CF504319

Overview
NameCF504319
Unique NameCF504319
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length389
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF504319 vs. ExPASy Swiss-Prot
Match: ARF2_BOVIN (ADP-ribosylation factor 2 OS=Bos taurus GN=ARF2 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.378e-49
Identity = 92/101 (91.09%), Postives = 96/101 (95.05%), Query Frame = 3 
Query:   87 RKRCRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDE 389
            +K  RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+R+ EAR+EL RML EDE
Sbjct:   15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDE 115

HSP 2 Score: 26.5646 bits (57), Expect = 3.378e-49
Identity = 12/18 (66.67%), Postives = 12/18 (66.67%), Query Frame = 2 
Query:   44 MGLTFTKLFSRLFAKKEM 97
            MG  F KLF  LF KKEM
Sbjct:    1 MGNVFEKLFKSLFGKKEM 18
[Close]
BLAST of CF504319 vs. ExPASy Swiss-Prot
Match: ARF1_SCHPO (ADP-ribosylation factor 1 OS=Schizosaccharomyces pombe GN=arf1 PE=2 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 3.379e-49
Identity = 90/101 (89.11%), Postives = 96/101 (95.05%), Query Frame = 3 
Query:   87 RKRCRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDE 389
            ++  RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY+NISFTVWDVGGQDKIRPLWRHYFQNTQG+IFVVDSNDR+RI EA +EL RMLNEDE
Sbjct:   15 KREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYRNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQRMLNEDE 115

HSP 2 Score: 26.9498 bits (58), Expect = 3.379e-49
Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2 
Query:   44 MGLTFTKLFSRLFAKKEM 97
            MGL+ +KLF  LF K+EM
Sbjct:    1 MGLSISKLFQSLFGKREM 18
[Close]
BLAST of CF504319 vs. ExPASy Swiss-Prot
Match: ARF5_RAT (ADP-ribosylation factor 5 OS=Rattus norvegicus GN=Arf5 PE=1 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 4.404e-49
Identity = 89/101 (88.12%), Postives = 95/101 (94.06%), Query Frame = 3 
Query:   87 RKRCRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDE 389
            +K+ RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+R+ E+ DEL +ML EDE
Sbjct:   15 KKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDE 115

HSP 2 Score: 28.8758 bits (63), Expect = 4.404e-49
Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = 2 
Query:   44 MGLTFTKLFSRLFAKKEM 97
            MGLT + LFSR+F KK+M
Sbjct:    1 MGLTVSALFSRIFGKKQM 18
[Close]
BLAST of CF504319 vs. ExPASy Swiss-Prot
Match: ARF5_MOUSE (ADP-ribosylation factor 5 OS=Mus musculus GN=Arf5 PE=2 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 4.404e-49
Identity = 89/101 (88.12%), Postives = 95/101 (94.06%), Query Frame = 3 
Query:   87 RKRCRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDE 389
            +K+ RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+R+ E+ DEL +ML EDE
Sbjct:   15 KKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDE 115

HSP 2 Score: 28.8758 bits (63), Expect = 4.404e-49
Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = 2 
Query:   44 MGLTFTKLFSRLFAKKEM 97
            MGLT + LFSR+F KK+M
Sbjct:    1 MGLTVSALFSRIFGKKQM 18
[Close]
BLAST of CF504319 vs. ExPASy Swiss-Prot
Match: ARF5_HUMAN (ADP-ribosylation factor 5 OS=Homo sapiens GN=ARF5 PE=1 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 4.404e-49
Identity = 89/101 (88.12%), Postives = 95/101 (94.06%), Query Frame = 3 
Query:   87 RKRCRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDE 389
            +K+ RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+R+ E+ DEL +ML EDE
Sbjct:   15 KKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDE 115

HSP 2 Score: 28.8758 bits (63), Expect = 4.404e-49
Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = 2 
Query:   44 MGLTFTKLFSRLFAKKEM 97
            MGLT + LFSR+F KK+M
Sbjct:    1 MGLTVSALFSRIFGKKQM 18
[Close]
BLAST of CF504319 vs. ExPASy Swiss-Prot
Match: ARF4_BOVIN (ADP-ribosylation factor 4 OS=Bos taurus GN=ARF4 PE=2 SV=3)

HSP 1 Score: 184.111 bits (466), Expect = 4.404e-49
Identity = 89/101 (88.12%), Postives = 94/101 (93.07%), Query Frame = 3 
Query:   87 RKRCRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDE 389
            +K+ RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RI E  +EL +ML EDE
Sbjct:   15 KKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEGAEELQKMLQEDE 115

HSP 2 Score: 30.4166 bits (67), Expect = 4.404e-49
Identity = 13/18 (72.22%), Postives = 15/18 (83.33%), Query Frame = 2 
Query:   44 MGLTFTKLFSRLFAKKEM 97
            MGLT + LFSRLF KK+M
Sbjct:    1 MGLTISSLFSRLFGKKQM 18
[Close]
BLAST of CF504319 vs. ExPASy Swiss-Prot
Match: ARF2_DROME (ADP-ribosylation factor 2 OS=Drosophila melanogaster GN=Arf102F PE=1 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 1.271e-48
Identity = 91/101 (90.10%), Postives = 93/101 (92.08%), Query Frame = 3 
Query:   87 RKRCRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDE 389
            +K+ RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRI EA  EL  ML EDE
Sbjct:   15 KKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDE 115

