CF504225

Overview
NameCF504225
Unique NameCF504225
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length381
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.960e-15
Identity = 41/114 (35.96%), Postives = 72/114 (63.16%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEK--DLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKGLNIGLLC 378
            ARV+DFG+AK+++   +    +++AG+ GY+APEY  + R  EK+D+YSFGV++LE+++G+LP D  F EK  ++V W+   + +     ++D   +   +E +   L+I   C
Sbjct:  441 ARVSDFGLAKLLEDE-ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTDASFIEKGFNIVGWLNFLISENRAKEIVDLSCEGVERESLDALLSIATKC 553          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.866e-15
Identity = 37/113 (32.74%), Postives = 69/113 (61.06%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFK-EEICKGLNIGLLC 378
            A++ADFG+++     G+    +V+AG+ GY+ PEY  T R+ EKSD+YSFG+V+LE++T +  +D    +  + +WV   L +  +  ++DP L+  ++   + + L + + C
Sbjct:  718 AKLADFGLSRSFPIGGETHISTVVAGTPGYLDPEYYQTTRLGEKSDVYSFGIVLLEIITNQPVIDQSRSKSHISQWVGFELTRGDITKIMDPNLNGDYESRSVWRVLELAMSC 830          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y3288_ARATH (Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana GN=At3g02880 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.125e-14
Identity = 44/118 (37.29%), Postives = 70/118 (59.32%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEK--DLVKWVCSTLDQKGVDHVLDPKLDCC---FKEEICKGLNIGLLCT 381
            A+V+D+G+A ++ ++  P  +       GY APE     ++++K+D+YSFGV+ILEL+TG+ P   +  E+  DL +WV S  +Q+    VLDP+L        E I + L IG+ CT
Sbjct:  484 AKVSDYGLAPIISSTSAPNRID------GYRAPEITDARKISQKADVYSFGVLILELLTGKSPTHQQLNEEGVDLPRWVQSVTEQQTPSDVLDPELTRYQPEGNENIIRLLKIGMSCT 595          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.125e-14
Identity = 36/114 (31.58%), Postives = 67/114 (58.77%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMS-VIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCF-KEEICKGLNIGLLC 378
            A++ADFG+++     G    +S V+AG+ GY+ PEY  T  ++EKSD+YSFG+++LE++T +  +D      ++ +WV   + +     ++DPKL   +    + + L + + C
Sbjct:  705 AKIADFGLSRSFQVGGDQSQVSTVVAGTLGYLDPEYYLTSELSEKSDVYSFGILLLEIITNQRVIDQTRENPNIAEWVTFVIKKGDTSQIVDPKLHGNYDTHSVWRALEVAMSC 818          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 1.469e-14
Identity = 40/96 (41.67%), Postives = 64/96 (66.67%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPV-DPEFGEK-DLVKWVCSTLDQKGVDHVLDPKL 324
            A++ADFG++KV         ++ + G+ GY+ PEY  T ++NEKSD+YSFG+V+LEL+TG+  +   + GEK ++V +V   L    +D V+DP+L
Sbjct:  718 AKIADFGLSKVFPEDDLSHVVTAVMGTPGYVDPEYYNTFKLNEKSDVYSFGIVLLELITGKRSIMKTDDGEKMNVVHYVEPFLKMGDIDGVVDPRL 813          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: PEPR2_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.919e-14
Identity = 49/126 (38.89%), Postives = 73/126 (57.94%), Query Frame = 1
Query:   49 VADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEK-DLVKWVCSTL--------------DQKGVDHVLDPKLDCCFKEEICKGLNIGLLCT 381
            + DFG+A+++D S    S + + G+ GYIAPE AY    +++SD+YS+GVV+LELVTG+  +D  F E  ++V WV S L              D K VD +LD KL    +E+  +  ++ L CT
Sbjct:  937 IGDFGLARILDDS--TVSTATVTGTTGYIAPENAYKTVRSKESDVYSYGVVLLELVTGKRALDRSFPEDINIVSWVRSVLSSYEDEDDTAGPIVDPKLVDELLDTKL----REQAIQVTDLALRCT 1056          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.506e-14
