CF504216

Overview
NameCF504216
Unique NameCF504216
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length437
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504216 vs. ExPASy Swiss-Prot
Match: METE_CHRSD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=metE PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.544e-28
Identity = 64/110 (58.18%), Postives = 76/110 (69.09%), Query Frame = 1
Query:    1 CYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 330
            CYS FNDII +I  +DADVITIE SRSD +LL  F++   Y   IGPGVYDIHSP IP  E +   + K    +    LWVNPDCGLKTR + EV+PAL+NMV AA+ LR
Sbjct:  649 CYSEFNDIIAAIAALDADVITIETSRSDMELLDAFQD-FAYPNEIGPGVYDIHSPNIPEVEWMVSLMEKAAEKIPAERLWVNPDCGLKTRGWAEVEPALANMVEAARELR 757          
BLAST of CF504216 vs. ExPASy Swiss-Prot
Match: METE_BUCCC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Buchnera aphidicola subsp. Cinara cedri GN=metE PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.544e-28
Identity = 62/112 (55.36%), Postives = 75/112 (66.96%), Query Frame = 1
Query:    1 CYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 336
            CY  FNDI+ +I+D+DADVITIE SRSD +LL  F+   KY   IGPGVYDIHSP IPS + I   + K L  +    LWVNPDCGLKTR +TE   AL NM+ A   +R +
Sbjct:  646 CYCEFNDIMPAIVDLDADVITIETSRSDMELLEFFKT-FKYPNAIGPGVYDIHSPNIPSVQSIEKLLKKALKYISIQQLWVNPDCGLKTRNWTETSLALQNMLQATLNIRKE 756          
BLAST of CF504216 vs. ExPASy Swiss-Prot
Match: METE_RALSO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia solanacearum GN=metE PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.322e-28
Identity = 65/116 (56.03%), Postives = 78/116 (67.24%), Query Frame = 1
Query:    1 CYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASA 348
            CYS FNDI+ +I  MDADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSPR+P  EE+   ++K   V+    LWVNPDCGLKTR + EV+ AL  MV A + LR + A A
Sbjct:  644 CYSEFNDILPAIASMDADVITIETSRSNMELLDAFGE-FAYPNEIGPGVYDIHSPRVPRVEEMEALLDKAAQVVPVQRLWVNPDCGLKTRGWPEVEAALRGMVEATRRLRARHAGA 758          
BLAST of CF504216 vs. ExPASy Swiss-Prot
Match: METE_RALPJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia pickettii (strain 12J) GN=metE PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.322e-28
Identity = 64/117 (54.70%), Postives = 79/117 (67.52%), Query Frame = 1
Query:    1 CYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASAK 351
            CYS FNDI+ +I  MDADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSPR+P  +E+   ++K   V+    LWVNPDCGLKTR + EV+ AL  +V A   LR + A+AK
Sbjct:  647 CYSEFNDILPAIASMDADVITIETSRSNMELLDAFAE-FAYPNEIGPGVYDIHSPRVPRVDEMESLLDKAAQVVPVQRLWVNPDCGLKTRGWPEVEAALQGIVEATHRLRAKHANAK 762          
BLAST of CF504216 vs. ExPASy Swiss-Prot
Match: METE_THEYD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=metE PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.339e-28
Identity = 59/110 (53.64%), Postives = 81/110 (73.64%), Query Frame = 1
Query:    1 CYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 330
            CYS+FN+II  I  +DADVI+IE SRS  ++LS F E  +Y  GIG GVYDIHSPR+PS EE+ + I + +++++ ++ W+NPDCGLKTR + E   +L NMV AAK +R
Sbjct:  633 CYSDFNEIIDRIYALDADVISIEASRSKGEILSAF-ENFRYDHGIGLGVYDIHSPRVPSVEEMIEIIERSVSLIDKSLFWINPDCGLKTRGWQETVASLKNMVLAAKAMR 741          
BLAST of CF504216 vs. ExPASy Swiss-Prot
Match: METE_ACTPJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=metE PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.667e-28
Identity = 64/114 (56.14%), Postives = 76/114 (66.67%), Query Frame = 1
Query:    1 CYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 342
            CYS FNDI+ +I  +DADVITIE SRSD +LL+ F +  KY   IGPGVYDIHSPR+P+  EI   + K L V+    LWVNPDCGLKTR + E    L  MV   K LR +LA
Sbjct:  644 CYSEFNDILPAIAGLDADVITIETSRSDMELLTAFAD-FKYPNDIGPGVYDIHSPRVPTAGEIEHLLRKALKVIPKERLWVNPDCGLKTRGWKETIEQLQVMVEVTKKLRAELA 756          
BLAST of CF504216 vs. ExPASy Swiss-Prot
