CF504264
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504264 vs. ExPASy Swiss-Prot
Match: RL5_EIMTE (60S ribosomal protein L5 OS=Eimeria tenella GN=RPL5 PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 5.149e-50 Identity = 96/156 (61.54%), Postives = 124/156 (79.49%), Query Frame = 3 Query: 9 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEP-ADTRRPFRALLDVGLIKTTTG 473 MAFVKA K+KAYFKRFQVKY+RRREGKTDY AR RLI QDKNKYN PKYRFVVR TN ++ Q++ A + GD ++ +A + EL RYG++VGLTNY+AAY TGLLLARR+LK + DE++G + +GE+Y +E ++ RRPF+ +LDVG++ TT G Sbjct: 1 MAFVKAIKNKAYFKRFQVKYRRRREGKTDYAARRRLILQDKNKYNAPKYRFVVRVTNSRVLCQVMYATLQGDRLVCSADSQELTRYGIKVGLTNYSAAYATGLLLARRLLKQKGLADEFKGLEKPSGEEYHIEEVSEERRPFKCVLDVGIVATTVG 156
BLAST of CF504264 vs. ExPASy Swiss-Prot
Match: RL5_OIKDI (60S ribosomal protein L5 OS=Oikopleura dioica GN=RPL5 PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 1.268e-48 Identity = 96/154 (62.34%), Postives = 114/154 (74.03%), Query Frame = 3 Query: 15 FVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGED-YSVEPADTRRPFRALLDVGLIKTTTG 473 FV K+KAYFKR+Q K+KRRREGKTDY AR RL QDKNKYNTPKYR VVR TNKDIIAQI A + GD ++ +AYAHELPRYG+ VGLTNY+AAY TGLL+ RRVL+ +D YEG +E G++ Y A + FR LD GL +T+TG Sbjct: 13 FVAVLKNKAYFKRYQPKFKRRREGKTDYFARKRLCVQDKNKYNTPKYRLVVRVTNKDIIAQIAYARLQGDVIVTSAYAHELPRYGVSVGLTNYSAAYATGLLIGRRVLQKFGLDSMYEGQIEVDGDEFYEEADAAEKASFRCYLDTGLARTSTG 166
BLAST of CF504264 vs. ExPASy Swiss-Prot
Match: RL5_YEAST (60S ribosomal protein L5 OS=Saccharomyces cerevisiae GN=RPL5 PE=1 SV=3) HSP 1 Score: 189.889 bits (481), Expect = 4.820e-48 Identity = 99/157 (63.06%), Postives = 116/157 (73.89%), Query Frame = 3 Query: 9 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPA--DTRRPFRALLDVGLIKTTTG 473 MAF K KS AY RFQ ++RRREGKTDY R RL+ Q K KYNTPKYR VVRFTNKDII QI+S+ I GD VLAAAY+HELPRYG+ GLTN+AAAY TGLL+ARR L+ L +D+ Y+G E GE Y + A D RPF+ LD+GL +TTTG Sbjct: 1 MAFQKDAKSSAYSSRFQTPFRRRREGKTDYYQRKRLVTQHKAKYNTPKYRLVVRFTNKDIICQIISSTITGDVVLAAAYSHELPRYGITHGLTNWAAAYATGLLIARRTLQRLGLDETYKGVEEVEGE-YELTEAVEDGPRPFKVFLDIGLQRTTTG 156
BLAST of CF504264 vs. ExPASy Swiss-Prot
Match: RL5_PIG (60S ribosomal protein L5 (Fragment) OS=Sus scrofa GN=RPL5 PE=2 SV=3) HSP 1 Score: 179.489 bits (454), Expect = 6.514e-45 Identity = 87/124 (70.16%), Postives = 100/124 (80.65%), Query Frame = 3 Query: 9 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVE 380 M FVK K+KAYFKR+QVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DII QI A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+L M Y G VE Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMXKIYGGQVE 124
BLAST of CF504264 vs. ExPASy Swiss-Prot
Match: RL5B_SCHPO (60S ribosomal protein L5-B OS=Schizosaccharomyces pombe GN=rpl5b PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 1.229e-43 Identity = 91/156 (58.33%), Postives = 111/156 (71.15%), Query Frame = 3 Query: 9 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEP-ADTRRPFRALLDVGLIKTTTG 473 M F+KA KS YF R+Q KY+RRREGKTDY AR RLI Q KNKYN PKYR VVRF+N+ + QIVS+ + GD VLA A++ ELPRYG++ GL N+ AAY TGLL+ARR L + + D+YEG E GE E D RPF+ LDVGL +T+TG Sbjct: 1 MPFIKAVKSSPYFSRYQTKYRRRREGKTDYYARKRLIAQAKNKYNAPKYRLVVRFSNRFVTCQIVSSRVNGDYVLAHAHSSELPRYGIKWGLANWTAAYATGLLVARRALAKVGLADKYEGVTEPEGEFELTEAIEDGPRPFKVFLDVGLKRTSTG 156
