CF504354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504354 vs. ExPASy Swiss-Prot
Match: RAN_DROME (GTP-binding nuclear protein Ran OS=Drosophila melanogaster GN=ran PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 2.215e-41 Identity = 73/89 (82.02%), Postives = 78/89 (87.64%), Query Frame = 3 Query: 135 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 401 GKTTFVKRH+TGEFEKKY T+GVEVHPL F TN G IRF WDTAGQEKFGGLRDGYYI GQCA+IMFDVT+R+TYKNVP WHRDL R Sbjct: 22 GKTTFVKRHMTGEFEKKYVATLGVEVHPLIFHTNRGAIRFNVWDTAGQEKFGGLRDGYYIQGQCAVIMFDVTSRVTYKNVPNWHRDLVR 110 HSP 2 Score: 29.6462 bits (65), Expect = 2.215e-41 Identity = 12/19 (63.16%), Postives = 15/19 (78.95%), Query Frame = 2 Query: 77 QQTVDYPSFKLVIVGDGGT 133 Q+ D P+FK V+VGDGGT Sbjct: 3 QEGQDIPTFKCVLVGDGGT 21
BLAST of CF504354 vs. ExPASy Swiss-Prot
Match: RAN_ONCVO (GTP-binding nuclear protein Ran OS=Onchocerca volvulus GN=ran-1 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.760e-41 Identity = 74/89 (83.15%), Postives = 78/89 (87.64%), Query Frame = 3 Query: 135 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 401 GKTTFVKRHLTG+ EKKY T+GVEVHPL F TN G+IRF WDTAGQEKFGGLRDGYYI GQCAIIMFDVTAR+TYKNVP WHRDL R Sbjct: 21 GKTTFVKRHLTGDPEKKYVATLGVEVHPLIFHTNRGQIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHRDLAR 109 HSP 2 Score: 30.4166 bits (67), Expect = 3.760e-41 Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 2 Query: 89 DYPSFKLVIVGDGGT 133 D P+FKLV+VGDGGT Sbjct: 6 DIPTFKLVLVGDGGT 20
BLAST of CF504354 vs. ExPASy Swiss-Prot
Match: GSP1_ASHGO (GTP-binding nuclear protein GSP1/Ran OS=Ashbya gossypii GN=GSP1 PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 3.761e-41 Identity = 73/89 (82.02%), Postives = 79/89 (88.76%), Query Frame = 3 Query: 135 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 401 GKTTFVKRHLTGEFEKKY TIGVEVHPL F+TN G+I+F WDTAGQEKFGGLRDGYYI+ QC IIMFDVT+R+TYKNVP WHRDL R Sbjct: 19 GKTTFVKRHLTGEFEKKYIATIGVEVHPLAFYTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCGIIMFDVTSRITYKNVPNWHRDLVR 107 HSP 2 Score: 28.8758 bits (63), Expect = 3.761e-41 Identity = 11/15 (73.33%), Postives = 14/15 (93.33%), Query Frame = 2 Query: 89 DYPSFKLVIVGDGGT 133 + P+FKLV+VGDGGT Sbjct: 4 EVPTFKLVLVGDGGT 18
BLAST of CF504354 vs. ExPASy Swiss-Prot
Match: GSP1_NEUCR (GTP-binding nuclear protein GSP1/Ran OS=Neurospora crassa GN=gsp-1 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 4.899e-41 Identity = 73/89 (82.02%), Postives = 79/89 (88.76%), Query Frame = 3 Query: 135 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 401 GKTTFVKRHLTGEFEKKY T+GVEVHPL F TN G+I+F WDTAGQEKFGGLRDGYYI+GQC IIMFDVT+R+TYKNVP WHRDL R Sbjct: 19 GKTTFVKRHLTGEFEKKYMATLGVEVHPLGFSTNFGQIQFDVWDTAGQEKFGGLRDGYYINGQCGIIMFDVTSRITYKNVPNWHRDLTR 107 HSP 2 Score: 28.4906 bits (62), Expect = 4.899e-41 Identity = 11/13 (84.62%), Postives = 13/13 (100.00%), Query Frame = 2 Query: 95 PSFKLVIVGDGGT 133 P+FKLV+VGDGGT Sbjct: 6 PTFKLVLVGDGGT 18
BLAST of CF504354 vs. ExPASy Swiss-Prot
Match: RAN_BRUMA (GTP-binding nuclear protein Ran OS=Brugia malayi PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.384e-41 Identity = 73/89 (82.02%), Postives = 77/89 (86.52%), Query Frame = 3 Query: 135 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 401 GKTTFVKRHLTG+FEKKY T+GVEVHPL F TN G+IRF WDTAGQEKFGGLRDGYYI GQCA MFDVTAR+TYKNVP WHRDL R Sbjct: 21 GKTTFVKRHLTGDFEKKYVATLGVEVHPLIFHTNRGQIRFNVWDTAGQEKFGGLRDGYYIQGQCAFNMFDVTARVTYKNVPNWHRDLVR 109 HSP 2 Score: 30.4166 bits (67), Expect = 6.384e-41 Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 2 Query: 89 DYPSFKLVIVGDGGT 133 D P+FKLV+VGDGGT Sbjct: 6 DIPTFKLVLVGDGGT 20
BLAST of CF504354 vs. ExPASy Swiss-Prot