Identity = 44/118 (37.29%), Postives = 75/118 (63.56%), Query Frame = 1
Query:   46 RVADFGVAKVVDASGKPKS---MSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRL----PVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKGLNIGLLC 378
            ++ADFG+AK+ D SG+  +    S IAG+ GY+APEYA   + + K+D++SFGV+++E++TG+       + +   +DL+ WV  +  +  +  V+DP L    + EI + ++IGLLC
Sbjct:  497 KIADFGLAKLFD-SGQTMTHRFTSRIAGTYGYMAPEYAMHGQFSVKTDVFSFGVLVIEIITGKRNNNGGSNGDEDAEDLLSWVWRSWREDTILSVIDPSLTAGSRNEILRCIHIGLLC 613          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.273e-14
Identity = 32/94 (34.04%), Postives = 62/94 (65.96%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKL 324
            A++ADFG+++     G+ +  + IAG+ GY+ PE  ++ R+ EKSD+YSFG+V+LE++T +  ++   G+  + +WV   +++  +  ++DP L
Sbjct:  703 AKLADFGLSRSFQGEGESQESTTIAGTLGYLDPECYHSGRLGEKSDVYSFGIVLLEMITNQPVINQTSGDSHITQWVGFQMNRGDILEIMDPNL 796          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.273e-14
Identity = 36/77 (46.75%), Postives = 54/77 (70.13%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVD-PEFGEKDLVKW 270
            ARV+DFG+A+++ A     S+S +AG+ GY+ PEY  + R   K D+YS GVV+LE+++G+ P D  EFG+ +LV W
Sbjct:  980 ARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSIGVVMLEILSGKRPTDKEEFGDTNLVGW 1056          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.273e-14
Identity = 47/116 (40.52%), Postives = 69/116 (59.48%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPE--FGEKDLVKWVCSTL-DQKGVDHVLDPKL-DCCFKEEICKGLNIGLLC 378
            A+++DFG+AK      K    + + G+ GY APEY  T  +  KSD+YSFGVV+LEL++GR  VD     GE++LV+W    L +++ +  V+D +L D    EE CK   + L C
Sbjct:  217 AKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRC 332          
The following BLAST results are available for this feature:
BLAST of CF504225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
FEI2_ARATH2.960e-1535.96LRR receptor-like serine/threonine-protein kinase ... [more]
PAM74_ARATH3.866e-1532.74Probable LRR receptor-like serine/threonine-protei... [more]
Y3288_ARATH1.125e-1437.29Probable inactive receptor kinase At3g02880 OS=Ara... [more]
MEE39_ARATH1.125e-1431.58Probable LRR receptor-like serine/threonine-protei... [more]
Y4291_ARATH1.469e-1441.67Probable LRR receptor-like serine/threonine-protei... [more]
PEPR2_ARATH1.919e-1438.89Leucine-rich repeat receptor-like protein kinase P... [more]
CRK29_ARATH2.506e-1437.29Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
RLK7_ARATH3.273e-1434.04Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
BRL2_ARATH3.273e-1446.75Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
APK1A_ARATH3.273e-1440.52Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-714 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-15_F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504225 ID=CF504225; Name=CF504225; organism=Citrus sinensis; type=EST; length=381bp
GAGAGAGAACTAGTCTCGAGTTTTTTTTTTTTTTTTTTTGGTGCACGAGT
GGCCGATTTTGGTGTAGCCAAGGTGGTTGATGCCTCTGGAAAGCCTAAAT
CAATGTCTGTCATTGCTGGTTCCTGTGGTTACATCGCCCCAGAATATGCC
TACACACTTCGTGTGAACGAGAAGAGCGACATATACAGTTTCGGAGTAGT
CATTCTTGAGTTAGTAACTGGAAGACTGCCAGTCGATCCGGAGTTTGGGG
AGAAGGATTTGGTCAAATGGGTCTGCTCTACTTTGGATCAGAAAGGAGTG
GACCATGTTCTTGATCCCAAACTCGATTGCTGTTTTAAGGAAGAAATATG
CAAGGGCCTCAACATTGGCCTACTCTGCACT
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