CF504213
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504213 vs. ExPASy Swiss-Prot
Match: RS7_CAEEL (40S ribosomal protein S7 OS=Caenorhabditis elegans GN=rps-7 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 9.807e-31 Identity = 62/113 (54.87%), Postives = 86/113 (76.11%), Query Frame = -1 Query: 214 LVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQS-----PRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYP 537 LVRELEKKF G+D++++A RRI+ P++GS + PRSRTLTAVHDA L+++VYPAE+VG+R+R +LDG K+ K+ LD + N +K+ F+ VYRKLTGKDV F++P Sbjct: 78 LVRELEKKFGGRDILILAKRRILPKPQRGSKARPQKQKRPRSRTLTAVHDAWLDELVYPAEVVGRRIRVKLDGKKVYKVHLDKSHQTNVGHKIGVFASVYRKLTGKDVTFEFP 190
BLAST of CF504213 vs. ExPASy Swiss-Prot
Match: RS7_SCHPO (40S ribosomal protein S7 OS=Schizosaccharomyces pombe GN=rps7 PE=1 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 1.281e-30 Identity = 65/113 (57.52%), Postives = 85/113 (75.22%), Query Frame = -1 Query: 211 SRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV--QSPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPI 543 +RL RELEKKF+ + V+ IA RRI+ P + S V + PRSRTLTAVH+A+LED+V+P EI+GKR R DG K IK+FLD ++ N +YKL SFS VY KLTGK+V F++P+ Sbjct: 77 ARLTRELEKKFADRHVIFIAQRRILPKPGRKSRVTQKRPRSRTLTAVHNAILEDIVFPTEIIGKRTRQATDGRKTIKVFLDNRDANTVDYKLGSFSSVYHKLTGKNVTFEFPV 189
BLAST of CF504213 vs. ExPASy Swiss-Prot
Match: RS7_DROME (40S ribosomal protein S7 OS=Drosophila melanogaster GN=RpS7 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.853e-30 Identity = 63/112 (56.25%), Postives = 90/112 (80.36%), Query Frame = -1 Query: 214 LVRELEKKFSGKDVVLIATRRIVRPPKKGSA----VQSPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYP 537 LVRELEKKFSGK VV+IA R+I+ P + + + PRSRTLTAV+DA+LED+V+PAEIVGKR+R +LDGS+++K+ LD ++ E+K+++F+ VY+KLTG+DV F++P Sbjct: 77 LVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRDVTFEFP 188
BLAST of CF504213 vs. ExPASy Swiss-Prot
Match: RS7_SPOFR (40S ribosomal protein S7 OS=Spodoptera frugiperda GN=RpS7 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 6.357e-30 Identity = 63/113 (55.75%), Postives = 88/113 (77.88%), Query Frame = -1 Query: 214 RLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQS----PRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYP 540 RLVRELEKKFSGK VV I R+I+ P + V + PRSRTLT+V+DA+LED+V+PAEIVGKR+R +LDGS++IK+ LD ++ E+K+++F VY+KLTG++V F++P Sbjct: 74 RLVRELEKKFSGKHVVFIGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRIKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFP 186
BLAST of CF504213 vs. ExPASy Swiss-Prot
Match: RS7_MANSE (40S ribosomal protein S7 OS=Manduca sexta GN=RpS7 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 6.357e-30 Identity = 63/113 (55.75%), Postives = 88/113 (77.88%), Query Frame = -1 Query: 214 RLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQS----PRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYP 540 RLVRELEKKFSGK VV I R+I+ P + V + PRSRTLT+V+DA+LED+V+PAEIVGKR+R +LDGS++IK+ LD ++ E+K+++F VY+KLTG++V F++P Sbjct: 74 RLVRELEKKFSGKHVVFIGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFP 186
BLAST of CF504213 vs. ExPASy Swiss-Prot
Match: RS7_DROYA (40S ribosomal protein S7 OS=Drosophila yakuba GN=RpS7 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 8.302e-30 Identity = 62/112 (55.36%), Postives = 89/112 (79.46%), Query Frame = -1 Query: 214 LVRELEKKFSGKDVVLIATRRIVRPPKKGSA----VQSPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYP 537 LVRELEKKFSGK VV+I R+I+ P + + + PRSRTLTAV+DA+LED+V+PAEIVGKR+R +LDGS+++K+ LD ++ E+K+++F+ VY+KLTG+DV F++P Sbjct: 77 LVRELEKKFSGKHVVVIGERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRDVTFEFP 188
BLAST of CF504213 vs. ExPASy Swiss-Prot
Match: RS7A_YEAST (40S ribosomal protein S7-A OS=Saccharomyces cerevisiae GN=RPS7A PE=1 SV=4) HSP 1 Score: 125.946 bits (315), Expect = 1.199e-28 Identity = 63/112 (56.25%), Postives = 81/112 (72.32%), Query Frame = -1 Query: 214 SRLVRELEKKFSGKDVVLIATRRIVRPPKKGS--AVQSPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYP 543 ++L RELEKKF + V+ +A RRI+ P + S + PRSRTLTAVHD +LED+V+P EIVGKRVRY + G+KI K+ LD K+ +YKLESF VY KLTGK +VF+ P Sbjct: 75 TKLTRELEKKFQDRHVIFLAERRILPKPSRTSRQVQKRPRSRTLTAVHDKILEDLVFPTEIVGKRVRYLVGGNKIQKVLLDSKDVQQIDYKLESFQAVYNKLTGKQIVFEIP 186
BLAST of CF504213 vs. ExPASy Swiss-Prot
Match: RS7B_YEAST (40S ribosomal protein S7-B OS=Saccharomyces cerevisiae GN=RPS7B PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.566e-28 Identity = 63/112 (56.25%), Postives = 81/112 (72.32%), Query Frame = -1 Query: 214 SRLVRELEKKFSGKDVVLIATRRIVRPPKKGS--AVQSPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYP 543 ++L RELEKKF + V+ +A RRI+ P + S + PRSRTLTAVHD +LED+V+P EIVGKRVRY + G+KI K+ LD K+ +YKLESF VY KLTGK +VF+ P Sbjct: 75 TKLTRELEKKFPDRHVIFLAERRILPKPSRTSRQVQKRPRSRTLTAVHDKVLEDMVFPTEIVGKRVRYLVGGNKIQKVLLDSKDVQQIDYKLESFQAVYNKLTGKQIVFEIP 186
BLAST of CF504213 vs. ExPASy Swiss-Prot
Match: RS7_DICDI (40S ribosomal protein S7 OS=Dictyostelium discoideum GN=rps7 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.122e-26 Identity = 60/111 (54.05%), Postives = 82/111 (73.87%), Query Frame = -1 Query: 217 RLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQS---PRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDY 540 +L E+EKK GK V+ IA RRI+R P + ++ P SRT+ AVHDA+L+D+V+P IVG+R+RYRLDGSK+ KI+LD KE + K++SFS VY KLTGK+VVF++ Sbjct: 76 KLTYEVEKKLGGKQVMFIAQRRIIRKPASNNKIKMQKRPISRTIKAVHDAILDDLVFPNTIVGRRLRYRLDGSKLHKIYLDRKEMLSNISKVDSFSAVYHKLTGKEVVFEF 186 The following BLAST results are available for this feature:
BLAST of CF504213 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504213 ID=CF504213; Name=CF504213; organism=Citrus sinensis; type=EST; length=543bpback to top |