Match: GSP1_CANGA (GTP-binding nuclear protein GSP1/Ran OS=Candida glabrata GN=GSP1 PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 8.320e-41 Identity = 73/89 (82.02%), Postives = 78/89 (87.64%), Query Frame = 3 Query: 135 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 401 GKTTFVKRHLTGEFEKKY TIGVEVHPL F TN G+I+F WDTAGQEKFGGLRDGYYI+ QC IIMFDVT+R+TYKNVP WHRDL R Sbjct: 19 GKTTFVKRHLTGEFEKKYIATIGVEVHPLAFHTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCGIIMFDVTSRITYKNVPNWHRDLVR 107 HSP 2 Score: 29.261 bits (64), Expect = 8.320e-41 Identity = 11/17 (64.71%), Postives = 15/17 (88.24%), Query Frame = 2 Query: 83 TVDYPSFKLVIVGDGGT 133 + + P+FKLV+VGDGGT Sbjct: 2 SAEVPTFKLVLVGDGGT 18
BLAST of CF504354 vs. ExPASy Swiss-Prot
Match: GSP1_CANAL (GTP-binding nuclear protein GSP1/Ran OS=Candida albicans GN=GSP1 PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 3.124e-40 Identity = 71/89 (79.78%), Postives = 79/89 (88.76%), Query Frame = 3 Query: 135 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 401 GKTTFVKRHLTGEFEKKY T+GVEV+PL F TN G+++F WDTAGQEKFGGLRDGYYI+GQC IIMFDVT+R+TYKNVP WHRDL R Sbjct: 19 GKTTFVKRHLTGEFEKKYIATLGVEVNPLGFHTNFGELKFDVWDTAGQEKFGGLRDGYYINGQCGIIMFDVTSRITYKNVPNWHRDLVR 107 HSP 2 Score: 28.8758 bits (63), Expect = 3.124e-40 Identity = 11/15 (73.33%), Postives = 14/15 (93.33%), Query Frame = 2 Query: 89 DYPSFKLVIVGDGGT 133 + P+FKLV+VGDGGT Sbjct: 4 EVPTFKLVLVGDGGT 18
BLAST of CF504354 vs. ExPASy Swiss-Prot
Match: RAN_XENTR (GTP-binding nuclear protein Ran OS=Xenopus tropicalis GN=ran PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 1.991e-39 Identity = 73/89 (82.02%), Postives = 77/89 (86.52%), Query Frame = 3 Query: 135 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 401 GKTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I+F WDTAGQEKFGGLRDGYYI QCAIIMFDVT+R+TYKNVP WHRDL R Sbjct: 22 GKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVR 110 HSP 2 Score: 25.409 bits (54), Expect = 1.991e-39 Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = 2 Query: 101 FKLVIVGDGGT 133 FKLV+VGDGGT Sbjct: 11 FKLVLVGDGGT 21
BLAST of CF504354 vs. ExPASy Swiss-Prot
Match: RAN_XENLA (GTP-binding nuclear protein Ran OS=Xenopus laevis GN=ran PE=1 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 1.991e-39 Identity = 73/89 (82.02%), Postives = 77/89 (86.52%), Query Frame = 3 Query: 135 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 401 GKTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I+F WDTAGQEKFGGLRDGYYI QCAIIMFDVT+R+TYKNVP WHRDL R Sbjct: 22 GKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVR 110 HSP 2 Score: 25.409 bits (54), Expect = 1.991e-39 Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = 2 Query: 101 FKLVIVGDGGT 133 FKLV+VGDGGT Sbjct: 11 FKLVLVGDGGT 21
BLAST of CF504354 vs. ExPASy Swiss-Prot
Match: RAN_RAT (GTP-binding nuclear protein Ran OS=Rattus norvegicus GN=Ran PE=1 SV=3) HSP 1 Score: 157.918 bits (398), Expect = 1.991e-39 Identity = 73/89 (82.02%), Postives = 77/89 (86.52%), Query Frame = 3 Query: 135 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 401 GKTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I+F WDTAGQEKFGGLRDGYYI QCAIIMFDVT+R+TYKNVP WHRDL R Sbjct: 22 GKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVR 110 HSP 2 Score: 25.409 bits (54), Expect = 1.991e-39 Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = 2 Query: 101 FKLVIVGDGGT 133 FKLV+VGDGGT Sbjct: 11 FKLVLVGDGGT 21 The following BLAST results are available for this feature:
BLAST of CF504354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504354 ID=CF504354; Name=CF504354; organism=Citrus sinensis; type=EST; length=401bpback to top |