CF504318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_PSEFS (Lipoyl synthase OS=Pseudomonas fluorescens (strain SBW25) GN=lipA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.464e-19 Identity = 47/91 (51.65%), Postives = 61/91 (67.03%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT MI+GD CTR C FC+V R + +A AIA L YVVITSVDRDDL D G+ HFA +R++++L PN+++E LVPD+RG Sbjct: 102 ATFMIMGDICTRRCPFCDVGHGRPKPLDVNEPES-LAIAIADLKLKYVVITSVDRDDLRDGGAQHFADCIREIRKLSPNVMLETLVPDYRG 191
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_NITWN (Lipoyl synthase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=lipA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.464e-19 Identity = 49/89 (55.06%), Postives = 56/89 (62.92%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDF 267 AT MI+GDTCTR C FCNVKT VAEA GL +VV+TSVDRDDL D G+ HFAQT+R ++E P IE L PDF Sbjct: 78 ATFMIMGDTCTRACAFCNVKTGMPGAIESSEPEY-VAEATRKLGLAHVVVTSVDRDDLDDGGAEHFAQTIRAIRERCPATTIEILTPDF 165
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_HAEIN (Lipoyl synthase OS=Haemophilus influenzae GN=lipA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.464e-19 Identity = 48/91 (52.75%), Postives = 59/91 (64.84%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT MILG CTR C FC+V + +AE I L YVVITSVDRDDL D+G+GHF++ V+ ++EL PN+ IE LVPDFRG Sbjct: 84 ATFMILGAICTRRCPFCDVAHGKPLPPDPEEPQ-KLAETIQDMKLKYVVITSVDRDDLPDRGAGHFSECVKAVRELNPNIKIEILVPDFRG 173
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_HAEIG (Lipoyl synthase OS=Haemophilus influenzae (strain PittGG) GN=lipA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.464e-19 Identity = 48/91 (52.75%), Postives = 59/91 (64.84%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT MILG CTR C FC+V + +AE I L YVVITSVDRDDL D+G+GHF++ V+ ++EL PN+ IE LVPDFRG Sbjct: 84 ATFMILGAICTRRCPFCDVAHGKPLPPDPEEPQ-KLAETIQDMKLKYVVITSVDRDDLPDRGAGHFSECVKAVRELNPNIKIEILVPDFRG 173
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_HAEIE (Lipoyl synthase OS=Haemophilus influenzae (strain PittEE) GN=lipA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.464e-19 Identity = 48/91 (52.75%), Postives = 59/91 (64.84%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT MILG CTR C FC+V + +AE I L YVVITSVDRDDL D+G+GHF++ V+ ++EL PN+ IE LVPDFRG Sbjct: 84 ATFMILGAICTRRCPFCDVAHGKPLPPDPEEPQ-KLAETIQDMKLKYVVITSVDRDDLPDRGAGHFSECVKAVRELNPNIKIEILVPDFRG 173
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_HAEI8 (Lipoyl synthase OS=Haemophilus influenzae (strain 86-028NP) GN=lipA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.464e-19 Identity = 48/91 (52.75%), Postives = 59/91 (64.84%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT MILG CTR C FC+V + +AE I L YVVITSVDRDDL D+G+GHF++ V+ ++EL PN+ IE LVPDFRG Sbjct: 84 ATFMILGAICTRRCPFCDVAHGKPLPPDPEEPQ-KLAETIQDMKLKYVVITSVDRDDLPDRGAGHFSECVKAVRELNPNIKIEILVPDFRG 173
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_ALHEH (Lipoyl synthase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=lipA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.464e-19 Identity = 42/91 (46.15%), Postives = 55/91 (60.44%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 ATIM++G CTR CRFC V T + A+++ GL YVV+TSVDRDDL D G+GH+A V ++E+ P +E L PDF G Sbjct: 89 ATIMLMGAVCTRACRFCAVDTGNPKGRLDHDEPAHAADSVRLMGLSYVVLTSVDRDDLEDGGAGHYAACVNAIREVNPETAVEVLTPDFNG 179
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_RICFE (Lipoyl synthase OS=Rickettsia felis GN=lipA PE=3 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 9.748e-19 Identity = 46/89 (51.69%), Postives = 57/89 (64.04%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDF 267 AT+MILG CTR CRFCNVKT R +AEA+ L +VVITSVDRDDL D G+ HFA+ + ++++ PN IE L PDF Sbjct: 54 ATVMILGSVCTRACRFCNVKTGRPDLLDPHEPQ-RLAEAVQKLNLKHVVITSVDRDDLDDGGATHFAECISEIRKSSPNTTIEILTPDF 141
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_RHOCS (Lipoyl synthase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=lipA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.748e-19 Identity = 46/89 (51.69%), Postives = 56/89 (62.92%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDF 267 AT MILG CTR C FCNV T R VAEA+A L+++V+TSVDRDDL D G+GHFA+T+R ++ P IE L PDF Sbjct: 71 ATFMILGAVCTRACAFCNVATGRPDQLDPHEPE-KVAEAVAHLKLEHIVVTSVDRDDLEDGGAGHFARTIRAIRAAAPGTTIEVLTPDF 158
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_PYRCJ (Probable lipoyl synthase OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=lipA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.748e-19 Identity = 47/91 (51.65%), Postives = 54/91 (59.34%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT +ILGD CTR C+FC VKT VAEA+A GL YVVITSVDRDDL D G+ FA V+ +K P +E L PDF G Sbjct: 50 ATFLILGDVCTRACKFCAVKTGDPRGFVDPTEPARVAEAVAKLGLRYVVITSVDRDDLPDGGASQFASVVKAVKARAPWAKVEVLTPDFGG 140 The following BLAST results are available for this feature:
BLAST of CF504318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504318 ID=CF504318; Name=CF504318; organism=Citrus sinensis; type=EST; length=275bpback to top |