CF504318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_RHOPT (Lipoyl synthase OS=Rhodopseudomonas palustris (strain TIE-1) GN=lipA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.964e-19 Identity = 49/89 (55.06%), Postives = 56/89 (62.92%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDF 267 AT MI+GDTCTR C FCNVKT VAEA GL ++VITSVDRDDLAD G+ HFA T+R ++E P IE L PDF Sbjct: 78 ATFMIMGDTCTRACAFCNVKTGMPGALDANEP-AYVAEATRKLGLQHLVITSVDRDDLADGGAAHFAATIRAVREACPTTTIEILTPDF 165
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_RHOPS (Lipoyl synthase OS=Rhodopseudomonas palustris (strain BisB5) GN=lipA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.964e-19 Identity = 49/89 (55.06%), Postives = 57/89 (64.04%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDF 267 AT MI+GDTCTR C FCNVKT VAEA GL+++VITSVDRDDLAD G+ HFA T+R ++E P IE L PDF Sbjct: 78 ATFMIMGDTCTRACAFCNVKTG-LPGALDPNEPAYVAEATRKLGLEHLVITSVDRDDLADGGAAHFAATIRAVREHCPTTTIEILTPDF 165
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_RHOPA (Lipoyl synthase OS=Rhodopseudomonas palustris GN=lipA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.964e-19 Identity = 49/89 (55.06%), Postives = 56/89 (62.92%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDF 267 AT MI+GDTCTR C FCNVKT VAEA GL ++VITSVDRDDLAD G+ HFA T+R ++E P IE L PDF Sbjct: 78 ATFMIMGDTCTRACAFCNVKTGMPGALDANEP-AYVAEATRKLGLQHLVITSVDRDDLADGGAAHFAATIRAVREACPTTTIEILTPDF 165
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_PARL1 (Lipoyl synthase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=lipA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.964e-19 Identity = 47/89 (52.81%), Postives = 56/89 (62.92%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDF 267 AT+MI+GDTCTR C FCNVKT NVA A+A GL +VVITSVDRDDLAD G+ HF + + ++ P IE L PDF Sbjct: 78 ATMMIMGDTCTRACSFCNVKTG-LPAPLDVDEPENVANAVAKLGLRHVVITSVDRDDLADGGAAHFVEVIEAIRRRSPGTTIEILTPDF 165
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_RICTY (Lipoyl synthase OS=Rickettsia typhi GN=lipA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.565e-19 Identity = 46/89 (51.69%), Postives = 57/89 (64.04%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDF 267 AT+MILG CTR CRFCNVKT R +AEA+ L++VVITSVDRDDL D G+ HFA+ + +++ PN IE L PDF Sbjct: 54 ATVMILGSVCTRACRFCNVKTGRPDLLDPHEPR-RLAEAVQKLNLNHVVITSVDRDDLEDGGASHFAECINEIRRSSPNTTIEILTPDF 141
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_RHOSK (Lipoyl synthase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=lipA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.565e-19 Identity = 47/89 (52.81%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDF 267 AT+MI+G+ CTRGC FCNV T R VA A++ GL +VV+TSVDRDDL D G+ HFAQT+R ++ P IE LVPDF Sbjct: 77 ATMMIMGEICTRGCSFCNVATGRPQALDAFEPG-RVAHAVSQLGLKHVVVTSVDRDDLEDGGAEHFAQTIRAIRHRAPATTIEVLVPDF 164
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_RHOS4 (Lipoyl synthase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=lipA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.565e-19 Identity = 47/89 (52.81%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDF 267 AT+MI+G+ CTRGC FCNV T R VA A++ GL +VV+TSVDRDDL D G+ HFAQT+R ++ P IE LVPDF Sbjct: 77 ATMMIMGEICTRGCSFCNVATGRPQALDAFEPG-RVAHAVSQLGLKHVVVTSVDRDDLEDGGAEHFAQTIRAIRHRAPATTIEVLVPDF 164
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_RHOS1 (Lipoyl synthase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=lipA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.565e-19 Identity = 47/89 (52.81%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDF 267 AT+MI+G+ CTRGC FCNV T R VA A++ GL +VV+TSVDRDDL D G+ HFAQT+R ++ P IE LVPDF Sbjct: 77 ATMMIMGEICTRGCSFCNVATGRPQALDAFEPG-RVAHAVSQLGLKHVVVTSVDRDDLEDGGAEHFAQTIRAIRHRAPATTIEVLVPDF 164
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA2_BRAJA (Lipoyl synthase 2 OS=Bradyrhizobium japonicum GN=lipA2 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.565e-19 Identity = 46/89 (51.69%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDF 267 AT MI+GDTCTR C FCNV+T VA+A+A GL++VV+TSVDRDDLAD G+ HFA T+ ++ + P IE L PDF Sbjct: 84 ATFMIMGDTCTRACAFCNVRTGLPGPLDADEPG-KVADAVAKLGLEHVVVTSVDRDDLADGGAAHFAATIAAIRAMSPATSIEILTPDF 171
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_VEREI (Lipoyl synthase OS=Verminephrobacter eiseniae (strain EF01-2) GN=lipA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.350e-19 Identity = 47/91 (51.65%), Postives = 58/91 (63.74%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT MI+GD CTR C FC+V R N+A +A+ L+YVVITSVDRDDL D GSGHF ++ +++L P IE LVPDFRG Sbjct: 91 ATFMIMGDKCTRRCPFCDVGHGRPDPLDQDEPM-NLARTVAALALEYVVITSVDRDDLRDGGSGHFVDCIQSIRKLSPQTRIEILVPDFRG 180 The following BLAST results are available for this feature:
BLAST of CF504318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504318 ID=CF504318; Name=CF504318; organism=Citrus sinensis; type=EST; length=275bpback to top |