CF504354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504354 vs. ExPASy Swiss-Prot
Match: GSP1_ENCCU (GTP-binding nuclear protein GSP1 OS=Encephalitozoon cuniculi GN=GSP1 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 6.883e-17 Identity = 42/87 (48.28%), Postives = 55/87 (63.22%), Query Frame = 3 Query: 135 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK-IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRD 392 GKTT++ R L G FEK Y T+G HP+ F + G I+F WDTAGQEK L+D YYI AI FDVT+R+T +N+ W ++ Sbjct: 19 GKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVIKFNVWDTAGQEKKAVLKDVYYIGASGAIFFFDVTSRITCQNLARWVKE 105
BLAST of CF504354 vs. ExPASy Swiss-Prot
Match: RB11C_DICDI (Ras-related protein Rab-11C OS=Dictyostelium discoideum GN=rab11C PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.707e-12 Identity = 33/89 (37.08%), Postives = 51/89 (57.30%), Query Frame = 3 Query: 129 APGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL 395 A GK+ + R EF +K + TIGV+ + I CWDTAGQE+F + GYY A+I++D+T+++++KNV W +L Sbjct: 20 AVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQCWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNEL 108
BLAST of CF504354 vs. ExPASy Swiss-Prot
Match: RBH1C_ARATH (Ras-related protein RABH1C OS=Arabidopsis thaliana GN=RABH1C PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.309e-11 Identity = 31/89 (34.83%), Postives = 48/89 (53.93%), Query Frame = 3 Query: 135 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 401 GKT+ + R + +F+ Y+PTIG++ + +R WDTAGQE+F L Y AI+++DV+ R T+ N W D+ R Sbjct: 21 GKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHR 109
BLAST of CF504354 vs. ExPASy Swiss-Prot
Match: RAB19_XENTR (Ras-related protein Rab-19 OS=Xenopus tropicalis GN=rab19 PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.371e-11 Identity = 36/101 (35.64%), Postives = 54/101 (53.47%), Query Frame = 3 Query: 81 KLLIIQASNL*LSAMVAPGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTW 383 K+++I SN+ GKT V R +G F + TIGV+ + N K++ WDTAGQE+F + YY AII +D+T R ++++VP W Sbjct: 17 KIILIGDSNV--------GKTCVVHRFQSGVFAHNQQNTIGVDFTVRNMNINGKKVKVQVWDTAGQERFRTITQSYYRSAHGAIIAYDITRRQSFESVPHW 109
BLAST of CF504354 vs. ExPASy Swiss-Prot
Match: RAB19_RAT (Ras-related protein Rab-19 OS=Rattus norvegicus GN=Rab19 PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.627e-11 Identity = 35/123 (28.46%), Postives = 64/123 (52.03%), Query Frame = 3 Query: 27 LKFKIQTQQINSWLCRISKLLIIQASNL*LSAMVAPGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL 395 ++F + ++ + + K+++I SN+ GKT V+ +G + + + TIGV+ + K++ WDTAGQE+F + YY AII +D+T R T+++VP W ++ Sbjct: 1 MQFSSAARTVDENVDYLFKVILIGDSNV--------GKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEI 115 The following BLAST results are available for this feature:
BLAST of CF504354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504354 ID=CF504354; Name=CF504354; organism=Citrus sinensis; type=EST; length=401bpback to top |