CF504267
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ODPAT_RAT (Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial OS=Rattus norvegicus GN=Pdha2 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 1.882e-51 Identity = 91/148 (61.49%), Postives = 118/148 (79.73%), Query Frame = 1 Query: 13 FYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTYRTRDEI 453 FYGG+GIVGAQ+PLG G+A A KY K+ + ALYGDGAANQGQ+FEA N++ALW LP + +CENN YGMGTA R+A S Y+K+G +PGL+V+GMD L+V++A KFA +H GP+++E+ TYRYHGHSMSDPG +YRTR+E+ Sbjct: 161 FYGGNGIVGAQVPLGAGVALACKYLKNGQICLALYGDGAANQGQVFEAYNMSALWKLPCVFICENNRYGMGTAIERSAASTDYHKKGFVIPGLRVNGMDILSVREATKFAADHCRSGKGPIVMELQTYRYHGHSMSDPGISYRTREEV 308
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ODPAT_MOUSE (Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial OS=Mus musculus GN=Pdha2 PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 2.457e-51 Identity = 91/148 (61.49%), Postives = 118/148 (79.73%), Query Frame = 1 Query: 13 FYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTYRTRDEI 453 FYGG+GIVGAQ+PLG G+AFA KY K+ V ALYGDGAANQGQ+FEA N++ALW LP + +CENN YGMGT+ R+A S Y+K+G +PGL+V+GMD L V++A KFA +H GP+++E+ TYRYHGHSMSDPG +YR+R+E+ Sbjct: 161 FYGGNGIVGAQVPLGAGVAFACKYLKNGQVCLALYGDGAANQGQVFEAYNMSALWKLPCVFICENNLYGMGTSNERSAASTDYHKKGFIIPGLRVNGMDILCVREATKFAADHCRSGKGPIVMELQTYRYHGHSMSDPGISYRSREEV 308
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ODPT_ASCSU (Pyruvate dehydrogenase E1 component subunit alpha type II, mitochondrial (Fragment) OS=Ascaris suum PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 9.338e-51 Identity = 93/148 (62.84%), Postives = 115/148 (77.70%), Query Frame = 1 Query: 13 FYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHA-LKNGPMILEMDTYRYHGHSMSDPGSTYRTRDEI 453 FYGG+GIVGAQ PLG G+AFA KY K + V L+GDGA NQGQL+E++N+A LW+LP + VCENN YGMGT+ R++ S YY RGDYVPG VDGMD LAV+QA ++ KE GP+++EM TYRY GHSMSDPG++YRTR+EI Sbjct: 151 FYGGNGIVGAQQPLGTGIAFAMKYKKQKNVCITLFGDGATNQGQLYESMNMAKLWELPVLYVCENNGYGMGTSAARSSASTDYYTRGDYVPGFWVDGMDVLAVRQAIRWGKEWCNAGKGPLMIEMATYRYGGHSMSDPGTSYRTREEI 298
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ODPA_RHIME (Pyruvate dehydrogenase E1 component subunit alpha OS=Rhizobium meliloti GN=pdhA PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 6.067e-42 Identity = 86/154 (55.84%), Postives = 109/154 (70.78%), Query Frame = 1 Query: 1 KDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDY--VPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTYRTRDEI 453 K+ FYGGHGIVGAQ+ LG GLAFA +Y ++ V+ A +GDGAANQGQ++E+ N+AALW LP I + ENN Y MGT+ RA+ + +RG +PG +VDGMD AVK A A EH GP+ILEM TYRY GHSMSDP + YR++DE+ Sbjct: 133 KEKHFYGGHGIVGAQVSLGTGLAFANRYRGNDNVSLAYFGDGAANQGQVYESFNMAALWKLPVIYIVENNRYAMGTSVSRASAQTDFSQRGASFGIPGYQVDGMDVRAVKAAADEAVEHCRSGKGPIILEMLTYRYRGHSMSDP-AKYRSKDEV 285
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ODPA_RICFE (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia felis GN=pdhA PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 4.069e-38 Identity = 76/150 (50.67%), Postives = 103/150 (68.67%), Query Frame = 1 Query: 13 FYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDY--VPGLKVDGMDALAVKQACKFAKEHALKNG-PMILEMDTYRYHGHSMSDPGSTYRTRDEI 453 FYGGHGIVGAQ+P+G GLAFA+KY+ + F GDGA NQGQ++EA N+AALW LP + + ENN Y MGT+ R+ YK+G+ + G ++DGMD + K A E+ +N P+ILE+ TYRY GHSMSDP + YR+++E+ Sbjct: 116 FYGGHGIVGAQVPIGTGLAFAEKYNGTNNICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEYSMGTSVARSTFMRDLYKKGESFGIKGFQLDGMDFEEMYNGAKQAAEYVRENSFPLILEVKTYRYRGHSMSDP-AKYRSKEEV 264
