CF504321

Overview
NameCF504321
Unique NameCF504321
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length500
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504321 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 6.807e-46
Identity = 96/161 (59.63%), Postives = 115/161 (71.43%), Query Frame = 1
Query:    4 ESNRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACY 486
            E NR+A R LL   P   +Y+SG ILFEETLYQ T  G+  VDVL E  ++PGIKVDKG V LAG+N E+  QGLDGLA R   YY+ GARFAKWR V+ I PN PS LA+ E A GLARYA I Q+NGLVPIVEPEIL+DG H I++  +V ++V A  +
Sbjct:   50 EVNRQAWRTLLVTVPTLGEYISGAILFEETLYQSTTDGRKIVDVLIEQNIIPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAEVF 209          
BLAST of CF504321 vs. ExPASy Swiss-Prot
Match: ALF1_CAEEL (Fructose-bisphosphate aldolase 1 OS=Caenorhabditis elegans GN=aldo-1 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 2.586e-45
Identity = 97/167 (58.08%), Postives = 117/167 (70.06%), Query Frame = 1
Query:    4 ESNRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGL-ARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALN 498
            E NRR  R+LLF     L +Y+SGVI+F ET YQKT  GKPF  +L+E G++PGIKVDKG V +AGT GE TTQGLD L  RC +Y + GA+FAKWR V KI    PS  A+ E A+ L +RYA ICQ+NGLVPIVEPEIL DG H + +   +TE VL+  Y ALN
Sbjct:   53 EENRRKYRQLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTIGEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIASNLGSRYASICQQNGLVPIVEPEILPDGEHCLARGQKITETVLSYVYHALN 219          
BLAST of CF504321 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 180.644 bits (457), Expect = 3.378e-45
Identity = 95/161 (59.01%), Postives = 115/161 (71.43%), Query Frame = 1
Query:    4 ESNRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACY 486
            E+NR+A R LL   PG  QY+SG ILFEETLYQ T  GK  VDVL E G++PGIKVDKG + L G+N E+  QGLDGLA R   YY+ GARFAKWR V+ I PN PS LA+ E A GLARYA I Q+NGL PI+EPEI++DG H I++   V ++V A  +
Sbjct:   90 EANRQAYRTLLISAPGLGQYVSGAILFEETLYQSTTDGKKMVDVLIEQGIVPGIKVDKGWLPLPGSNDESWCQGLDGLACRSAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAITQDNGLDPILEPEIMLDGEHGIDRTFRVAQQVWAEVF 249          
BLAST of CF504321 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.328e-41
Identity = 93/162 (57.41%), Postives = 113/162 (69.75%), Query Frame = 1
Query:    4 ESNRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYK 489
            E NRRA RELL   PG  QY+SG ILFEETLYQ TA+GK FVDV+KE  ++PGIKVDKG V    T   +   GLDG     + YY+AGARFAKWR+V+ I P+ PS + +   A GLARYA I Q  GLVPIVEPE+L+DG HDI++C +V E + A  +K
Sbjct:   71 EENRRAYRELLVTAPGLGQYISGAILFEETLYQSTASGKKFVDVMKEQNIVPGIKVDKGLVP-CPTPTMSWCMGLDGWTSAAE-YYKAGARFAKWRSVVSI-PHGPS-IMLPRLAYGLARYAAIAQNAGLVPIVEPEVLLDGEHDIDRCLEVQEAIWAETFK 228          
BLAST of CF504321 vs. ExPASy Swiss-Prot
Match: ALF_TRYBB (Fructose-bisphosphate aldolase, glycosomal OS=Trypanosoma brucei brucei GN=ALD PE=1 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 4.139e-35
Identity = 79/164 (48.17%), Postives = 99/164 (60.37%), Query Frame = 1
Query:   10 NRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELA-GTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALN 498
            +RR  R L+    G  QY+SGVIL +ET+YQK   G+ F   L+  GV+PGIK D G   L  G  GE  T GLDG  +R +KYY  G RF KWR V KI     S+  +  NA  LARYAI+ Q  GLVPIVEPE+++DG HDI  C  V++ V +    AL+
Sbjct:   65 HRRQYRALMLECEGFEQYISGVILHDETVYQKAKTGETFPQYLRRRGVVPGIKTDCGLEPLVEGAKGEQMTAGLDGYIKRAKKYYAMGCRFCKWRNVYKIQNGTVSEAVVRFNAETLARYAILSQLCGLVPIVEPEVMIDGTHDIETCQRVSQHVWSEVVSALH 228          
BLAST of CF504321 vs. ExPASy Swiss-Prot
Match: ALF_ENCCU (Fructose-bisphosphate aldolase OS=Encephalitozoon cuniculi GN=ECU01_0240 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 2.511e-32
Identity = 72/165 (43.64%), Postives = 104/165 (63.03%), Query Frame = 1
Query:    4 ESNRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALN 498
            E NRR  RE+LF T G  +Y+ GVIL +ET  Q + +G P  ++LK+ G+  GIK+DKG ++      E  + GL+ L  RC+      A FAKWR++       PS+  INEN + LA+YAIICQ+NGLVPIVEPE+ ++G + + +  +VT ++L+   K LN
Sbjct:   47 EENRRKFREILFSTKGIERYIGGVILNQETFEQTSGSGVPLTELLKKKGIEIGIKLDKGLIDYK--EKEKISVGLEDLDLRCKSSAFKDATFAKWRSLFYFYDGIPSEDCINENCSILAKYAIICQKNGLVPIVEPEVFLEGDYSMKRSYEVTRQILSTLMKYLN 209          
The following BLAST results are available for this feature:
BLAST of CF504321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALFC1_PEA6.807e-4659.63Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALF1_CAEEL2.586e-4558.08Fructose-bisphosphate aldolase 1 OS=Caenorhabditis... [more]
ALFC_SPIOL3.378e-4559.01Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALFC_CHLRE1.328e-4157.41Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF_TRYBB4.139e-3548.17Fructose-bisphosphate aldolase, glycosomal OS=Tryp... [more]
ALF_ENCCU2.511e-3243.64Fructose-bisphosphate aldolase OS=Encephalitozoon ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-810 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-16_H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504321 ID=CF504321; Name=CF504321; organism=Citrus sinensis; type=EST; length=500bp
GTTGAGTCAAACAGGCGTGCTCTCCGCGAGCTCCTTTTCTGCACTCCCGG
TGCCCTTCAGTACCTCAGTGGTGTCATCCTCTTCGAGGAGACCCTCTACC
AGAAGACTGCTGCTGGCAAGCCCTTTGTTGATGTCTTGAAGGAGGGTGGA
GTCCTCCCTGGAATTAAGGTTGACAAGGGTACTGTTGAGCTTGCTGGTAC
CAATGGTGAGACCACCACCCAGGGTCTTGATGGCCTCGCCCAGCGCTGCC
AGAAATACTATGAAGCTGGTGCTCGTTTTGCCAAATGGCGTGCTGTTCTT
AAGATTGGCCCTAATGAGCCTTCGCAGCTGGCCATCAATGAGAATGCCAA
TGGCCTGGCCCGATATGCTATCATCTGCCAGGAGAATGGCCTTGTTCCCA
TTGTTGAACCTGAGATCCTTGTTGACGGTCCCCATGACATTAACAAGTGT
GCTGATGTGACCGAGCGTGTTCTTGCTGCATGCTACAAGGCTCTGAATGA
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