CF504318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_LEPBJ (Lipoyl synthase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=lipA PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.457e-14 Identity = 41/90 (45.56%), Postives = 57/90 (63.33%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFR 270 AT M+ GD CTR C +C+V + + VAE+ + GL +VVIT+V+RDDL D G+ HFA+TV ++E P+ IE LVPDF+ Sbjct: 71 ATYMLGGDICTRRCSYCDVASGKPSALDRDEPK-RVAESAIALGLKHVVITAVNRDDLEDGGAAHFAETVEVVREGLPDCKIELLVPDFK 159
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_KOCRD (Lipoyl synthase OS=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) GN=lipA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.902e-14 Identity = 39/91 (42.86%), Postives = 55/91 (60.44%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT +I GDTCTR C FC++ T + VAE++ GL Y +TSV RDDLAD G+ A+T+R + + P+ +E L+PDF+G Sbjct: 72 ATFLIGGDTCTRRCDFCDIATGKPGMVDVAEPR-KVAESVRDLGLRYATVTSVARDDLADGGAWLNAETIRAIHAMNPSTGVEILIPDFKG 161
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_GEOBB (Lipoyl synthase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=lipA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.902e-14 Identity = 40/91 (43.96%), Postives = 55/91 (60.44%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT +ILG CTR C FC+V + +VAEA+ GL +VVITS RDDL D G+ +A+TV +++ + P +E L+PDFRG Sbjct: 52 ATFLILGRICTRLCSFCSV-SKETPLPLEPGEAASVAEAVKRLGLSHVVITSPTRDDLPDGGASVYAETVARIRSVSPATKVELLIPDFRG 141
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_CORJK (Lipoyl synthase OS=Corynebacterium jeikeium (strain K411) GN=lipA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.902e-14 Identity = 40/89 (44.94%), Postives = 52/89 (58.43%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDF 267 AT +I GDTC+R C FC +K+ R VAE + GL Y IT V RDDL D+G+ +A+ V+K+ EL PN +E L PDF Sbjct: 72 ATFLIGGDTCSRRCDFCQIKSGRPSPLDMDEPR-RVAENVREMGLRYATITGVTRDDLDDEGAWLYAEVVKKIHELNPNTGVENLTPDF 159
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_CORA7 (Lipoyl synthase OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=lipA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.902e-14 Identity = 41/91 (45.05%), Postives = 52/91 (57.14%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT +I GD CTR C FC++ T + VAE I L+Y IT V RDDL D+G+ +A+ VRK+ EL PN +E L PDF G Sbjct: 72 ATFLIGGDKCTRRCDFCDIATGKPAELDRDEPR-RVAENIQEMDLNYTTITGVTRDDLPDEGAWLYAEVVRKIHELNPNTGVENLTPDFSG 161
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_ACIC1 (Lipoyl synthase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=lipA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.902e-14 Identity = 39/91 (42.86%), Postives = 52/91 (57.14%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT +I GDTC+R C FC + + R VAE++A GL Y +T V RDDL D+G+ +AQTVR++ P +E L PDF G Sbjct: 73 ATFLIGGDTCSRNCSFCQISSGRPQPLDRDEPR-RVAESVARMGLRYATVTGVTRDDLDDEGAWLYAQTVREIHHAVPGCGVELLTPDFHG 162
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_STACT (Lipoyl synthase OS=Staphylococcus carnosus (strain TM300) GN=lipA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.485e-14 Identity = 44/91 (48.35%), Postives = 52/91 (57.14%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT MILG CTR CRFC VKT VAE++ L +VVIT+V RDDL D GS +A+TVRK++E P IE L D G Sbjct: 59 ATFMILGAVCTRACRFCAVKTG-LPNELDLGEPERVAESVELMNLKHVVITAVARDDLRDAGSNVYAETVRKVRERNPYTTIEILPSDMGG 148
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_MYCTU (Lipoyl synthase OS=Mycobacterium tuberculosis GN=lipA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.485e-14 Identity = 39/91 (42.86%), Postives = 53/91 (58.24%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT +I GD CTR C FC + T + VA+++ + GL Y +T V RDDL D G+ +A TVR +KEL P+ +E L+PDF G Sbjct: 72 ATFLIGGDQCTRRCDFCQIDTGKPAELDRDEPR-RVADSVRTMGLRYATVTGVARDDLPDGGAWLYAATVRAIKELNPSTGVELLIPDFNG 161
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_MYCTA (Lipoyl synthase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=lipA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.485e-14 Identity = 39/91 (42.86%), Postives = 53/91 (58.24%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT +I GD CTR C FC + T + VA+++ + GL Y +T V RDDL D G+ +A TVR +KEL P+ +E L+PDF G Sbjct: 72 ATFLIGGDQCTRRCDFCQIDTGKPAELDRDEPR-RVADSVRTMGLRYATVTGVARDDLPDGGAWLYAATVRAIKELNPSTGVELLIPDFNG 161
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_MYCBT (Lipoyl synthase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=lipA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.485e-14 Identity = 39/91 (42.86%), Postives = 53/91 (58.24%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT +I GD CTR C FC + T + VA+++ + GL Y +T V RDDL D G+ +A TVR +KEL P+ +E L+PDF G Sbjct: 72 ATFLIGGDQCTRRCDFCQIDTGKPAELDRDEPR-RVADSVRTMGLRYATVTGVARDDLPDGGAWLYAATVRAIKELNPSTGVELLIPDFNG 161 The following BLAST results are available for this feature:
BLAST of CF504318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504318 ID=CF504318; Name=CF504318; organism=Citrus sinensis; type=EST; length=275bpback to top |