CF504235

Overview
NameCF504235
Unique NameCF504235
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504235 vs. ExPASy Swiss-Prot
Match: YPK2_YEAST (Serine/threonine-protein kinase YPK2/YKR2 OS=Saccharomyces cerevisiae GN=YPK2 PE=1 SV=1)

HSP 1 Score: 48.9062 bits (115), Expect = 5.908e-11
Identity = 19/29 (65.52%), Postives = 23/29 (79.31%), Query Frame = 1
Query:  106 EYLAPEIIKGEGHGSAVDWWTFGIFLYEL 192
            EYLAPEI+ G+G+   VDWWT GI LYE+
Sbjct:  507 EYLAPEILLGQGYTKTVDWWTLGILLYEM 535          

HSP 2 Score: 31.187 bits (69), Expect = 5.908e-11
Identity = 21/61 (34.43%), Postives = 32/61 (52.46%), Query Frame = 2
Query:  170 LGSFYMSYLFGKTPFKGSENRATLYN-VVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRL 349
            LG      + G  P+   EN   +Y  ++ QPL FP+      +A+DL+ GLL ++P  RL
Sbjct:  528 LGILLYEMMTGLPPYY-DENVPVMYKKILQQPLLFPDG--FDPAAKDLLIGLLSRDPSRRL 585          

HSP 3 Score: 25.409 bits (54), Expect = 5.908e-11
Identity = 8/18 (44.44%), Postives = 13/18 (72.22%), Query Frame = 3
Query:  372 EIKQHPFFQGVNWALISL 425
            EI+ HPFF+ ++W  + L
Sbjct:  592 EIRNHPFFKDISWKKLLL 609          
BLAST of CF504235 vs. ExPASy Swiss-Prot
Match: AKT3_RAT (RAC-gamma serine/threonine-protein kinase OS=Rattus norvegicus GN=Akt3 PE=2 SV=2)

HSP 1 Score: 43.5134 bits (101), Expect = 6.014e-11
Identity = 15/29 (51.72%), Postives = 22/29 (75.86%), Query Frame = 1
Query:  106 EYLAPEIIKGEGHGSAVDWWTFGIFLYEL 192
            EYLAPE+++   +G AVDWW  G+ +YE+
Sbjct:  311 EYLAPEVLEDNDYGRAVDWWGLGVVMYEM 339          

HSP 2 Score: 35.4242 bits (80), Expect = 6.014e-11
Identity = 17/60 (28.33%), Postives = 32/60 (53.33%), Query Frame = 2
Query:  170 LGSFYMSYLFGKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRL 349
            LG      + G+ PF   ++      ++ + ++FP +  +S  A+ L+ GLL+K+P  RL
Sbjct:  332 LGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRT--LSSDAKSLLSGLLIKDPNKRL 389          

HSP 3 Score: 26.5646 bits (57), Expect = 6.014e-11
Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 3
Query:  360 EEQPEIKQHPFFQGVNW 410
            ++  EI +H FF GVNW
Sbjct:  394 DDPKEIMRHSFFSGVNW 410          
BLAST of CF504235 vs. ExPASy Swiss-Prot
Match: AKT3_MOUSE (RAC-gamma serine/threonine-protein kinase OS=Mus musculus GN=Akt3 PE=2 SV=1)

HSP 1 Score: 43.5134 bits (101), Expect = 6.014e-11
Identity = 15/29 (51.72%), Postives = 22/29 (75.86%), Query Frame = 1
Query:  106 EYLAPEIIKGEGHGSAVDWWTFGIFLYEL 192
            EYLAPE+++   +G AVDWW  G+ +YE+
Sbjct:  311 EYLAPEVLEDNDYGRAVDWWGLGVVMYEM 339          

HSP 2 Score: 35.4242 bits (80), Expect = 6.014e-11
Identity = 17/60 (28.33%), Postives = 32/60 (53.33%), Query Frame = 2
Query:  170 LGSFYMSYLFGKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRL 349
            LG      + G+ PF   ++      ++ + ++FP +  +S  A+ L+ GLL+K+P  RL
Sbjct:  332 LGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRT--LSSDAKSLLSGLLIKDPNKRL 389          

HSP 3 Score: 26.5646 bits (57), Expect = 6.014e-11
Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 3
Query:  360 EEQPEIKQHPFFQGVNW 410
            ++  EI +H FF GVNW
Sbjct:  394 DDAKEIMRHSFFSGVNW 410          
BLAST of CF504235 vs. ExPASy Swiss-Prot
Match: AKT3_HUMAN (RAC-gamma serine/threonine-protein kinase OS=Homo sapiens GN=AKT3 PE=1 SV=1)