HSP 2 Score: 26.9498 bits (58), Expect = 1.271e-48
Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2 
Query:   44 MGLTFTKLFSRLFAKKEM 97
            MGLT + L +RLF KK+M
Sbjct:    1 MGLTISSLLTRLFGKKQM 18
[Close]
BLAST of CF504319 vs. ExPASy Swiss-Prot
Match: ARF_ASHGO (ADP-ribosylation factor OS=Ashbya gossypii GN=ARF1 PE=3 SV=3)

HSP 1 Score: 183.726 bits (465), Expect = 1.656e-48
Identity = 87/100 (87.00%), Postives = 93/100 (93.00%), Query Frame = 3 
Query:   90 KRCRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDE 389
            K  RILMVGLD AGKTT+LYKLKLGE+VTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYF+NT+G+IFVVDSNDR RI EAR+ L RMLNEDE
Sbjct:   16 KEMRILMVGLDGAGKTTVLYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFRNTEGIIFVVDSNDRSRIAEAREVLQRMLNEDE 115

HSP 2 Score: 28.8758 bits (63), Expect = 1.656e-48
Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = 2 
Query:   44 MGLTFTKLFSRLFAKKEM 97
            MG++F+KLFS LF  KEM
Sbjct:    1 MGVSFSKLFSNLFGHKEM 18
[Close]
BLAST of CF504319 vs. ExPASy Swiss-Prot
Match: ARF5_CHICK (ADP-ribosylation factor 5 OS=Gallus gallus GN=ARF5 PE=2 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 2.160e-48
Identity = 88/101 (87.13%), Postives = 95/101 (94.06%), Query Frame = 3 
Query:   87 RKRCRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDE 389
            +K+ RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+R+ E+ +EL +ML EDE
Sbjct:   15 KKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESAEELQKMLQEDE 115

HSP 2 Score: 28.1054 bits (61), Expect = 2.160e-48
Identity = 11/18 (61.11%), Postives = 15/18 (83.33%), Query Frame = 2 
Query:   44 MGLTFTKLFSRLFAKKEM 97
            MGLT + +FSR+F KK+M
Sbjct:    1 MGLTVSAIFSRIFGKKQM 18
[Close]
BLAST of CF504319 vs. ExPASy Swiss-Prot
Match: ARF1_LOCMI (ADP-ribosylation factor 1 OS=Locusta migratoria GN=ARF1 PE=2 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 4.490e-48
Identity = 94/105 (89.52%), Postives = 97/105 (92.38%), Query Frame = 3 
Query:   75 GSLPRKRCRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDE 389
            G   +K  RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RI EAR+EL RML EDE
Sbjct:   11 GLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDE 115
The following BLAST results are available for this feature:
BLAST of CF504319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
ARF2_BOVIN3.378e-4991.09ADP-ribosylation factor 2 OS=Bos taurus GN=ARF2 PE... [more]
ARF1_SCHPO3.379e-4989.11ADP-ribosylation factor 1 OS=Schizosaccharomyces p... [more]
ARF5_RAT4.404e-4988.12ADP-ribosylation factor 5 OS=Rattus norvegicus GN=... [more]
ARF5_MOUSE4.404e-4988.12ADP-ribosylation factor 5 OS=Mus musculus GN=Arf5 ... [more]
ARF5_HUMAN4.404e-4988.12ADP-ribosylation factor 5 OS=Homo sapiens GN=ARF5 ... [more]
ARF4_BOVIN4.404e-4988.12ADP-ribosylation factor 4 OS=Bos taurus GN=ARF4 PE... [more]
ARF2_DROME1.271e-4890.10ADP-ribosylation factor 2 OS=Drosophila melanogast... [more]
ARF_ASHGO1.656e-4887.00ADP-ribosylation factor OS=Ashbya gossypii GN=ARF1... [more]
ARF5_CHICK2.160e-4887.13ADP-ribosylation factor 5 OS=Gallus gallus GN=ARF5... [more]
ARF1_LOCMI4.490e-4889.52ADP-ribosylation factor 1 OS=Locusta migratoria GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-808 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-16_H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504319 ID=CF504319; Name=CF504319; organism=Citrus sinensis; type=EST; length=389bp
CCTCTCTCTCTCGCGTTCTCTGAAGTGATCCCCAGCTGGAAGAATGGGGC
TGACTTTCACAAAGCTGTTCAGCCGGCTCTTTGCCAAGAAAGAGATGCCG
AATTCTAATGGTTGGTCTTGATGCTGCTGGTAAGACCACTATCTTGTACA
AGCTCAAGCTTGGAGAGATTGTCACCACAATTCCTACCATTGGGTTTAAT
GTGGAGACCGTTGAATATAAAAACATCAGTTTCACTGTGTGGGATGTTGG
TGGCCAGGACAAGATTCGTCCCTTGTGGAGGCATTATTTCCAGAACACTC
AAGGTCTCATTTTTGTTGTGGACAGCAATGACAGAGACCGTATTGTAGAA
GCAAGGGATGAATTGCATAGGATGTTGAATGAGGATGAG
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