CF504270

Overview
NameCF504270
Unique NameCF504270
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length506
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504270 vs. ExPASy Swiss-Prot
Match: NAC67_ORYSJ (NAC domain-containing protein 67 OS=Oryza sativa subsp. japonica GN=NAC67 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.866e-22
Identity = 63/168 (37.50%), Postives = 83/168 (49.40%), Query Frame = 1
Query:   25 LPPGYRFFPTEEELVSFYLINK----------LEEL---------CGEKCQGDTEQWFFFTPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEGASNPSRAVIPKLR-HEFSLCRIYVKSESFRAFDRRPLE 468
            LPPG+RF PT+EELV+ YL  +          + EL            +      +W+FFTPR         P+R  ASGYWKATG+   V   + R  G+KK +VFY GK P G KT+W MHEYR  +     + A    LR  ++ LCR+Y K   +     R  E
Sbjct:   17 LPPGFRFHPTDEELVAHYLCPRAAGRAAPVPIIAELDLYRHDPWDLPHRALFGRREWYFFTPRDRKYPNGSRPNRAAASGYWKATGADKPVL-HNGRTAGIKKALVFYHGKPPRGVKTEWIMHEYRLAKKGGAAAAAGAGALRLDDWVLCRLYNKKNEWEKMQSRKEE 183          
BLAST of CF504270 vs. ExPASy Swiss-Prot
Match: NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.866e-22
Identity = 57/156 (36.54%), Postives = 89/156 (57.05%), Query Frame = 1
Query:   25 LPPGYRFFPTEEELVSFYLINKLEEL---CG----------------EKCQGDTEQWFFFTPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSDNR-VIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEGASNPSRAVIPKLRHEFSLCRIYVKS 432
            +PPG+RF PT+EEL+++YL+ K+ +    C                 EK +   ++W+FFT R          +R T +GYWKATG    + SS  + ++G+KKT+VFYKG+AP G K+ W MHEYR ++G  +    +    + E+ LC++ +KS
Sbjct:   20 MPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPEKAKMGEKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGEKSCWVMHEYR-LDGKFS-YHYISSSAKDEWVLCKVCLKS 173          
BLAST of CF504270 vs. ExPASy Swiss-Prot
Match: NAC2_ARATH (NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 4.157e-22
Identity = 60/156 (38.46%), Postives = 79/156 (50.64%), Query Frame = 1
Query:   22 ELPPGYRFFPTEEELVSFYLINKLE--------------------ELCGEKCQGDTEQWFFFTPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEGASNPSRAVIPKLRHEFSLCRIYVK 429
            +LPPG+RF PT+EELV  YL  K                      EL G    G+ E W+FF+PR         P+R+  SGYWKATG+   +     + +G+KK +VFY GKAP G KT W MHEYR  +   +  +        ++ LCRIY K
Sbjct:    6 QLPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYGEKE-WYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPIGLP--KPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNK 158          
BLAST of CF504270 vs. ExPASy Swiss-Prot
Match: NAC43_ARATH (NAC domain-containing protein 43 OS=Arabidopsis thaliana GN=NAC043 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 7.090e-22
Identity = 57/143 (39.86%), Postives = 81/143 (56.64%), Query Frame = 1
Query:   22 ELPPGYRFFPTEEELVSFYL------------------INKLEEL-CGEKCQ-GDTEQ--WFFFTPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEGASNPSRAVI 384
            ++PPG+RF PTEEEL+ +YL                  +NKLE     E C+ G T Q  W+FF+ +          +R TA+G+WKATG    +YS+  R IG++KT+VFYKG+AP G+K+ W MHEYR  +   +P    +
