CF504308
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504308 vs. ExPASy Swiss-Prot
Match: UBA1_SCHPO (Ubiquitin-activating enzyme E1 1 OS=Schizosaccharomyces pombe GN=ptr3 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 5.773e-27 Identity = 59/127 (46.46%), Postives = 82/127 (64.57%), Query Frame = 3 Query: 3 ALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVXXXXXXLINPHLNTE--ALQIRANPETENVFNDTFWEXXXXXXXXXXXXXXRLYIDQRCLYFQKPLLESGTLG 377 A+GCE LKN A+MGV+ G G +++TD D IEKSNL+RQFLFR ++G+ KS ++NP L + + Q R PE+E +F D F+E R+Y+D+RC++F+KPLLESGTLG Sbjct: 437 AIGCEMLKNWAMMGVATGESGHISVTDMDSIEKSNLNRQFLFRPRDVGKLKSECASTAVSIMNPSLTGKITSYQERVGPESEGIFGDEFFEKLSLVTNALDNVEARMYVDRRCVFFEKPLLESGTLG 563
BLAST of CF504308 vs. ExPASy Swiss-Prot
Match: UBA1_DICDI (Ubiquitin-like modifier-activating enzyme 1 OS=Dictyostelium discoideum GN=uba1 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 7.540e-27 Identity = 58/125 (46.40%), Postives = 79/125 (63.20%), Query Frame = 3 Query: 3 ALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVXXXXXXLINPHLNTEALQIRANPETENVFNDTFWEXXXXXXXXXXXXXXRLYIDQRCLYFQKPLLESGTLG 377 A+GCE LKN A+MG+ G +G + +TD D IEKSNL+RQFLFR +I Q KS ++NP LN +A +R P+TE+ +N+ F+ RLY+D +C+Y+ KPLLESGTLG Sbjct: 438 AIGCEMLKNFAMMGLGAGPKGLVHVTDMDTIEKSNLNRQFLFRSSDIQQLKSQTAANAVRVMNPDLNVKAYSLRVGPDTESHYNEEFFNSLDGVCNALDNVEARLYMDSQCVYYGKPLLESGTLG 562
BLAST of CF504308 vs. ExPASy Swiss-Prot
Match: UBA6_MOUSE (Ubiquitin-like modifier-activating enzyme 6 OS=Mus musculus GN=Uba6 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.278e-22 Identity = 55/126 (43.65%), Postives = 75/126 (59.52%), Query Frame = 3 Query: 3 ALGCEFLKNLALMGVSCGNQ-GKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVXXXXXXLINPHLNTEALQIRANPETENVFNDTFWEXXXXXXXXXXXXXXRLYIDQRCLYFQKPLLESGTLG 377 A+GCE LKN AL+GV G + G +T+TD D+IEKSNL+RQFLFR +I + KS INP L +A + P TE++++D F+ R Y+D RCL +PLL+SGT+G Sbjct: 470 AIGCEMLKNFALLGVGTGREKGMVTVTDPDLIEKSNLNRQFLFRPHHIQKPKSYTAAEATLKINPQLKIDAHLNKVCPATESIYSDEFYTKQDIIITALDNVEARRYVDSRCLANLRPLLDSGTMG 595
BLAST of CF504308 vs. ExPASy Swiss-Prot
Match: UBA7_HUMAN (Ubiquitin-like modifier-activating enzyme 7 OS=Homo sapiens GN=UBA7 PE=1 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 1.246e-21 Identity = 52/125 (41.60%), Postives = 71/125 (56.80%), Query Frame = 3 Query: 3 ALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVXXXXXXLINPHLNTEALQIRANPETENVFNDTFWEXXXXXXXXXXXXXXRLYIDQRCLYFQKPLLESGTLG 377 A+GCE LK AL+G+ GN G LT+ D D IE+SNLSRQFLFR ++G+ K+ V +NP L L +P TE+++ D F+ R Y+ RC ++ KPLLE+GT G Sbjct: 442 AIGCELLKVFALVGLGAGNSGGLTVVDMDHIERSNLSRQFLFRSQDVGRPKAEVAAAAARGLNPDLQVIPLTYPLDPTTEHIYGDNFFSRVDGVAAALDSFQARRYVAARCTHYLKPLLEAGTSG 566
BLAST of CF504308 vs. ExPASy Swiss-Prot
Match: UBA6_HUMAN (Ubiquitin-like modifier-activating enzyme 6 OS=Homo sapiens GN=UBA6 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.182e-21 Identity = 53/126 (42.06%), Postives = 72/126 (57.14%), Query Frame = 3 Query: 3 ALGCEFLKNLALMGVSCGNQ-GKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVXXXXXXLINPHLNTEALQIRANPETENVFNDTFWEXXXXXXXXXXXXXXRLYIDQRCLYFQKPLLESGTLG 377 A+GCE LKN AL+GV + G +T+TD D+IEKSNL+RQFLFR +I + KS IN + +A + P TE ++ND F+ R Y+D RCL +PLL+SGT+G Sbjct: 470 AIGCEMLKNFALLGVGTSKEKGMITVTDPDLIEKSNLNRQFLFRPHHIQKPKSYTAADATLKINSQIKIDAHLNKVCPTTETIYNDEFYTKQDVIITALDNVEARRYVDSRCLANLRPLLDSGTMG 595
BLAST of CF504308 vs. ExPASy Swiss-Prot
Match: UBA2_SCHPO (Ubiquitin-activating enzyme E1-like OS=Schizosaccharomyces pombe GN=uba2 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.400e-11 Identity = 42/124 (33.87%), Postives = 62/124 (50.00%), Query Frame = 3 Query: 6 LGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVXXXXXXLINPHLNTEALQIRANPETENVFNDTFWEXXXXXXXXXXXXXXRLYIDQRCLYFQKPLLESGTLG 377 +GCE LKNL + GV ++ I D D I+ SNL+RQFLFR ++ Q K+ V NP++ EA E+ FN ++ R +++++CL PL+ESGT G Sbjct: 36 IGCELLKNLLMSGVK-----EVHIIDLDTIDLSNLNRQFLFRKKHVKQPKAIVAAKTASSFNPNVKLEAYHANIK---EDRFNVAWFRQFDLVFNALDNLDARRHVNKQCLLASVPLIESGTTG 151 The following BLAST results are available for this feature:
BLAST of CF504308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504308 ID=CF504308; Name=CF504308; organism=Citrus sinensis; type=EST; length=380bpback to top |