CF504355

Overview
NameCF504355
Unique NameCF504355
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length316
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: ERF08_ARATH (Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana GN=ERF008 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.699e-15
Identity = 37/53 (69.81%), Postives = 44/53 (83.02%), Query Frame = 2
Query:  155 YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAK 313
            YKG+R RKWGK+V+EIR PN R+RIWLGSY T E AARA+D A+F LRG SA+
Sbjct:   28 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSAR 80          
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: ERF55_ARATH (Ethylene-responsive transcription factor ERF055 OS=Arabidopsis thaliana GN=ERF055 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.430e-15
Identity = 38/64 (59.38%), Postives = 50/64 (78.12%), Query Frame = 2
Query:  122 VEKPAERCDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAK 313
            V KPA+     Y+GVR+R WGK+V+EIRLP +R R+WLG++DTAE+AA A+D A F LRG SA+
Sbjct:  136 VSKPAKL----YRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDRAAFKLRGDSAR 195          
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: ERF56_ARATH (Ethylene-responsive transcription factor ERF056 OS=Arabidopsis thaliana GN=ERF056 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.101e-14
Identity = 40/98 (40.82%), Postives = 63/98 (64.29%), Query Frame = 2
Query:   23 NHTQKFRVNSIQHHSSKSRIPIT*-NPLKMVKHVVEKPAERCDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAK 313
            N    ++++ IQ+  +  R  I+  +P ++    +     +  + Y+GVR+R WGK+V+EIRLP +R R+WLG+++TAEKAA A+D A F LRG  AK
Sbjct:   26 NQLTPYQIHQIQNQLNHRRSTISNLSPNRIRMKNLTPSTSKTKNLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFETAEKAALAYDQAAFQLRGDIAK 123          
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: ERF11_ARATH (Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana GN=ERF011 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.878e-14
Identity = 34/52 (65.38%), Postives = 43/52 (82.69%), Query Frame = 2
Query:  155 YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSA 310
            +KG+R RKWGK+V+EIR PN R+R+WLGSY T E AARA+D A+F LRG +A
Sbjct:   21 FKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTA 72          
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: RAP21_ARATH (Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana GN=RAP2-1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.453e-14
Identity = 34/53 (64.15%), Postives = 44/53 (83.02%), Query Frame = 2
Query:  155 YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAK 313
            Y+G+R+RKWGK+V+EIR PN R+R+WLGSY T   AARA+D A+F LRG SA+
Sbjct:   31 YRGIRRRKWGKWVAEIREPNKRSRLWLGSYTTDIAAARAYDVAVFYLRGPSAR 83          
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: ERF60_ARATH (Ethylene-responsive transcription factor ERF060 OS=Arabidopsis thaliana GN=ERF060 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.453e-14
Identity = 41/101 (40.59%), Postives = 63/101 (62.38%), Query Frame = 2
Query:   23 NHTQKFRVNSIQHHSSKSRIPIT*N----PLKMVKHVVEKPAERCDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAK 313
            N    ++++ IQ+  ++ R  I+ N    P+ M     +K        Y+GVR+R WGK+V+EIRLP +R R+WLG++DTAE+AA A+D A + LRG  A+
Sbjct:   52 NQLTPYQIHQIQNQLNQRRNIISPNLAPKPVPMKNMTAQK-------LYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAAMAYDLAAYKLRGEFAR 145          
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: ERF54_ARATH (Ethylene-responsive transcription factor ERF054 OS=Arabidopsis thaliana GN=ERF054 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.203e-14
Identity = 34/52 (65.38%), Postives = 44/52 (84.62%), Query Frame = 2
Query:  155 YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSA 310
            Y+GVR+R+WGK+V+EIR P SRAR+WLG++DTAE+AA A+D   F LRG SA
Sbjct:  143 YRGVRQRQWGKWVAEIRKPRSRARLWLGTFDTAEEAAMAYDRQAFKLRGHSA 194          
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: ERF23_ARATH (Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana GN=ERF023 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.203e-14
Identity = 33/53 (62.26%), Postives = 42/53 (79.25%), Query Frame = 2
Query:  155 YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAK 313
            Y GVRKR+WGK+VSEIR P  ++RIWLGS+   E AA+A+D A FCL+GR A+
Sbjct:   45 YHGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQ 97          
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: ERF21_ARATH (Ethylene-responsive transcription factor ERF021 OS=Arabidopsis thaliana GN=ERF021 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.203e-14
Identity = 35/55 (63.64%), Postives = 43/55 (78.18%), Query Frame = 2
Query:  149 SRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAK 313
            S Y+GVRKRKWGK+VSEIR P ++ RIWLGS++T E AA A+D A F  RGR A+
Sbjct:   22 SAYRGVRKRKWGKWVSEIREPGTKNRIWLGSFETPEMAATAYDVAAFHFRGREAR 76          
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 3.203e-14
Identity = 42/92 (45.65%), Postives = 60/92 (65.22%), Query Frame = 2
Query:   44 VNSIQHHSSKSRIPIT*NPLK--MVKHVVEKPAERCDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAK 313
            ++S    SS +R+  + NP++  M K   E+  E+   RY+GVR+R WGK+ +EIR P+  AR+WLG++DTAE AARA+D A    RG  AK
Sbjct:   39 IDSAPIPSSFARVDSSHNPIEESMSKAFPEEAREK-KRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAK 129          
The following BLAST results are available for this feature:
BLAST of CF504355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
ERF08_ARATH1.699e-1569.81Ethylene-responsive transcription factor ERF008 OS... [more]
ERF55_ARATH8.430e-1559.38Ethylene-responsive transcription factor ERF055 OS... [more]
ERF56_ARATH1.101e-1440.82Ethylene-responsive transcription factor ERF056 OS... [more]
ERF11_ARATH1.878e-1465.38Ethylene-responsive transcription factor ERF011 OS... [more]
RAP21_ARATH2.453e-1464.15Ethylene-responsive transcription factor RAP2-1 OS... [more]
ERF60_ARATH2.453e-1440.59Ethylene-responsive transcription factor ERF060 OS... [more]
ERF54_ARATH3.203e-1465.38Ethylene-responsive transcription factor ERF054 OS... [more]
ERF23_ARATH3.203e-1462.26Ethylene-responsive transcription factor ERF023 OS... [more]
ERF21_ARATH3.203e-1463.64Ethylene-responsive transcription factor ERF021 OS... [more]
EF110_ARATH3.203e-1445.65Ethylene-responsive transcription factor ERF110 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-844 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-17_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504355 ID=CF504355; Name=CF504355; organism=Citrus sinensis; type=EST; length=316bp
GGAATACAAGAATCATCATCCAAATCACACTCAAAAGTTCCGAGTCAACT
CGATACAGCACCACTCGTCTAAATCAAGAATACCCATAACCTGAAACCCT
TTAAAAATGGTGAAGCACGTAGTCGAAAAGCCTGCTGAGAGATGTGACTC
TCGTTACAAGGGTGTCCGAAAGCGAAAGTGGGGGAAATATGTGTCTGAAA
TCAGACTACCCAACAGCCGTGCCCGTATCTGGCTGGGCTCCTACGACACA
GCAGAAAAAGCAGCGCGTGCTTTCGACGCTGCTTTGTTTTGCTTACGTGG
CCGATCAGCCAAGTTT
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