CF504219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2A1_YEAST (Histone H2A.1 OS=Saccharomyces cerevisiae GN=HTA1 PE=1 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 8.359e-28 Identity = 62/103 (60.19%), Postives = 72/103 (69.90%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 500 SRS KAGL FPVGR+ R L++G Y+QR+G+GAP GNAARDNKK RIIPRH+ LA+RND+EL KLL VTIA GGVLPNI+ LLPK Sbjct: 18 SRSAKAGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPK 120
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2A2_CANGA (Histone H2A.2 OS=Candida glabrata GN=HTA2 PE=3 SV=3) HSP 1 Score: 122.094 bits (305), Expect = 1.426e-27 Identity = 61/103 (59.22%), Postives = 73/103 (70.87%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 500 +RS KAGL FPVGR+ R L++G Y+QR+G+GAP GNAARDNKK+RIIPRH+ LA+RND+EL KLL VTIA GGVLPNI+ LLPK Sbjct: 18 TRSAKAGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPK 120
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2A1_CANGA (Histone H2A.1 OS=Candida glabrata GN=HTA1 PE=3 SV=3) HSP 1 Score: 122.094 bits (305), Expect = 1.426e-27 Identity = 61/103 (59.22%), Postives = 73/103 (70.87%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 500 +RS KAGL FPVGR+ R L++G Y+QR+G+GAP GNAARDNKK+RIIPRH+ LA+RND+EL KLL VTIA GGVLPNI+ LLPK Sbjct: 18 TRSAKAGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPK 120
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2A_CRYNE (Histone H2A OS=Cryptococcus neoformans GN=HTA1 PE=3 SV=3) HSP 1 Score: 120.939 bits (302), Expect = 3.176e-27 Identity = 63/102 (61.76%), Postives = 71/102 (69.61%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLP 497 SRS KAGLQFPVGRI R LKKG Y+QR+G+GAP GNAARDNKK+RI+PRH+ LAVRNDEEL KLL V I+ GGVLP+I LLP Sbjct: 17 SRSSKAGLQFPVGRIHRLLKKGNYAQRIGSGAPVYLAAVLEYLAAEILELAGNAARDNKKSRIVPRHLQLAVRNDEELNKLLGSVVISQGGVLPHIMAELLP 118
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2A_AGABI (Histone H2A OS=Agaricus bisporus PE=2 SV=3) HSP 1 Score: 120.939 bits (302), Expect = 3.176e-27 Identity = 62/102 (60.78%), Postives = 70/102 (68.63%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLP 497 SRS KAGLQFPVGR+ R LKKG Y+QRVG GAP GNAARDNKK RI+PRH+ LA+RNDEEL KLL V I+ GGV+P+I P LLP Sbjct: 22 SRSSKAGLQFPVGRVHRLLKKGNYAQRVGAGAPVYMAAVLEYLAAEILELAGNAARDNKKQRIVPRHLQLAIRNDEELHKLLGNVVISQGGVVPHIAPELLP 123
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2A_YARLI (Histone H2A OS=Yarrowia lipolytica GN=HTA1 PE=3 SV=3) HSP 1 Score: 120.168 bits (300), Expect = 5.418e-27 Identity = 61/103 (59.22%), Postives = 71/103 (68.93%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 500 SRS KA L FPVGR+ R L+KG Y+QR+G GAP GNAARDNKK+RI+PRH+ LA+RNDEEL KLL VTIA GGVLPNI+ LLP+ Sbjct: 20 SRSAKADLTFPVGRVHRLLRKGNYAQRIGAGAPIYLAAVLEYLAVEILELSGNAARDNKKSRIVPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPR 122
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2A_COCIM (Histone H2A OS=Coccidioides immitis GN=HTA1 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 7.076e-27 Identity = 63/103 (61.17%), Postives = 70/103 (67.96%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 500 SRS KAGL FPVGR+ R L+KG Y+QRVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL VTIA GGV+P I+ LLPK Sbjct: 18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVMPYIHQNLLPK 120
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2AY_RAT (Core histone macro-H2A.1 OS=Rattus norvegicus GN=H2afy PE=1 SV=4) HSP 1 Score: 117.472 bits (293), Expect = 3.512e-26 Identity = 61/103 (59.22%), Postives = 69/103 (66.99%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 500 SRS KAG+ FPVGR+ RY+KKG R+G GAP GNAARDNKK R+ PRH+LLAV NDEEL +LL GVTIA GGVLPNI+P LL K Sbjct: 14 SRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAK 116
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2AY_MOUSE (Core histone macro-H2A.1 OS=Mus musculus GN=H2afy PE=1 SV=3) HSP 1 Score: 117.472 bits (293), Expect = 3.512e-26 Identity = 61/103 (59.22%), Postives = 69/103 (66.99%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 500 SRS KAG+ FPVGR+ RY+KKG R+G GAP GNAARDNKK R+ PRH+LLAV NDEEL +LL GVTIA GGVLPNI+P LL K Sbjct: 14 SRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAK 116
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2AY_HUMAN (Core histone macro-H2A.1 OS=Homo sapiens GN=H2AFY PE=1 SV=4) HSP 1 Score: 117.472 bits (293), Expect = 3.512e-26 Identity = 61/103 (59.22%), Postives = 69/103 (66.99%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 500 SRS KAG+ FPVGR+ RY+KKG R+G GAP GNAARDNKK R+ PRH+LLAV NDEEL +LL GVTIA GGVLPNI+P LL K Sbjct: 14 SRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAK 116 The following BLAST results are available for this feature:
BLAST of CF504219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504219 ID=CF504219; Name=CF504219; organism=Citrus sinensis; type=EST; length=502bpback to top |