CF504267
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ODPA_PORYE (Pyruvate dehydrogenase E1 component subunit alpha OS=Porphyra yezoensis GN=pdhA PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.451e-27 Identity = 66/156 (42.31%), Postives = 92/156 (58.97%), Query Frame = 1 Query: 13 FYGGHGIVGAQIPLGCGLAFAQKY-------SKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDY--VPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTYRTRDE 450 F GG + IP+ G AF Y ++D VT +GDG N GQ FE LN+A LW LP I V ENN + +G A R++ P +K+ + +PG++VDGMD LAV+QA K A + A + +GP ++E TYR+ GHS++DP R+R E Sbjct: 127 FLGGFAFIAEGIPVATGAAFQSIYRQQVLKETEDLRVTACFFGDGTTNNGQFFECLNMAVLWKLPIIFVVENNQWAIGMAHHRSSSIPEIHKKAEAFGLPGIEVDGMDVLAVRQAAKQAVQRARQGDGPTLIEALTYRFRGHSLADP-DELRSRQE 281
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ACOA_BACSU (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha OS=Bacillus subtilis GN=acoA PE=2 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 1.604e-26 Identity = 67/152 (44.08%), Postives = 85/152 (55.92%), Query Frame = 1 Query: 4 DSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGD--YVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTYRTRDE 450 D G G +GIVG L CG A KY + + V+ +GDGA NQG E LN+AA+W+LP + V ENN YG T A+ S R +PG+ VDG D LAV QA + A E A GP ++E TYR +GH D TY+T+DE Sbjct: 114 DKGMLGANGIVGGGFTLACGSALTAKYKQTKNVSVCFFGDGANNQGTFHEGLNLAAVWNLPVVFVAENNGYGEATPFEYASACDSIADRAAAYNMPGVTVDGKDILAVYQAAEEAIERARNGGGPSLIECMTYRNYGHFEGD-AQTYKTKDE 264
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ODPA_PORPU (Pyruvate dehydrogenase E1 component subunit alpha OS=Porphyra purpurea GN=pdhA PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 3.573e-26 Identity = 64/156 (41.03%), Postives = 89/156 (57.05%), Query Frame = 1 Query: 13 FYGGHGIVGAQIPLGCGLAFAQKYSK-------DETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDY--VPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTYRTRDE 450 F GG + IP+ G AF Y + + VT +GDG N GQ FE LN+A LW LP I V ENN + +G A R++ P +K+ + +PG++VDGMD LAV+Q + A E A + GP ++E TYR+ GHS++DP R+R E Sbjct: 125 FLGGFAFIAEGIPVATGAAFQSIYRQQVLKEPGELRVTACFFGDGTTNNGQFFECLNMAVLWKLPIIFVVENNQWAIGMAHHRSSSIPEIHKKAEAFGLPGIEVDGMDVLAVRQVAEKAVERARQGQGPTLIEALTYRFRGHSLADP-DELRSRQE 279
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ACOA_RALEH (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=acoA PE=1 SV=3) HSP 1 Score: 103.99 bits (258), Expect = 3.130e-22 Identity = 62/151 (41.06%), Postives = 79/151 (52.32%), Query Frame = 1 Query: 10 GFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTYRTRDEI 453 G G +GI+GA PL CG A A K+ V GDGA+NQG E+LN+AA+W+LP I V ENN Y T+ SY R G +PG+ VDG D AV +A A + GP +LE R++GH D TYR E+ Sbjct: 119 GMMGANGILGAGAPLICGAALAAKFRGKGEVGITFCGDGASNQGTFLESLNLAAVWNLPVIFVIENNGYAESTSRDYGTAVDSYVDRAAGFGIPGVTVDGTDFFAVHEAAGEVIRRAREGGGPSLLECKMVRFYGHFEGD-AQTYRAAGEL 268
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ODPA_STAAW (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus aureus (strain MW2) GN=pdhA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 5.340e-22 Identity = 60/144 (41.67%), Postives = 86/144 (59.72%), Query Frame = 1 Query: 31 IVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGT--AEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMS-DPGSTYRTRDE 450 I+GAQ G+AFA K V GDG ++QG +E +N AA + PAI V +NN+Y + T ++ AA++ + +PG++VDGMDALAV QA K A++ A+ GP ++E TYRY H+M+ D + YRT DE Sbjct: 145 IIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAGDDPTRYRTSDE 288
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ODPA_STAAS (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus aureus (strain MSSA476) GN=pdhA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 5.340e-22 Identity = 60/144 (41.67%), Postives = 86/144 (59.72%), Query Frame = 1 Query: 31 IVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGT--AEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMS-DPGSTYRTRDE 450 I+GAQ G+AFA K V GDG ++QG +E +N AA + PAI V +NN+Y + T ++ AA++ + +PG++VDGMDALAV QA K A++ A+ GP ++E TYRY H+M+ D + YRT DE Sbjct: 145 IIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAGDDPTRYRTSDE 288
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ODPA_STAAN (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus aureus (strain N315) GN=pdhA PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 5.340e-22 Identity = 60/144 (41.67%), Postives = 86/144 (59.72%), Query Frame = 1 Query: 31 IVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGT--AEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMS-DPGSTYRTRDE 450 I+GAQ G+AFA K V GDG ++QG +E +N AA + PAI V +NN+Y + T ++ AA++ + +PG++VDGMDALAV QA K A++ A+ GP ++E TYRY H+M+ D + YRT DE Sbjct: 145 IIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAGDDPTRYRTSDE 288
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ODPA_STAAM (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pdhA PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 5.340e-22 Identity = 60/144 (41.67%), Postives = 86/144 (59.72%), Query Frame = 1 Query: 31 IVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGT--AEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMS-DPGSTYRTRDE 450 I+GAQ G+AFA K V GDG ++QG +E +N AA + PAI V +NN+Y + T ++ AA++ + +PG++VDGMDALAV QA K A++ A+ GP ++E TYRY H+M+ D + YRT DE Sbjct: 145 IIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAGDDPTRYRTSDE 288
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ODPA_STAAC (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus aureus (strain COL) GN=pdhA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 5.340e-22 Identity = 60/144 (41.67%), Postives = 86/144 (59.72%), Query Frame = 1 Query: 31 IVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGT--AEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMS-DPGSTYRTRDE 450 I+GAQ G+AFA K V GDG ++QG +E +N AA + PAI V +NN+Y + T ++ AA++ + +PG++VDGMDALAV QA K A++ A+ GP ++E TYRY H+M+ D + YRT DE Sbjct: 145 IIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAGDDPTRYRTSDE 288
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ODPA_STAAR (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus aureus (strain MRSA252) GN=pdhA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 9.108e-22 Identity = 60/144 (41.67%), Postives = 86/144 (59.72%), Query Frame = 1 Query: 31 IVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGT--AEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMS-DPGSTYRTRDE 450 I+GAQ G+AFA K V GDG ++QG +E +N AA + PAI V +NN+Y + T ++ AA++ + +PG++VDGMDALAV QA K A++ A+ GP ++E TYRY H+M+ D + YRT DE Sbjct: 145 IIGAQYIQTAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAGDDPTRYRTSDE 288 The following BLAST results are available for this feature:
BLAST of CF504267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504267 ID=CF504267; Name=CF504267; organism=Citrus sinensis; type=EST; length=456bpback to top |