDDPDFTWEIVKPLK*EK 184 RFLKTAAYGHFGRDDPDFTWE+VKPLK EK Sbjct: 362 RFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 391 HSP 2 Score: 61.6178 bits (148), Expect = 9.629e-23 Identity = 28/35 (80.00%), Postives = 33/35 (94.29%), Query Frame = 1 Query: 1 DKEILKIVKENFDFRPGMISINLDLKRGGNRQVLE 105 D+EIL+IVKENFDFRPGMI+INLDLKRGGN + L+ Sbjct: 331 DREILQIVKENFDFRPGMITINLDLKRGGNSRFLK 365
BLAST of CF504131 vs. ExPASy Swiss-Prot
Match: METK2_ORYSJ (S-adenosylmethionine synthetase 2 OS=Oryza sativa subsp. japonica GN=SAM2 PE=2 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 1.253e-22 Identity = 29/31 (93.55%), Postives = 31/31 (100.00%), Query Frame = 1 Query: 1 DKEILKIVKENFDFRPGMISINLDLKRGGNR 93 DKEILKIVKENFDFRPGM++INLDLKRGGNR Sbjct: 332 DKEILKIVKENFDFRPGMMTINLDLKRGGNR 362 HSP 2 Score: 62.7734 bits (151), Expect = 1.253e-22 Identity = 26/30 (86.67%), Postives = 29/30 (96.67%), Query Frame = 2 Query: 95 RFLKTAAYGHFGRDDPDFTWEIVKPLK*EK 184 RF+KTAAYGHFGR+DPDFTWE+VKPLK EK Sbjct: 362 RFIKTAAYGHFGREDPDFTWEVVKPLKYEK 391
BLAST of CF504131 vs. ExPASy Swiss-Prot
Match: METK2_PETCR (S-adenosylmethionine synthetase 2 (Fragment) OS=Petroselinum crispum GN=SMS-2 PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 1.678e-22 Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = 2 Query: 92 GRFLKTAAYGHFGRDDPDFTWEIVKPLK*EK 184 GRFLKTAAYGHFGR+DPDFTWE+VKPLK EK Sbjct: 114 GRFLKTAAYGHFGREDPDFTWEVVKPLKWEK 144 HSP 2 Score: 60.077 bits (144), Expect = 1.678e-22 Identity = 28/35 (80.00%), Postives = 32/35 (91.43%), Query Frame = 1 Query: 1 DKEILKIVKENFDFRPGMISINLDLKRGGNRQVLE 105 D+EIL+IVKE FDFRPGMISINLDLKRGGN + L+ Sbjct: 84 DREILQIVKETFDFRPGMISINLDLKRGGNGRFLK 118
BLAST of CF504131 vs. ExPASy Swiss-Prot
Match: METK4_ARATH (S-adenosylmethionine synthetase 4 OS=Arabidopsis thaliana GN=METK4 PE=1 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 2.121e-22 Identity = 28/34 (82.35%), Postives = 30/34 (88.24%), Query Frame = 2 Query: 92 GRFLKTAAYGHFGRDDPDFTWEIVKPLK*EKLPA 193 GRFLKTAAYGHFGRDD DFTWE+VKPLK K+ A Sbjct: 360 GRFLKTAAYGHFGRDDADFTWEVVKPLKSNKVQA 393 HSP 2 Score: 61.6178 bits (148), Expect = 2.121e-22 Identity = 29/35 (82.86%), Postives = 33/35 (94.29%), Query Frame = 1 Query: 1 DKEILKIVKENFDFRPGMISINLDLKRGGNRQVLE 105 DKEIL+IVKE+FDFRPGMISINLDLKRGGN + L+ Sbjct: 330 DKEILEIVKESFDFRPGMISINLDLKRGGNGRFLK 364 The following BLAST results are available for this feature:
BLAST of CF504131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504131 ID=CF504131; Name=CF504131; organism=Citrus sinensis; type=EST; length=342bpback to top |