Sbjct:   15 QVPPGFRFHPTEEELLQYYLRKKVNSIEIDLDVIRDVDLNKLEPWDIQEMCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSNGRR-IGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNIISPEDVTV 156          
BLAST of CF504270 vs. ExPASy Swiss-Prot
Match: NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.580e-21
Identity = 53/131 (40.46%), Postives = 76/131 (58.02%), Query Frame = 1
Query:   25 LPPGYRFFPTEEELVSFYLINKLEELCGE----------KCQG---------DTEQWFFFTPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSDN-RVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEG 357
            LPPG+RF PT+EEL++ YL+ K+ + C            KC+            ++W+FF+ R          +R T +GYWKATG    ++SS    ++G+KKT+VFYKG+AP G K+ W MHEYR +EG
Sbjct:   17 LPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKSNWVMHEYR-LEG 146          
BLAST of CF504270 vs. ExPASy Swiss-Prot
Match: NAC22_ARATH (NAC domain-containing protein 21/22 OS=Arabidopsis thaliana GN=NAC021 PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 3.519e-21
Identity = 54/158 (34.18%), Postives = 88/158 (55.70%), Query Frame = 1
Query:   22 ELPPGYRFFPTEEELVSFYL-------------------INKLE--ELCGEKCQGDTEQWFFFTPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEGASNPSRAVIPKLRHEFSLCRIYVKS 432
            +LPPG+RF P ++ELV  YL                   +NK E  ++    C G  + W+F++ R          +R TA+GYWKATG    +     +++G++KT+VFY+G+AP GRKT W MHE+R ++G+ +P    +   + ++ LCR++ K+
Sbjct:   18 KLPPGFRFHPKDDELVCDYLMRRSLHNNHRPPLVLIQVDLNKCEPWDIPKMACVGGKD-WYFYSQRDRKYATGLRTNRATATGYWKATGKDRTILRK-GKLVGMRKTLVFYQGRAPRGRKTDWVMHEFR-LQGSHHPPNHSLSSPKEDWVLCRVFHKN 172          
BLAST of CF504270 vs. ExPASy Swiss-Prot
Match: NAC48_ORYSJ (NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.337e-20
Identity = 60/161 (37.27%), Postives = 77/161 (47.83%), Query Frame = 1
Query:   22 ELPPGYRFFPTEEELVSFYLINKLE-------------------------ELCGEKCQGDTEQWFFFTPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEGASNPSRAVIPKLRHEFSLCRIYVK 429
            +LPPG+RF PT+EELV  YL  +                            L GEK      +W+FF+PR         P+R   SGYWKATG+   V S   + + +KK +VFY GKAP G KT W MHEYR +      +R        ++ LCRIY K
Sbjct:    8 QLPPGFRFHPTDEELVMHYLCRRCAGLPIAVPIIAEIDLYKFDPWQLPRMALYGEK------EWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGSP--KPVAIKKALVFYAGKAPKGEKTNWIMHEYR-LADVDRSARKKNSLRLDDWVLCRIYNK 159          
BLAST of CF504270 vs. ExPASy Swiss-Prot
Match: NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.337e-20
Identity = 59/167 (35.33%), Postives = 81/167 (48.50%), Query Frame = 1
Query:   25 LPPGYRFFPTEEELVSFYLINKLEEL-------------------CGEKCQGDTEQWFFFTPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSD---NRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEGA-------SNPSRAVIPKLRHEFSLCRIYVKSES 438
            LPPG+RF PT+EELV  YL  K + +                      K     ++W+FF+PR         P+R   SGYWKATG+   V S+    ++ +GVKK +VFY GK P G K+ W MHEYR  +          N   ++      ++ LCRIY K+ S
Sbjct:   17 LPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSL---RLDDWVLCRIYKKNNS 180          
BLAST of CF504270 vs. ExPASy Swiss-Prot
Match: NA102_ARATH (NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 3.891e-20
Identity = 61/170 (35.88%), Postives = 80/170 (47.06%), Query Frame = 1