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ODPA_ZYMMO (Pyruvate dehydrogenase E1 component subunit alpha OS=Zymomonas mobilis GN=pdhA PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 6.941e-38 Identity = 83/151 (54.97%), Postives = 104/151 (68.87%), Query Frame = 1 Query: 13 FYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGD--YVPGLKVDGMDALAVKQACKFAKEHA-LKNGPMILEMDTYRYHGHSMSDPGSTYRTRDEIS 456 F+GG+GIVGAQ+PLG GLAFA KY D + A +GDG+ANQGQ++EA N+AALW LP I V ENN Y MGT+ RA + +RG +P L VDGMD L V+ A A + GP+ILEM TYRY GHSMSDP + YR+R+E++ Sbjct: 141 FFGGNGIVGAQVPLGAGLAFAHKYRNDGGCSAAYFGDGSANQGQVYEAYNMAALWKLPVIFVIENNGYAMGTSIQRANAHTALSERGAGFGIPALVVDGMDVLEVRGAATVAVDWVQAGKGPIILEMKTYRYRGHSMSDP-ARYRSREEVN 290
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ODPA_RICBR (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia bellii (strain RML369-C) GN=pdhA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 1.184e-37 Identity = 76/153 (49.67%), Postives = 107/153 (69.93%), Query Frame = 1 Query: 13 FYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDY--VPGLKVDGMDAL----AVKQACKFAKEHALKNGPMILEMDTYRYHGHSMSDPGSTYRTRDEI 453 FYGGHGIVGAQ+P+G GLAFA+KY+ + F GDGA NQGQ++EA N+AALW LP + + ENN Y MGT+ R+ YK+G+ + G +++GMD VKQA ++ +E+++ P+ILE+ TYRY GHSMSDP + YR+++E+ Sbjct: 116 FYGGHGIVGAQVPIGTGLAFAEKYNGTNNICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEYSMGTSVARSTFMRDLYKKGESFGIKGFQLNGMDFEEMYDGVKQAAEYVRENSM---PLILEVKTYRYRGHSMSDP-AKYRSKEEV 264
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ODPA_RICCN (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia conorii GN=pdhA PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 3.445e-37 Identity = 75/150 (50.00%), Postives = 101/150 (67.33%), Query Frame = 1 Query: 13 FYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDY--VPGLKVDGMDALAVKQACKFAKEHALKNG-PMILEMDTYRYHGHSMSDPGSTYRTRDEI 453 FYGGHGIVGAQ+P+G GLAF +KY+ + F GDGA NQGQ++EA N+AALW LP + + ENN Y MGT+ R+ YK+G + G ++DGMD + K A E+ +N P+ILE+ TYRY GHSMSDP + YR+++E+ Sbjct: 116 FYGGHGIVGAQVPIGTGLAFVEKYNDTHNICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEYSMGTSVARSTFMRDLYKKGASFGIKGFQLDGMDFEEMYDGSKQAAEYVRENSFPLILEVKTYRYRGHSMSDP-AKYRSKEEV 264
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ODPA_RICTY (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia typhi GN=pdhA PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 4.499e-37 Identity = 74/151 (49.01%), Postives = 103/151 (68.21%), Query Frame = 1 Query: 13 FYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDY--VPGLKVDGMDALAVKQACKFAKEHALKNG-PMILEMDTYRYHGHSMSDPGSTYRTRDEIS 456 FYGGHGIVGAQ+P+G GLAFA+KY+ + F GDGA NQGQ++EA N+A+LW LP + + ENN Y MGT+ R+ YK+G+ + G ++DGMD + K E+ +N P+ILE+ TYRY GHSMSDP + YR+++E++ Sbjct: 116 FYGGHGIVGAQVPIGTGLAFAEKYNGTNNICFTFLGDGAVNQGQVYEAFNMASLWGLPVVYIIENNEYSMGTSVSRSTFMRDLYKKGESFGIRGFQLDGMDFEEMYNGTKQVAEYVRENSFPVILEVKTYRYRGHSMSDP-AKYRSKEEVA 265
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ODPA_RICPR (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia prowazekii GN=pdhA PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.002e-36 Identity = 74/150 (49.33%), Postives = 102/150 (68.00%), Query Frame = 1 Query: 13 FYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDY--VPGLKVDGMDALAVKQACKFAKEHALKNG-PMILEMDTYRYHGHSMSDPGSTYRTRDEI 453 FYGGHGIVGAQ+P+G GLAFA+KY+ + F GDGA NQGQ++EA N+A+LW LP + + ENN Y MGT+ R+ YK+G+ + G ++DGMD + K E+ +N P+ILE+ TYRY GHSMSDP + YR+++E+ Sbjct: 116 FYGGHGIVGAQVPIGTGLAFAEKYNGTNNICFTFLGDGAVNQGQVYEAFNMASLWGLPIVYIIENNEYSMGTSVARSTFMCDLYKKGESFGIRGFQLDGMDFEEMYNGTKQVAEYVRENSFPVILEVKTYRYRGHSMSDP-AKYRSKEEV 264 The following BLAST results are available for this feature:
BLAST of CF504267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504267 ID=CF504267; Name=CF504267; organism=Citrus sinensis; type=EST; length=456bpback to top |