BLAST of CF504264 vs. ExPASy Swiss-Prot
Match: RL5A_SCHPO (60S ribosomal protein L5-A OS=Schizosaccharomyces pombe GN=rpl5a PE=1 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 1.229e-43 Identity = 91/156 (58.33%), Postives = 111/156 (71.15%), Query Frame = 3 Query: 9 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEP-ADTRRPFRALLDVGLIKTTTG 473 M F+KA KS YF R+Q KY+RRREGKTDY AR RLI Q KNKYN PKYR VVRF+N+ + QIVS+ + GD VLA A++ ELPRYG++ GL N+ AAY TGLL+ARR L + + D+YEG E GE E D RPF+ LDVGL +T+TG Sbjct: 1 MPFIKAVKSSPYFSRYQTKYRRRREGKTDYYARKRLIAQAKNKYNAPKYRLVVRFSNRFVTCQIVSSRVNGDYVLAHAHSSELPRYGIKWGLANWTAAYATGLLVARRALAKVGLADKYEGVTEPEGEFELTEAIEDGPRPFKVFLDVGLKRTSTG 156
BLAST of CF504264 vs. ExPASy Swiss-Prot
Match: RL18_METTH (50S ribosomal protein L18P OS=Methanobacterium thermoautotrophicum GN=rpl18p PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.414e-15 Identity = 43/101 (42.57%), Postives = 63/101 (62.38%), Query Frame = 3 Query: 39 AYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLK 341 A+ R+++ ++RRREGKTDYRAR +++ T K R VVR T +IAQI++ + GD L +A++ +L + G G +N AAAY TG L +R LK Sbjct: 2 AHGPRYKLAFRRRREGKTDYRARYKMVE-------TGKSRLVVRITTYHVIAQIINVGMNGDETLVSAHSKQLQKMGWLGGTSNTAAAYLTGYLCGKRALK 95
BLAST of CF504264 vs. ExPASy Swiss-Prot
Match: RL18_METHJ (50S ribosomal protein L18P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl18p PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.379e-15 Identity = 46/97 (47.42%), Postives = 61/97 (62.89%), Query Frame = 3 Query: 51 RFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLK 341 R+ V ++RRREG+T+Y AR RL+ K R VVR TN+ II QI++A++ GD AA + EL ++G E L N AAY TG+LLA R LK Sbjct: 6 RYFVAFRRRREGRTNYHARTRLVVATKP-------RMVVRKTNRHIICQIITAHMEGDRTHVAANSSELRKFGYEGSLNNTPAAYLTGMLLAVRALK 95
BLAST of CF504264 vs. ExPASy Swiss-Prot
Match: RL5_RABIT (60S ribosomal protein L5 (Fragments) OS=Oryctolagus cuniculus GN=RPL5 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 4.553e-14 Identity = 35/47 (74.47%), Postives = 41/47 (87.23%), Query Frame = 3 Query: 15 FVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKY 155 FVK K+KAYFKR+QVK++RRREGKTDY AR RL+ QDKNKYNTP + Sbjct: 2 FVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPAH 48
BLAST of CF504264 vs. ExPASy Swiss-Prot
Match: RL18_KORCO (50S ribosomal protein L18P OS=Korarchaeum cryptofilum (strain OPF8) GN=rpl18p PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 7.767e-14 Identity = 44/97 (45.36%), Postives = 56/97 (57.73%), Query Frame = 3 Query: 51 RFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLK 341 R++VK++RRREGKTDY R+ L+ K R VVR TN+ II Q + GD V+A A++ EL +YG G N AAY TG L A R K Sbjct: 6 RYKVKFRRRREGKTDYMKRLALLKSRKP-------RVVVRRTNRYIIVQFIGFKGEGDEVIAYAFSKELEKYGWPYGGKNLPAAYLTGYLAAMRAKK 95 The following BLAST results are available for this feature:
BLAST of CF504264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504264 ID=CF504264; Name=CF504264; organism=Citrus sinensis; type=EST; length=475bpback to top |