Query:    4 KYKTMEELPPGYRFFPTEEELVSFYLINKLE--------------------ELCGEKCQGDTEQWFFFTPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEGASNPSRAVIPKLR-HEFSLCRIYVKSESFRAF 450
            K K    LP G+RF PT+EELV FYL  +                      EL      G+ E W+FF+ R         P+R   +GYWKATG+   +     + +G+KK +VFY GKAP G KT W MHEYR      + S      LR  ++ LCRIY K  +   +
Sbjct:   43 KMKAELNLPAGFRFHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMALYGEKE-WYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPI--GKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRSASTNKKNNLRLDDWVLCRIYNKKGTMEKY 209          
BLAST of CF504270 vs. ExPASy Swiss-Prot
Match: NAC66_ARATH (NAC domain-containing protein 66 OS=Arabidopsis thaliana GN=NAC066 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.081e-20
Identity = 54/133 (40.60%), Postives = 77/133 (57.89%), Query Frame = 1
Query:   22 ELPPGYRFFPTEEELVSFYL------------------INKLEEL-CGEKCQ-GDTEQ--WFFFTPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIE 354
            ++PPG+RF PTEEEL+ +YL                  +NKLE     E C+ G T Q  W+F++ +          +R T  G+WKATG    +Y++ +R IG++KT+VFYKG+AP G+K+ W MHEYR  E
Sbjct:   10 QVPPGFRFHPTEEELLKYYLRKKISNIKIDLDVIPDIDLNKLEPWDIQEMCKIGTTPQNDWYFYSHKDKKYPTGTRTNRATTVGFWKATGRDKTIYTNGDR-IGMRKTLVFYKGRAPHGQKSDWIMHEYRLDE 141          
The following BLAST results are available for this feature:
BLAST of CF504270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
NAC67_ORYSJ1.866e-2237.50NAC domain-containing protein 67 OS=Oryza sativa s... [more]
NAC54_ARATH1.866e-2236.54Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thal... [more]
NAC2_ARATH4.157e-2238.46NAC domain-containing protein 2 OS=Arabidopsis tha... [more]
NAC43_ARATH7.090e-2239.86NAC domain-containing protein 43 OS=Arabidopsis th... [more]
NAC98_ARATH1.580e-2140.46Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thal... [more]
NAC22_ARATH3.519e-2134.18NAC domain-containing protein 21/22 OS=Arabidopsis... [more]
NAC48_ORYSJ1.337e-2037.27NAC domain-containing protein 48 OS=Oryza sativa s... [more]
NAC18_ARATH1.337e-2035.33NAC domain-containing protein 18 OS=Arabidopsis th... [more]
NA102_ARATH3.891e-2035.88NAC domain-containing protein 102 OS=Arabidopsis t... [more]
NAC66_ARATH5.081e-2040.60NAC domain-containing protein 66 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-759 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-16_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504270 ID=CF504270; Name=CF504270; organism=Citrus sinensis; type=EST; length=506bp
CTAAAATACAAGACAATGGAGGAACTCCCACCTGGTTATCGTTTCTTTCC
AACAGAAGAGGAGTTGGTTTCCTTCTATTTAATCAACAAGCTTGAAGAGC
TATGCGGAGAGAAATGTCAAGGAGACACCGAGCAATGGTTTTTCTTCACG
CCGAGACAAGAGAGGGAAGAACGGGGCGGGAGACCGAGCAGAACCACTGC
TTCTGGGTATTGGAAGGCCACAGGCTCACCGAGCTATGTATATTCATCCG
ATAACCGGGTGATCGGGGTAAAGAAGACGATGGTTTTCTATAAGGGTAAG
GCTCCGACTGGGAGAAAAACCAAATGGAAGATGCATGAGTATAGAGCCAT
TGAAGGAGCATCCAATCCATCCAGAGCTGTCATTCCTAAGTTGAGGCATG
AATTCAGCCTGTGCCGAATCTATGTGAAATCCGAAAGCTTTCGAGCATTT
GATAGACGCCCGCTGGAAGCAGCACCGAGAGAGGAACAACCTCATGGTGG
TGGGGC
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