HSP 1 Score: 43.5134 bits (101), Expect = 6.014e-11
Identity = 15/29 (51.72%), Postives = 22/29 (75.86%), Query Frame = 1
Query:  106 EYLAPEIIKGEGHGSAVDWWTFGIFLYEL 192
            EYLAPE+++   +G AVDWW  G+ +YE+
Sbjct:  311 EYLAPEVLEDNDYGRAVDWWGLGVVMYEM 339          

HSP 2 Score: 35.4242 bits (80), Expect = 6.014e-11
Identity = 17/60 (28.33%), Postives = 32/60 (53.33%), Query Frame = 2
Query:  170 LGSFYMSYLFGKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRL 349
            LG      + G+ PF   ++      ++ + ++FP +  +S  A+ L+ GLL+K+P  RL
Sbjct:  332 LGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRT--LSSDAKSLLSGLLIKDPNKRL 389          

HSP 3 Score: 26.5646 bits (57), Expect = 6.014e-11
Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 3
Query:  360 EEQPEIKQHPFFQGVNW 410
            ++  EI +H FF GVNW
Sbjct:  394 DDAKEIMRHSFFSGVNW 410          
BLAST of CF504235 vs. ExPASy Swiss-Prot
Match: KS6A5_CHICK (Ribosomal protein S6 kinase alpha-5 OS=Gallus gallus GN=RPS6KA5 PE=2 SV=1)

HSP 1 Score: 44.669 bits (104), Expect = 7.571e-11
Identity = 17/31 (54.84%), Postives = 24/31 (77.42%), Query Frame = 1
Query:  106 EYLAPEIIKG--EGHGSAVDWWTFGIFLYEL 192
            EY+AP+I++G   GH  AVDWW+ G+ +YEL
Sbjct:  208 EYMAPDIVRGGDTGHDKAVDWWSVGVLMYEL 238          

HSP 2 Score: 32.3426 bits (72), Expect = 7.571e-11
Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = 3
Query:  351 PADEEQPEIKQHPFFQGVNW 410
            P D +  EIKQHPFFQ +NW
Sbjct:  296 PTDAD--EIKQHPFFQNINW 313          

HSP 3 Score: 28.1054 bits (61), Expect = 7.571e-11
Identity = 19/67 (28.36%), Postives = 33/67 (49.25%), Query Frame = 2
Query:  170 LGSFYMSYLFGKTPF-----KGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLAC 355
            +G      L G +PF     K S+   +   +  +P   P    +S  ++D+I+ LL+K+P+ RL C
Sbjct:  231 VGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP---PYPQEMSALSKDIIQRLLMKDPKKRLGC 294          
The following BLAST results are available for this feature:
BLAST of CF504235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
YPK2_YEAST5.908e-1165.52Serine/threonine-protein kinase YPK2/YKR2 OS=Sacch... [more]
AKT3_RAT6.014e-1151.72RAC-gamma serine/threonine-protein kinase OS=Rattu... [more]
AKT3_MOUSE6.014e-1151.72RAC-gamma serine/threonine-protein kinase OS=Mus m... [more]
AKT3_HUMAN6.014e-1151.72RAC-gamma serine/threonine-protein kinase OS=Homo ... [more]
KS6A5_CHICK7.571e-1154.84Ribosomal protein S6 kinase alpha-5 OS=Gallus gall... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-724 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-16_A01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504235 ID=CF504235; Name=CF504235; organism=Citrus sinensis; type=EST; length=540bp
AAGCACAGAAGCCTAAGAATGAAATGGGGAACCAAGTGAGCCCATTGCCA
GAACTTATTGCTGAGCCAACCAATGCCCGCTCCATGTCTTTTGTGGGAAC
ACACTGAGTACCTGGCACCGGAAATCATCAAAGGTGAAGGGCATGGCAGT
GCTGTTGATTGGTGGACTTTTGGGATCTTTCTATATGAGCTACCTGTTCG
GTAAAACTCCTTTTAAAGGATCTGAGAATAGGGCCACCTTGTATAATGTT
GTGGGGCAACCGTTGCGATTTCCAGAGTCACCTGTTGTTAGTTTTTCAGC
AAGGGATTTGATAAAGGGCTTACTAGTGAAAGAGCCCCAGAATAGATTAG
CCTGCAGACGAGGAGCAACCCGAGATCAAGCAACATCCCTTCTTTCAAGG
TGTAAATTGGGCATTGATTTCGTTGTGCAAGCCCGCCAGAGATCCCGAAA
CCAGTTGAGATTGTCCATAGTCCAGCCCCAGCATTATCAACTAAGGCAAA
AGCTGTTGCTGCTGGTAATGCTGATCATAATAATTATTTG
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