CF504233

Overview
NameCF504233
Unique NameCF504233
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length490
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504233 vs. ExPASy Swiss-Prot
Match: INO1_MESCR (Inositol-3-phosphate synthase OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 2.154e-33
Identity = 67/81 (82.72%), Postives = 73/81 (90.12%), Query Frame = 1
Query:  253 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRN--GTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTG 489
            MFIE+FKVESPNVKYT++EI SVY+Y+TTELVHENR   G YQWIVKPKTV+Y FKTD  VPKLGVMLVGWGGNNGSTLTG
Sbjct:    1 MFIESFKVESPNVKYTENEIESVYNYDTTELVHENRKDAGGYQWIVKPKTVQYHFKTDTRVPKLGVMLVGWGGNNGSTLTG 81          
BLAST of CF504233 vs. ExPASy Swiss-Prot
Match: INO1_SPIPO (Inositol-3-phosphate synthase OS=Spirodela polyrrhiza GN=TUR1 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.396e-32
Identity = 63/78 (80.77%), Postives = 70/78 (89.74%), Query Frame = 1
Query:  253 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLT 486
            MFIE F+VESPNVKY D EI SVY YETTELVHE RNG+YQW+VKPK+V+Y+FKTD  VP+LGVMLVGWGGNNGSTLT
Sbjct:    1 MFIEKFRVESPNVKYGDGEIESVYSYETTELVHEVRNGSYQWVVKPKSVQYQFKTDTRVPRLGVMLVGWGGNNGSTLT 78          
BLAST of CF504233 vs. ExPASy Swiss-Prot
Match: INO1_MAIZE (Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 3.330e-26
Identity = 53/78 (67.95%), Postives = 65/78 (83.33%), Query Frame = 1
Query:  253 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLT 486
            MFIE+F+VESP+V+Y   EI S Y Y+TTELVHE ++G  +W+V+PK+VKY F+T   VPKLGVMLVGWGGNNGSTLT
Sbjct:    1 MFIESFRVESPHVRYGPMEIESEYRYDTTELVHEGKDGASRWVVRPKSVKYNFRTRTAVPKLGVMLVGWGGNNGSTLT 78          
BLAST of CF504233 vs. ExPASy Swiss-Prot
Match: INO1_ORYSJ (Inositol-3-phosphate synthase OS=Oryza sativa subsp. japonica GN=INO1 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 5.681e-26
Identity = 53/78 (67.95%), Postives = 65/78 (83.33%), Query Frame = 1
Query:  253 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLT 486
            MFIE+F+VESP+V+Y   EI S Y Y+TTELVHE+ +G  +WIV+PK+V+Y F+T   VPKLGVMLVGWGGNNGSTLT
Sbjct:    1 MFIESFRVESPHVRYGAAEIESDYQYDTTELVHESHDGASRWIVRPKSVRYNFRTTTTVPKLGVMLVGWGGNNGSTLT 78          
BLAST of CF504233 vs. ExPASy Swiss-Prot
Match: INO1_HORVU (Inositol-3-phosphate synthase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.159e-25
Identity = 52/77 (67.53%), Postives = 63/77 (81.82%), Query Frame = 1
Query:  253 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTL 483
            MFIE+F+VESP V+Y   EI S Y Y+TTELVHE+ +G  +W+V+PK+V Y FKT+  VPKLGVMLVGWGGNNGSTL
Sbjct:    1 MFIESFRVESPKVRYGAGEIESEYRYDTTELVHESHDGASKWVVRPKSVNYHFKTNTTVPKLGVMLVGWGGNNGSTL 77          
BLAST of CF504233 vs. ExPASy Swiss-Prot
Match: INO1A_XENLA (Inositol-3-phosphate synthase 1-A OS=Xenopus laevis GN=isyna1-A PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.005e-14
Identity = 41/75 (54.67%), Postives = 54/75 (72.00%), Query Frame = 1
Query:  262 ENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLT 486
            E FKVESP+V+Y    I + Y+Y+TT+ V+E +  T    VKP + K+ F T+  VPKLGVMLVGWGGNNG+T+T
Sbjct:    3 EKFKVESPHVRYLKDVIEADYNYDTTQ-VYEEKGVTK---VKPCSTKFTFHTERKVPKLGVMLVGWGGNNGTTVT 73          
BLAST of CF504233 vs. ExPASy Swiss-Prot
Match: INO1_DICDI (Inositol-3-phosphate synthase OS=Dictyostelium discoideum GN=ino1 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.313e-14
Identity = 42/76 (55.26%), Postives = 55/76 (72.37%), Query Frame = 1
