CF504360
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504360 vs. ExPASy Swiss-Prot
Match: RS24_SPOFR (40S ribosomal protein S24 OS=Spodoptera frugiperda GN=RpS24 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 2.004e-32 Identity = 67/98 (68.37%), Postives = 81/98 (82.65%), Query Frame = 1 Query: 76 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGL 369 M + TIRTRKFMTNRLL+RKQ V DVLHPG+ VSK E++EKLA+MY V P+ +FVF F+T+FGGGKSTGF LIYD++D AKKFEPK+RL R+GL Sbjct: 1 MTEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGL 97
BLAST of CF504360 vs. ExPASy Swiss-Prot
Match: RS24_MACFA (40S ribosomal protein S24 OS=Macaca fascicularis GN=RPS24 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 3.418e-32 Identity = 68/93 (73.12%), Postives = 78/93 (83.87%), Query Frame = 1 Query: 91 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGL 369 VTIRTRKFMTNRLL RKQ VI VLHPG+A V K E++EKLA+MY P+ IFVF FRTHFGGGK+TGFG+IYDS+D AKK EPK+RL R+GL Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIGVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGL 96
BLAST of CF504360 vs. ExPASy Swiss-Prot
Match: RS24_RHIRA (40S ribosomal protein S24 OS=Rhizomucor racemosus GN=RPS24 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.935e-31 Identity = 64/97 (65.98%), Postives = 78/97 (80.41%), Query Frame = 1 Query: 79 ADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGL 369 AD AVTIRTRKF+TNRLL RKQ V+DV+HPG ANVSK EL+ K+ +MY D + VF F+THFGGGK+TGF LIYD+V++ K FEPK+RL+R GL Sbjct: 20 ADAAVTIRTRKFLTNRLLQRKQMVVDVIHPGLANVSKDELRSKIGKMYKA-DKEVVSVFGFKTHFGGGKTTGFALIYDNVEALKNFEPKHRLVRIGL 115
BLAST of CF504360 vs. ExPASy Swiss-Prot
Match: RS24_ICTPU (40S ribosomal protein S24 OS=Ictalurus punctatus GN=rps24 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.935e-31 Identity = 63/94 (67.02%), Postives = 78/94 (82.98%), Query Frame = 1 Query: 88 AVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGL 369 +VT+RTRKFMTNRLL RKQ V+DVLHPG+A V K E++EKLA+MY P+ +FVF F+T FGGGK+TGF ++YDS+D AKK EPKYRL R+GL Sbjct: 4 SVTLRTRKFMTNRLLQRKQMVLDVLHPGKATVPKTEIREKLAKMYKT-TPDVVFVFGFKTQFGGGKTTGFAMVYDSLDYAKKNEPKYRLARHGL 96
BLAST of CF504360 vs. ExPASy Swiss-Prot
Match: RS24B_SCHPO (40S ribosomal protein S24-B OS=Schizosaccharomyces pombe GN=rps24b PE=2 SV=3) HSP 1 Score: 132.88 bits (333), Expect = 4.935e-31 Identity = 64/94 (68.09%), Postives = 76/94 (80.85%), Query Frame = 1 Query: 85 KAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNG 366 +AVTIRTRKFMTNRLL RKQ V+D+LHPG+AN+SK E++EKLA+MY D + F RTHFGGG+STGF LIYDS +S KKFEP YRL+R G Sbjct: 3 EAVTIRTRKFMTNRLLQRKQMVVDILHPGKANLSKNEIREKLAQMYKT-DSECVQAFGLRTHFGGGRSTGFALIYDSTESMKKFEPHYRLVRVG 95
BLAST of CF504360 vs. ExPASy Swiss-Prot
Match: RS24_TAKRU (40S ribosomal protein S24 OS=Takifugu rubripes GN=rps24 PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 6.445e-31 Identity = 63/93 (67.74%), Postives = 77/93 (82.80%), Query Frame = 1 Query: 91 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGL 369 VT+RTRKFMTNRLL RKQ V+DVLHPG+A V K E++EKLA+MY P+ +FVF FRT FGGGK+TGF ++YDS+D AKK EPK+RL R+GL Sbjct: 5 VTVRTRKFMTNRLLQRKQMVVDVLHPGKATVPKTEIREKLAKMYKT-TPDVVFVFGFRTQFGGGKTTGFAMVYDSLDYAKKNEPKHRLARHGL 96
BLAST of CF504360 vs. ExPASy Swiss-Prot
Match: RS24_ORYLA (40S ribosomal protein S24 OS=Oryzias latipes GN=rps24 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.449e-30 Identity = 63/93 (67.74%), Postives = 76/93 (81.72%), Query Frame = 1 Query: 91 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGL 369 VTIRTRKFMTNRLL RKQ V+DVLHPG+A V K E++EKLA+MY P+ +FVF FRT FGGGK+TGF ++YDS+D AKK EPK+RL +GL Sbjct: 5 VTIRTRKFMTNRLLQRKQMVVDVLHPGKATVPKTEIREKLAKMYKT-TPDVVFVFGFRTQFGGGKTTGFAMVYDSLDYAKKNEPKHRLATHGL 96
BLAST of CF504360 vs. ExPASy Swiss-Prot
Match: RS24A_SCHPO (40S ribosomal protein S24-A OS=Schizosaccharomyces pombe GN=rps24a PE=2 SV=3) HSP 1 Score: 129.413 bits (324), Expect = 5.456e-30 Identity = 60/94 (63.83%), Postives = 77/94 (81.91%), Query Frame = 1 Query: 85 KAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNG 366 +AVTIRTRKFMTNRLL RKQ V+D+LHPG+AN+SK +L+EKL +MY D +++ F RTH+GGG++TGF LIYD V++ KKFEP YRL+R G Sbjct: 3 EAVTIRTRKFMTNRLLQRKQMVVDILHPGKANISKNDLREKLGQMYKT-DASAVQAFGLRTHYGGGRTTGFALIYDDVEAMKKFEPHYRLVRVG 95
BLAST of CF504360 vs. ExPASy Swiss-Prot
Match: RS24_YEAST (40S ribosomal protein S24 OS=Saccharomyces cerevisiae GN=RPS24A PE=1 SV=3) HSP 1 Score: 128.257 bits (321), Expect = 1.216e-29 Identity = 64/94 (68.09%), Postives = 77/94 (81.91%), Query Frame = 1 Query: 88 AVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGL 369 AVTIRTRK ++N LL+RKQFV+DVLHP RANVSK EL+EKLA +Y + +++ VF FRT FGGGKS GFGL+Y+SV AKKFEP YRL+R GL Sbjct: 4 AVTIRTRKVISNPLLARKQFVVDVLHPNRANVSKDELREKLAEVYKA-EKDAVSVFGFRTQFGGGKSVGFGLVYNSVAEAKKFEPTYRLVRYGL 96 The following BLAST results are available for this feature:
BLAST of CF504360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504360 ID=CF504360; Name=CF504360; organism=Citrus sinensis; type=EST; length=369bpback to top |