CF504355

Overview
NameCF504355
Unique NameCF504355
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length316
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: ERF87_ARATH (Ethylene-responsive transcription factor ERF087 OS=Arabidopsis thaliana GN=ERF087 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.654e-11
Identity = 28/54 (51.85%), Postives = 41/54 (75.93%), Query Frame = 2
Query:  152 RYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAK 313
            +Y GVR+R WG+Y +EIR P ++ R WLG++DTAE+AA A+D A   +RG +A+
Sbjct:   38 KYVGVRRRPWGRYAAEIRNPTTKERYWLGTFDTAEEAALAYDRAARSIRGLTAR 91          
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.654e-11
Identity = 29/53 (54.72%), Postives = 38/53 (71.70%), Query Frame = 2
Query:  155 YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAK 313
            Y+GVR+R WGK+ +EIR P    R+WLG+++TAE AARA+D A    RG  AK
Sbjct:  136 YRGVRQRPWGKFAAEIRDPKRATRVWLGTFETAEDAARAYDRAAIGFRGPRAK 188          
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: DREB3_ARATH (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB3 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.654e-11
Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 2
Query:  155 YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSA 310
            Y+GVR R WGK+VSEIR P  ++RIWLG++ T E AARA D A   ++G +A
Sbjct:   51 YRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGTAA 102          
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=2 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 7.385e-11
Identity = 31/55 (56.36%), Postives = 40/55 (72.73%), Query Frame = 2
Query:  152 RYKGVRKRKWGKYVSEIRLPNSR-ARIWLGSYDTAEKAARAFDAALFCLRGRSAK 313
            +Y+GVR+R WGK+ +EIR P    AR+WLG+Y+T E AA A+D A F LRG  AK
Sbjct:   91 QYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAK 145          
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: DRE1E_ORYSJ (Dehydration-responsive element-binding protein 1E OS=Oryza sativa subsp. japonica GN=DREB1E PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.385e-11
Identity = 30/52 (57.69%), Postives = 39/52 (75.00%), Query Frame = 2
Query:  155 YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSA 310
            YKGVR R  G++V E+R P+ + RIWLG+++TAE AARA D A   LRGR+A
Sbjct:   53 YKGVRSRNPGRWVCEVREPHGKQRIWLGTFETAEMAARAHDVAAMALRGRAA 104          
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: DRE1E_ORYSI (Dehydration-responsive element-binding protein 1E OS=Oryza sativa subsp. indica GN=DREB1E PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.385e-11
Identity = 30/52 (57.69%), Postives = 39/52 (75.00%), Query Frame = 2
Query:  155 YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSA 310
            YKGVR R  G++V E+R P+ + RIWLG+++TAE AARA D A   LRGR+A
Sbjct:   53 YKGVRSRNPGRWVCEVREPHGKQRIWLGTFETAEMAARAHDVAAMALRGRAA 104          
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 9.645e-11
Identity = 28/53 (52.83%), Postives = 39/53 (73.58%), Query Frame = 2
Query:  155 YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAK 313
            Y+G+RKR WGK+ +EIR P    R+WLG+++TAE+AA A+D A   +RG  AK
Sbjct:   79 YRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAK 131          
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: PTI5_SOLLC (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum GN=PTI5 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.645e-11
Identity = 34/98 (34.69%), Postives = 60/98 (61.22%), Query Frame = 2
Query:   23 NHTQKFRVNSIQHHSSKSRIPIT*NPLKMV-KHVVEKPAERCDSRYKGVRKRKWGKYVSEIR-LPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSA 310
            N +Q+  +  + + ++   IP      +++ ++ + +P +    +Y+GVR+R WGKY +EIR      AR+WLG+++TAE+AA A+D A F +RG  A
Sbjct:   14 NDSQEMVLYEVLNEANALNIPYLPQRNQLLPRNNILRPLQCIGKKYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKA 111          
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.645e-11
Identity = 34/80 (42.50%), Postives = 47/80 (58.75%), Query Frame = 2
Query:   83 PIT*NPLKMVKHVVEKPAERCDSR---YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAK 313
            P   NP    + V     ++ D R   Y+GVR+R WGK+ +EIR P   AR+WLG+++TAE AA A+D A    +G  AK
Sbjct:   63 PSVYNPQDPNQQVAPTHQDQGDLRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAK 142          
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.645e-11
Identity = 28/53 (52.83%), Postives = 39/53 (73.58%), Query Frame = 2
Query:  155 YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAK 313
            Y+GVR+R WGK+ +EIR P   AR+WLG+++TAE+AA A+D A    +G  AK
Sbjct:   39 YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAK 91          
The following BLAST results are available for this feature:
BLAST of CF504355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
ERF87_ARATH5.654e-1151.85Ethylene-responsive transcription factor ERF087 OS... [more]
EF109_ARATH5.654e-1154.72Ethylene-responsive transcription factor ERF109 OS... [more]
DREB3_ARATH5.654e-1155.77Dehydration-responsive element-binding protein 3 O... [more]
ERF99_ARATH7.385e-1156.36Ethylene-responsive transcription factor 13 OS=Ara... [more]
DRE1E_ORYSJ7.385e-1157.69Dehydration-responsive element-binding protein 1E ... [more]
DRE1E_ORYSI7.385e-1157.69Dehydration-responsive element-binding protein 1E ... [more]
RAP23_ARATH9.645e-1152.83Ethylene-responsive transcription factor RAP2-3 OS... [more]
PTI5_SOLLC9.645e-1134.69Pathogenesis-related genes transcriptional activat... [more]
EF114_ARATH9.645e-1142.50Ethylene-responsive transcription factor ERF114 OS... [more]
EF113_ARATH9.645e-1152.83Ethylene-responsive transcription factor ERF113 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-844 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-17_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504355 ID=CF504355; Name=CF504355; organism=Citrus sinensis; type=EST; length=316bp
GGAATACAAGAATCATCATCCAAATCACACTCAAAAGTTCCGAGTCAACT
CGATACAGCACCACTCGTCTAAATCAAGAATACCCATAACCTGAAACCCT
TTAAAAATGGTGAAGCACGTAGTCGAAAAGCCTGCTGAGAGATGTGACTC
TCGTTACAAGGGTGTCCGAAAGCGAAAGTGGGGGAAATATGTGTCTGAAA
TCAGACTACCCAACAGCCGTGCCCGTATCTGGCTGGGCTCCTACGACACA
GCAGAAAAAGCAGCGCGTGCTTTCGACGCTGCTTTGTTTTGCTTACGTGG
CCGATCAGCCAAGTTT
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