Query:  262 ENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTG 489
            E+FKV SPNVKYTD  I S Y Y+TT++  +N NG  + IV+P   KY FKT+  VP++GVM+VG  GNNG+T+ G
Sbjct:    7 ESFKVNSPNVKYTDEHIISDYTYQTTKV--QNVNG--ELIVEPVDQKYIFKTERKVPRMGVMIVGLCGNNGTTVVG 78          
BLAST of CF504233 vs. ExPASy Swiss-Prot
Match: INO1B_XENLA (Inositol-3-phosphate synthase 1-B OS=Xenopus laevis GN=isyna1-B PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 2.239e-14
Identity = 41/75 (54.67%), Postives = 53/75 (70.67%), Query Frame = 1
Query:  262 ENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLT 486
            E FKVESP+V+Y    I + Y Y+TT+ V+E +  T    VKP + K+ F T+  VPKLGVMLVGWGGNNG+T+T
Sbjct:    3 EMFKVESPHVRYLKDVIEADYSYDTTQ-VYEEKGVTK---VKPCSTKFTFHTERKVPKLGVMLVGWGGNNGTTVT 73          
BLAST of CF504233 vs. ExPASy Swiss-Prot
Match: INO1_DROME (Inositol-3-phosphate synthase OS=Drosophila melanogaster GN=Inos PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.605e-12
Identity = 38/72 (52.78%), Postives = 46/72 (63.89%), Query Frame = 1
Query:  271 KVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLT 486
            +V SP V+  D  I + YDY+T+   H  R    Q  V P+T   + +T  HVPKLGVMLVGWGGNNGSTLT
Sbjct:   10 EVISPKVQVDDEFITTDYDYQTS---HVKRTADGQLQVHPQTTSLKIRTGRHVPKLGVMLVGWGGNNGSTLT 78          
BLAST of CF504233 vs. ExPASy Swiss-Prot
Match: INO1_BOVIN (Inositol-3-phosphate synthase 1 OS=Bos taurus GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.737e-12
Identity = 37/73 (50.68%), Postives = 48/73 (65.75%), Query Frame = 1
Query:  268 FKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLT 486
            F VESP+V Y+   I + Y+Y TT +  E   G  +  V P + ++ F+T   VP+LGVMLVGWGGNNGSTLT
Sbjct:    7 FVVESPDVVYSPETIEAQYEYRTTSVSREG--GVLK--VHPTSTRFTFRTARQVPRLGVMLVGWGGNNGSTLT 75          
The following BLAST results are available for this feature:
BLAST of CF504233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
INO1_MESCR2.154e-3382.72Inositol-3-phosphate synthase OS=Mesembryanthemum ... [more]
INO1_SPIPO1.396e-3280.77Inositol-3-phosphate synthase OS=Spirodela polyrrh... [more]
INO1_MAIZE3.330e-2667.95Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=... [more]
INO1_ORYSJ5.681e-2667.95Inositol-3-phosphate synthase OS=Oryza sativa subs... [more]
INO1_HORVU2.159e-2567.53Inositol-3-phosphate synthase OS=Hordeum vulgare P... [more]
INO1A_XENLA1.005e-1454.67Inositol-3-phosphate synthase 1-A OS=Xenopus laevi... [more]
INO1_DICDI1.313e-1455.26Inositol-3-phosphate synthase OS=Dictyostelium dis... [more]
INO1B_XENLA2.239e-1454.67Inositol-3-phosphate synthase 1-B OS=Xenopus laevi... [more]
INO1_DROME1.605e-1252.78Inositol-3-phosphate synthase OS=Drosophila melano... [more]
INO1_BOVIN2.737e-1250.68Inositol-3-phosphate synthase 1 OS=Bos taurus GN=I... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-722 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-15_H09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504233 ID=CF504233; Name=CF504233; organism=Citrus sinensis; type=EST; length=490bp
CTAGTTTCGAAAGTTAAAAGAGTGTTGAGTCGAGTGGGAAGTGAGAATTG
AGAAGGAGAGTTGAGTTCGGAGACAGCAAGACGAAACAGCTCTTCTTCCA
ATAAATCTCAAAAGCATTTGTTTGGTTTTATTTAAAGCAATTTTCTCAGC
AAACTCTTCTTCTAATAAATTTTAAAGCATTTGTTTGGTTTTTATTTAAA
GCAATTTTCTCAGCGAAGTTTTCAATTTTTTCTCTAAAATTTTCCTGGGA
AAATGTTTATCGAAAATTTCAAGGTTGAGAGCCCAAATGTGAAGTACACA
GATCATGAGATTCACTCTGTGTACGATTATGAAACCACTGAGCTTGTTCA
TGAGAACAGAAATGGCACTTATCAGTGGATTGTCAAGCCCAAAACTGTCA
AATATGAGTTCAAAACCGATGTTCATGTCCCTAAACTTGGGGTTATGCTT
GTGGGTTGGGGTGGAAACAACGGCTCAACTCTCACGGGTG
back to top