CF504318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_FRAP2 (Lipoyl synthase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=lipA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.169e-20 Identity = 44/91 (48.35%), Postives = 58/91 (63.74%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 ATIM++G CTR C+FC+V T N AE++ L+YVV+TSVDRDDL D G+GH+A T+ +K L N+ +EAL PDF G Sbjct: 89 ATIMLMGAVCTRACKFCSVDTGNPKGWLDKEEPQNTAESVKLMNLEYVVLTSVDRDDLVDGGAGHYAATITAIKNLDENIKVEALTPDFAG 179
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_POLNA (Lipoyl synthase OS=Polaromonas naphthalenivorans (strain CJ2) GN=lipA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.751e-20 Identity = 49/91 (53.85%), Postives = 59/91 (64.84%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT MI+GD CTR C FC+V R N+A IA+ L YVVITSVDRDDL D GSGHF + +++++EL P IE LVPDFRG Sbjct: 91 ATFMIMGDKCTRRCPFCDVGHGRPDPLDADEPL-NLARTIAALKLKYVVITSVDRDDLRDGGSGHFVECIQRIRELSPGTTIEVLVPDFRG 180
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_SORC5 (Lipoyl synthase OS=Sorangium cellulosum (strain So ce56) GN=lipA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.817e-20 Identity = 48/91 (52.75%), Postives = 60/91 (65.93%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT+M+LGD CTRGCRFC V T +VA AIA L YVV+T V+RDDL D G+ H A+TV +L L+P++LIE LV DF+G Sbjct: 54 ATVMLLGDVCTRGCRFCAVTTGDPRGAVDVREPEHVARAIARLSLQYVVMTMVNRDDLLDGGAEHVARTVSRLHALRPDLLIETLVGDFQG 144
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_BACFR (Lipoyl synthase OS=Bacteroides fragilis GN=lipA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.817e-20 Identity = 47/91 (51.65%), Postives = 59/91 (64.84%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT MI GD CTR C+FCN +T R +VAE+IA L + VITSVDRDDL D G+ H+AQT+R++K L P E L+PDF+G Sbjct: 56 ATFMIAGDICTRSCKFCNTQTGRPLPLDPDEP-AHVAESIALMKLSHAVITSVDRDDLPDLGAAHWAQTIREIKRLNPETTTEVLIPDFQG 145
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_RHOP2 (Lipoyl synthase OS=Rhodopseudomonas palustris (strain HaA2) GN=lipA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.151e-19 Identity = 49/89 (55.06%), Postives = 57/89 (64.04%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDF 267 AT MI+GDTCTR C FCNVKT VAEA GL+++VITSVDRDDLAD G+ HFA T+R ++E P IE L PDF Sbjct: 78 ATFMIMGDTCTRACAFCNVKTGMPGALDPNEP-AYVAEATRKLGLEHLVITSVDRDDLADGGAAHFAATIRAVREACPTTTIEILTPDF 165
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_METSB (Lipoyl synthase OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=lipA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.151e-19 Identity = 47/89 (52.81%), Postives = 57/89 (64.04%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDF 267 AT MI+GDTCTR C FCNVKT VA+A+A GL +VVITSVDRDDL+D G+ HFA+ + ++ L P IE L PDF Sbjct: 78 ATFMIMGDTCTRACAFCNVKTG-LPRALDRNEPQRVADAVAKLGLSHVVITSVDRDDLSDGGARHFAEVIAAIRSLSPKTTIEVLTPDF 165
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_AZOC5 (Lipoyl synthase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=lipA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.151e-19 Identity = 47/89 (52.81%), Postives = 57/89 (64.04%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDF 267 AT MI+GDTCTR C FCNV+T V EA+A GL +VVITSVDRDDL D G+ HFA+T+ +++L P IE L PDF Sbjct: 74 ATFMIMGDTCTRACSFCNVRTGMPKALDLDEPQ-KVGEAVAKLGLSHVVITSVDRDDLTDGGAEHFARTIASIRKLSPGTTIEILTPDF 161
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_RICBR (Lipoyl synthase OS=Rickettsia bellii (strain RML369-C) GN=lipA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.504e-19 Identity = 47/89 (52.81%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDF 267 AT+MILG CTR CRFCNVKT R +AEA+ GL +VVITSVDRDDL D G+ HFA+ + ++++ PN IE L PDF Sbjct: 103 ATVMILGSVCTRACRFCNVKTGRPDLLDPHEPQ-RLAEAVQKLGLKHVVITSVDRDDLEDGGATHFAECISEIRKSSPNTTIEILTPDF 190
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_RICB8 (Lipoyl synthase OS=Rickettsia bellii (strain OSU 85-389) GN=lipA PE=3 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 1.504e-19 Identity = 47/89 (52.81%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDF 267 AT+MILG CTR CRFCNVKT R +AEA+ GL +VVITSVDRDDL D G+ HFA+ + ++++ PN IE L PDF Sbjct: 51 ATVMILGSVCTRACRFCNVKTGRPDLLDPHEPQ-RLAEAVQKLGLKHVVITSVDRDDLEDGGATHFAECISEIRKSSPNTTIEILTPDF 138
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_HALHL (Lipoyl synthase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=lipA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.504e-19 Identity = 46/91 (50.55%), Postives = 57/91 (62.64%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT M+LG CTR CRFC+V T + AE++ GL YVV+TSVDRDDL D G+ H+AQ VR +K P+ +EAL PDFRG Sbjct: 88 ATFMVLGSVCTRTCRFCSVDTGNPKGRLDPQEPEHCAESVRLMGLRYVVLTSVDRDDLPDGGAEHYAQCVRAIKADNPDTAVEALTPDFRG 178 The following BLAST results are available for this feature:
BLAST of CF504318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504318 ID=CF504318; Name=CF504318; organism=Citrus sinensis; type=EST; length=275bpback to top |