Match: METE_ACTP7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=metE PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.667e-28
Identity = 64/114 (56.14%), Postives = 76/114 (66.67%), Query Frame = 1
Query:    1 CYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 342
            CYS FNDI+ +I  +DADVITIE SRSD +LL+ F +  KY   IGPGVYDIHSPR+P+  EI   + K L V+    LWVNPDCGLKTR + E    L  MV   K LR +LA
Sbjct:  644 CYSEFNDILPAIAGLDADVITIETSRSDMELLTAFAD-FKYPNDIGPGVYDIHSPRVPTAGEIEHLLRKALKVIPKERLWVNPDCGLKTRGWKETIEQLQVMVEVTKKLRAELA 756          
BLAST of CF504216 vs. ExPASy Swiss-Prot
Match: METE_ACTP2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=metE PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.667e-28
Identity = 64/114 (56.14%), Postives = 76/114 (66.67%), Query Frame = 1
Query:    1 CYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 342
            CYS FNDI+ +I  +DADVITIE SRSD +LL+ F +  KY   IGPGVYDIHSPR+P+  EI   + K L V+    LWVNPDCGLKTR + E    L  MV   K LR +LA
Sbjct:  644 CYSEFNDILPAIAGLDADVITIETSRSDMELLTAFAD-FKYPNDIGPGVYDIHSPRVPTAGEIEHLLRKALKVIPKERLWVNPDCGLKTRGWKETIEQLQVMVEVTKKLRAELA 756          
BLAST of CF504216 vs. ExPASy Swiss-Prot
Match: METE_SODGM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Sodalis glossinidius (strain morsitans) GN=metE PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 7.401e-28
Identity = 62/112 (55.36%), Postives = 76/112 (67.86%), Query Frame = 1
Query:    1 CYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 336
            CY  FNDI+ SI  +DADVITIE SRSD +LL  F+E   Y   IGPGVYDIHSP +PS E I + + K    +    LWVNPDCGLKTR + E + +L+NMV AA+ LR +
Sbjct:  646 CYCEFNDIMDSIAALDADVITIETSRSDMELLETFKE-FDYPNEIGPGVYDIHSPNVPSEEWIVELLRKAAQRIPAERLWVNPDCGLKTRAWPETRQSLANMVTAARKLREE 756          
BLAST of CF504216 vs. ExPASy Swiss-Prot
Match: METE_PHOPR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Photobacterium profundum GN=metE PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 7.401e-28
Identity = 63/112 (56.25%), Postives = 74/112 (66.07%), Query Frame = 1
Query:    1 CYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 336
            CYS FN II S+  +DADVITIE SRSD +LL  F E   Y   IGPGVYDIHSP IPS E+I   + K   ++    LW+NPDCGLKTR + E + AL +MV A K LR Q
Sbjct:  650 CYSEFNHIIKSVAALDADVITIETSRSDMELLKAFEE-FDYPNEIGPGVYDIHSPNIPSIEQIVHLVEKAETLIPIERLWINPDCGLKTRNWEETEAALRSMVEATKKLREQ 760          
The following BLAST results are available for this feature:
BLAST of CF504216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_CHRSD2.544e-2858.185-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BUCCC2.544e-2855.365-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALSO3.322e-2856.035-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALPJ3.322e-2854.705-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_THEYD4.339e-2853.645-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACTPJ5.667e-2856.145-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACTP75.667e-2856.145-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACTP25.667e-2856.145-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SODGM7.401e-2855.365-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PHOPR7.401e-2856.255-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-705 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-15_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504216 ID=CF504216; Name=CF504216; organism=Citrus sinensis; type=EST; length=437bp
TGCTACTCCAACTTCAACGACATTATCCACTCAATTATCGACATGGATGC
TGATGTGATCACCATTGAGAACTCTCGTTCTGATGAGAAGCTCCTGTCTG
TCTTCCGTGAGGGAGTCAAGTATGGTGCTGGAATTGGCCCTGGTGTGTAT
GACATCCACTCTCCAAGAATACCATCAACTGAAGAAATTGCTGACAGAAT
CAACAAGATGCTTGCTGTGCTAGAAACCAACATTTTGTGGGTTAACCCTG
ACTGTGGTCTTAAGACTCGCAAGTACACTGAGGTGAAGCCAGCCCTCTCA
AACATGGTCGCTGCTGCCAAGCTACTCCGCACCCAGCTTGCCAGTGCCAA
GTGAGTGGTTCTGGAGATTGGAGGGATACTTCCTGAGCCATTGATTTTTT
TTTTTTTCACTTTAAACAAAGAAAGAAAATTCCTGTC
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