CF504219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2AZ_PHANO (Histone H2A.Z OS=Phaeosphaeria nodorum GN=HTZ1 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 8.115e-15 Identity = 50/104 (48.08%), Postives = 58/104 (55.77%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLKK-GRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 500 S S KAGLQFP GRI R+L+ R R+G A GNAA+D K RI PRH+ LA+R DEEL L+ TIA GGVLP+IN LL K Sbjct: 25 SHSAKAGLQFPCGRIKRHLRTITRQKTRIGAKASIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIR-ATIAFGGVLPHINRALLLK 127
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2AV_STRPU (Histone H2A.V (Fragment) OS=Strongylocentrotus purpuratus GN=H2A.F/Z PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.384e-14 Identity = 49/104 (47.12%), Postives = 60/104 (57.69%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLKKGRYSQ-RVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 500 SRS +AGLQFPVGRI R+LK S RVG A GNA++D K RI PRH+ LA+R DEEL L+ TIA GGV+P+I+ L+ K Sbjct: 16 SRSARAGLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGK 118
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2AV_DROME (Histone H2A.v OS=Drosophila melanogaster GN=His2Av PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 1.384e-14 Identity = 49/104 (47.12%), Postives = 60/104 (57.69%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLKKGRYSQ-RVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 500 SRS +AGLQFPVGRI R+LK S RVG A GNA++D K RI PRH+ LA+R DEEL L+ TIA GGV+P+I+ L+ K Sbjct: 19 SRSARAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGK 121
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2AV_CAEEL (Histone H2A.V OS=Caenorhabditis elegans GN=htz-1 PE=2 SV=3) HSP 1 Score: 78.9518 bits (193), Expect = 1.384e-14 Identity = 49/104 (47.12%), Postives = 61/104 (58.65%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLKKGRYSQ-RVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 500 SRS +AGLQFPVGRI R+LK+ S RVG A GNA++D K RI PRH+ LA+R DEEL L+ TIA GGV+P+I+ L+ K Sbjct: 21 SRSARAGLQFPVGRIHRFLKQRTTSSGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLHLAIRGDEELDTLIK-ATIAGGGVIPHIHRYLMNK 123
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2AZ_CRYNE (Histone H2A.Z OS=Cryptococcus neoformans GN=HTZ1 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.808e-14 Identity = 49/104 (47.12%), Postives = 61/104 (58.65%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLK-KGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 500 +RS KAGLQFPVGRI R+L+ K + R+G A GNAA+D + RI PRH+ LA+R DEEL LL TIA GGVLP+I+ L+ K Sbjct: 24 TRSSKAGLQFPVGRIHRFLRNKNANNVRIGAKAAVYVASIMEYLTAEVLELAGNAAKDLRVKRITPRHLQLAIRGDEEL-DLLIRATIAGGGVLPHIHKSLVAK 126
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2AV3_ORYSJ (Probable histone H2A variant 3 OS=Oryza sativa subsp. japonica GN=Os03g0743400 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.808e-14 Identity = 49/104 (47.12%), Postives = 61/104 (58.65%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLKKGRYSQ-RVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 500 SRS +AGLQFPVGRI R LK+ + RVG A GNA++D K RI PRH+ LA+R DEEL L+ G TIA GGV+P+I+ L+ K Sbjct: 31 SRSSRAGLQFPVGRIHRQLKQRTQANGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINK 133
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2AV2_ORYSJ (Probable histone H2A variant 2 OS=Oryza sativa subsp. japonica GN=Os10g0418000 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.808e-14 Identity = 51/105 (48.57%), Postives = 62/105 (59.05%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLKKGRYSQ--RVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 500 SRS +AG+QFPVGRI R LK GR S RVG A GNA++D K RI PRH+ LA+R DEEL L+ G TIA GGV+P+I+ L+ K Sbjct: 33 SRSSRAGIQFPVGRIHRQLK-GRVSANGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINK 135
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2AZ_SHEEP (Histone H2A.Z OS=Ovis aries GN=H2AFZ PE=2 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 2.361e-14 Identity = 49/104 (47.12%), Postives = 60/104 (57.69%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLKKGRYSQ-RVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 500 SRS +AGLQFPVGRI R+LK S RVG A GNA++D K RI PRH+ LA+R DEEL L+ TIA GGV+P+I+ L+ K Sbjct: 19 SRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGK 121
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2AZ_RAT (Histone H2A.Z OS=Rattus norvegicus GN=H2afz PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 2.361e-14 Identity = 49/104 (47.12%), Postives = 60/104 (57.69%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLKKGRYSQ-RVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 500 SRS +AGLQFPVGRI R+LK S RVG A GNA++D K RI PRH+ LA+R DEEL L+ TIA GGV+P+I+ L+ K Sbjct: 19 SRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGK 121
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2AZ_PONAB (Histone H2A.Z OS=Pongo abelii GN=H2AFZ PE=2 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 2.361e-14 Identity = 49/104 (47.12%), Postives = 60/104 (57.69%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLKKGRYSQ-RVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 500 SRS +AGLQFPVGRI R+LK S RVG A GNA++D K RI PRH+ LA+R DEEL L+ TIA GGV+P+I+ L+ K Sbjct: 19 SRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGK 121 The following BLAST results are available for this feature:
BLAST of CF504219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504219 ID=CF504219; Name=CF504219; organism=Citrus sinensis; type=EST; length=502bpback to top |