CF504318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_BUCAI (Lipoyl synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=lipA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.588e-13 Identity = 42/91 (46.15%), Postives = 52/91 (57.14%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT MILG CTR C FC V R +++ I G++YVVITSV RDDL D G+ HF ++ +K K + IE LVPDFRG Sbjct: 82 ATFMILGSICTRNCPFCAVFHGRPNPVNVEEPQ-KLSDTIFDMGINYVVITSVVRDDLYDGGAEHFVNCIKAIKN-KNQVKIEILVPDFRG 170
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_BUCA5 (Lipoyl synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=lipA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.588e-13 Identity = 42/91 (46.15%), Postives = 52/91 (57.14%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT MILG CTR C FC V R +++ I G++YVVITSV RDDL D G+ HF ++ +K K + IE LVPDFRG Sbjct: 82 ATFMILGSICTRNCPFCAVFHGRPNPVNVEEPQ-KLSDTIFDMGINYVVITSVVRDDLYDGGAEHFVNCIKAIKN-KNQVKIEILVPDFRG 170
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_LEPIN (Lipoyl synthase OS=Leptospira interrogans GN=lipA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.686e-13 Identity = 37/90 (41.11%), Postives = 57/90 (63.33%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFR 270 AT M+ GD CTR C +C+V + + +AE+ + L +VVITSV+RDDL D G+ HFA+TV+++++ P+ IE L+PD + Sbjct: 70 ATYMLGGDICTRRCSYCDVASGKPFPLDPEEPK-RIAESSIALDLRHVVITSVNRDDLEDGGAAHFAKTVKEIRKGLPDCKIELLIPDLK 158
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_BACSU (Lipoyl synthase OS=Bacillus subtilis GN=lipA PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 4.686e-13 Identity = 41/91 (45.05%), Postives = 50/91 (54.95%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT MILG CTR CRFC VKT VA+++A L + VIT+V RDD D G+G FA+TVR ++ P IE L D G Sbjct: 58 ATFMILGSVCTRACRFCAVKTG-LPTELDLQEPERVADSVALMNLKHAVITAVARDDQKDGGAGIFAETVRAIRRKSPFTTIEVLPSDMGG 147
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_BACP2 (Lipoyl synthase OS=Bacillus pumilus (strain SAFR-032) GN=lipA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.686e-13 Identity = 41/91 (45.05%), Postives = 50/91 (54.95%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT MILG CTR CRFC VKT VA+++A L + VIT+V RDD D G+G FA+TVR ++ P IE L D G Sbjct: 58 ATFMILGSVCTRACRFCAVKTG-LPTELDLQEPERVADSVALMNLKHAVITAVARDDQKDGGAGVFAETVRAIRRKSPFTTIEVLPSDMGG 147
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_BACA2 (Lipoyl synthase OS=Bacillus amyloliquefaciens (strain FZB42) GN=lipA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.686e-13 Identity = 41/91 (45.05%), Postives = 50/91 (54.95%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT MILG CTR CRFC VKT VA+++A L + VIT+V RDD D G+G FA+TVR ++ P IE L D G Sbjct: 58 ATFMILGSVCTRACRFCAVKTG-LPTELDLQEPERVADSVALMNLKHAVITAVARDDQKDGGAGVFAETVRAIRRKSPFTTIEVLPSDMGG 147
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_LEIXX (Lipoyl synthase OS=Leifsonia xyli subsp. xyli GN=lipA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.120e-13 Identity = 37/91 (40.66%), Postives = 51/91 (56.04%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT +I G CTR C FC + T + VAE++A GL Y +T V RDDL D+G+ +A+T+R++ P +E LVPDF G Sbjct: 72 ATFLIGGSQCTRRCDFCQIDTGKPAEFDRDEPR-RVAESVARMGLRYSTVTGVARDDLEDEGAWLYAETIREIHRQSPGTGVEILVPDFSG 161
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_GEOSF (Lipoyl synthase OS=Geobacter sp. (strain FRC-32) GN=lipA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.120e-13 Identity = 41/91 (45.05%), Postives = 50/91 (54.95%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT +ILG CTR C FCNV T + VA A+ L +VV+TS RDDLAD G+ +A TV ++ P IE LVPDF G Sbjct: 52 ATFLILGKLCTRLCSFCNV-TKQTPLAVDQAEPERVAAAVELLKLTHVVVTSPTRDDLADGGAALYAATVAAIRNASPQTKIELLVPDFAG 141
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_COREF (Lipoyl synthase OS=Corynebacterium efficiens GN=lipA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.120e-13 Identity = 38/91 (41.76%), Postives = 53/91 (58.24%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT +I G C+R C FC + ++R VAE++ L+Y IT V RDDL D+G+ +++ VRK+ EL PN +E LVPDF G Sbjct: 72 ATFLIGGANCSRRCDFCMINSARPEPLDRGEPL-RVAESVREMRLNYSTITGVTRDDLPDEGAWLYSEVVRKIHELNPNTGVENLVPDFSG 161
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_VESOH (Lipoyl synthase OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=lipA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 7.993e-13 Identity = 39/91 (42.86%), Postives = 50/91 (54.95%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT MI+G CTR C FC+V + ++A+ I L YVVITSVDRDDL D G HF + ++ P + IE L PDF+G Sbjct: 79 ATFMIMGQICTRRCPFCDVAHGKPRTLDIDEPK-HLADTIKKMRLKYVVITSVDRDDLHDGGVQHFKMCIDNIRLSTPKVKIEILTPDFKG 168 The following BLAST results are available for this feature:
BLAST of CF504318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504318 ID=CF504318; Name=CF504318; organism=Citrus sinensis; type=EST; length=275bpback to top |