CF504319
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504319 vs. ExPASy Swiss-Prot
Match: SAR1B_ARATH (GTP-binding protein SAR1B OS=Arabidopsis thaliana GN=SAR1B PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.045e-12 Identity = 34/100 (34.00%), Postives = 59/100 (59.00%), Query Frame = 3 Query: 87 RKRCRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNED 386 +K +IL +GLD AGKTT+L+ LK +V PT E + I F +D+GG R +W+ Y+ ++++VD+ D++R E++ EL +L+++ Sbjct: 18 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKRELDALLSDE 117
BLAST of CF504319 vs. ExPASy Swiss-Prot
Match: SAR1_TOBAC (GTP-binding protein SAR1 OS=Nicotiana tabacum GN=SAR1 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.782e-12 Identity = 35/98 (35.71%), Postives = 57/98 (58.16%), Query Frame = 3 Query: 87 RKRCRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLN 380 +K +IL +GLD AGKTT+L+ LK +V PT E + I F +D+GG R +W+ Y+ ++++VDS D++R E++ EL +L+ Sbjct: 18 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDSFDKERFAESKKELDALLS 115
BLAST of CF504319 vs. ExPASy Swiss-Prot
Match: ARL10_HUMAN (ADP-ribosylation factor-like protein 10 OS=Homo sapiens GN=ARL10 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.328e-12 Identity = 42/121 (34.71%), Postives = 65/121 (53.72%), Query Frame = 3 Query: 30 PQLEEWG*LSQSCSAGSLPRKRCR-ILMVGLDAAGKTTILYKLK-LGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNED 386 P+ +EW + +L R +L++GLD AGK+T L L + IPT GFN + K+ + ++GG +R W+ + L+FVVDS DR R+ AR ELH++L++D Sbjct: 55 PEWDEWDPEDEEDEEPALEELEQREVLVLGLDGAGKSTFLRVLSGKPPLEGHIPTWGFNSVRLPTKDFEVDLLEIGGSQNLRFYWKEFVSEVDVLVFVVDSADRLRLPWARQELHKLLDKD 175
BLAST of CF504319 vs. ExPASy Swiss-Prot
Match: ARLX_DICDI (ADP-ribosylation factor-like protein DDB_G0292332 OS=Dictyostelium discoideum GN=DDB_G0292332 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.040e-12 Identity = 36/107 (33.64%), Postives = 63/107 (58.88%), Query Frame = 3 Query: 99 RILMVGLDAAGKTTILYKLK--LGEIVTT---------IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYF-QNTQGLIFVVDSNDRDRIVEARDELHRMLNE 383 +++++G++ GKTT+LY + E +TT IPT GFNVE++ + + F +WD+GG++ R +RHY +IFV DS+D + + E++ E + N+ Sbjct: 19 KVMILGVENVGKTTLLYNIYKFYSENITTTTLSSLPIPIPTNGFNVESIVIEQVKFDIWDIGGKETNRICYRHYLTSEIDSIIFVFDSSDINSLEESKKEYQYLKNQ 125
BLAST of CF504319 vs. ExPASy Swiss-Prot
Match: SAR1_ENCCU (Small COPII coat GTPase SAR1 OS=Encephalitozoon cuniculi GN=SAR1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.509e-11 Identity = 37/101 (36.63%), Postives = 55/101 (54.46%), Query Frame = 3 Query: 78 SLPRKRCRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLN 380 SL K IL +G+D AGKTT++ KLK +PT + +E N+ V D+GG R WR YF + G++F+VD +D +R E R+ +L+ Sbjct: 30 SLFGKPSSILFLGIDNAGKTTLVNKLKSDSTDVYMPTHHPSTSYIEIGNLKAQVIDLGGHTAARLAWRDYFYDCHGIVFIVDVHDVERFQEVREAYETVLS 130
BLAST of CF504319 vs. ExPASy Swiss-Prot
Match: ARL10_MOUSE (ADP-ribosylation factor-like protein 10 OS=Mus musculus GN=Arl10 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.733e-11 Identity = 37/120 (30.83%), Postives = 61/120 (50.83%), Query Frame = 3 Query: 30 PQLEEWG*LSQSCSAGSLPRKRCRILMVGLDAAGKTTILYKLK-LGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNED 386 PQ +EW + ++ +L++GLD +GK+T L L + +PT GFN + KN + ++G +R W+ + L+F+VDS DR R+ AR EL ++L+ D Sbjct: 55 PQWDEWEPEDEEDEPALEELEQREVLVLGLDGSGKSTFLRMLAGKPPVEGHVPTWGFNSVRLPTKNFEVDLLEIGDSQNLRFYWKEFVNEVDVLVFMVDSTDRLRLPWARQELQKLLDRD 174
BLAST of CF504319 vs. ExPASy Swiss-Prot
Match: ARL9_HUMAN (ADP-ribosylation factor-like protein 9 OS=Homo sapiens GN=ARL9 PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.488e-11 Identity = 34/97 (35.05%), Postives = 54/97 (55.67%), Query Frame = 3 Query: 90 KRCRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRML 377 K +IL++GLD AGKT++L+ L + ++ PT GF+ + ++ ++GG R W Y LIFVVDS D R+ EA+ LH+++ Sbjct: 17 KNKQILVLGLDGAGKTSVLHSLASNRVQHSVAPTQGFHAVCINTEDSQMEFLEIGGSKPFRSYWEMYLSKGLLLIFVVDSADHSRLPEAKKYLHQLI 113 The following BLAST results are available for this feature:
BLAST of CF504319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 217
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504319 ID=CF504319; Name=CF504319; organism=Citrus sinensis; type=EST; length=389bpback to top |