CF504368

Overview
NameCF504368
Unique NameCF504368
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length336
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504368 vs. ExPASy Swiss-Prot
Match: ACON_STAAR (Aconitate hydratase OS=Staphylococcus aureus (strain MRSA252) GN=acnA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.670e-15
Identity = 32/80 (40.00%), Postives = 46/80 (57.50%), Query Frame = 3
Query:    6 VLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPNSTYIHEPPYFKDMTMDPPGAHGVKDAYCLLNFGDSITTDHISPA 245
            V P++F   Y  +   N  WN++ V    LY +DPNSTYI  P +F+ ++ +P     +     +  FGDS+TTDHISPA
Sbjct:  610 VTPELFIEEYNNVYNNNELWNEIDVTDQPLYDFDPNSTYIQNPSFFQGLSKEPGTIVPLNGLRVMGKFGDSVTTDHISPA 689          

HSP 2 Score: 27.7202 bits (60), Expect = 4.670e-15
Identity = 14/33 (42.42%), Postives = 16/33 (48.48%), Query Frame = 2
Query:  233 HFSGEEVSTKTVPLQSYLLERGVERRDFNSYGS 331
            H S      K  P   YL +  V  R+FNSYGS
Sbjct:  685 HISPAGAIGKDTPAGKYLQDHQVPIREFNSYGS 717          
BLAST of CF504368 vs. ExPASy Swiss-Prot
Match: ACON_STAAN (Aconitate hydratase OS=Staphylococcus aureus (strain N315) GN=acnA PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.670e-15
Identity = 32/80 (40.00%), Postives = 46/80 (57.50%), Query Frame = 3
Query:    6 VLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPNSTYIHEPPYFKDMTMDPPGAHGVKDAYCLLNFGDSITTDHISPA 245
            V P++F   Y  +   N  WN++ V    LY +DPNSTYI  P +F+ ++ +P     +     +  FGDS+TTDHISPA
Sbjct:  610 VTPELFIEEYNNVYNNNELWNEIDVTDQPLYDFDPNSTYIQNPSFFQGLSKEPGTIVPLNGLRVMGKFGDSVTTDHISPA 689          

HSP 2 Score: 27.7202 bits (60), Expect = 4.670e-15
Identity = 14/33 (42.42%), Postives = 16/33 (48.48%), Query Frame = 2
Query:  233 HFSGEEVSTKTVPLQSYLLERGVERRDFNSYGS 331
            H S      K  P   YL +  V  R+FNSYGS
Sbjct:  685 HISPAGAIGKDTPAGKYLQDHQVPIREFNSYGS 717          
BLAST of CF504368 vs. ExPASy Swiss-Prot
Match: ACON_STAAM (Aconitate hydratase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=acnA PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.670e-15
Identity = 32/80 (40.00%), Postives = 46/80 (57.50%), Query Frame = 3
Query:    6 VLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPNSTYIHEPPYFKDMTMDPPGAHGVKDAYCLLNFGDSITTDHISPA 245
            V P++F   Y  +   N  WN++ V    LY +DPNSTYI  P +F+ ++ +P     +     +  FGDS+TTDHISPA
Sbjct:  610 VTPELFIEEYNNVYNNNELWNEIDVTDQPLYDFDPNSTYIQNPSFFQGLSKEPGTIVPLNGLRVMGKFGDSVTTDHISPA 689          

HSP 2 Score: 27.7202 bits (60), Expect = 4.670e-15
Identity = 14/33 (42.42%), Postives = 16/33 (48.48%), Query Frame = 2
Query:  233 HFSGEEVSTKTVPLQSYLLERGVERRDFNSYGS 331
            H S      K  P   YL +  V  R+FNSYGS
Sbjct:  685 HISPAGAIGKDTPAGKYLQDHQVPIREFNSYGS 717          
BLAST of CF504368 vs. ExPASy Swiss-Prot
Match: ACON_STAAC (Aconitate hydratase OS=Staphylococcus aureus (strain COL) GN=acnA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.670e-15
Identity = 32/80 (40.00%), Postives = 46/80 (57.50%), Query Frame = 3
Query:    6 VLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPNSTYIHEPPYFKDMTMDPPGAHGVKDAYCLLNFGDSITTDHISPA 245
            V P++F   Y  +   N  WN++ V    LY +DPNSTYI  P +F+ ++ +P     +     +  FGDS+TTDHISPA
Sbjct:  610 VTPELFIEEYNNVYNNNELWNEIDVTDQPLYDFDPNSTYIQNPSFFQGLSKEPGTIVPLNGLRVMGKFGDSVTTDHISPA 689          

HSP 2 Score: 27.7202 bits (60), Expect = 4.670e-15
Identity = 14/33 (42.42%), Postives = 16/33 (48.48%), Query Frame = 2
Query:  233 HFSGEEVSTKTVPLQSYLLERGVERRDFNSYGS 331
            H S      K  P   YL +  V  R+FNSYGS
Sbjct:  685 HISPAGAIGKDTPAGKYLQDHQVPIREFNSYGS 717          
BLAST of CF504368 vs. ExPASy Swiss-Prot
Match: ACON_BRAJA (Aconitate hydratase OS=Bradyrhizobium japonicum GN=acnA PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 6.066e-15
Identity = 33/80 (41.25%), Postives = 46/80 (57.50%), Query Frame = 3
Query:    6 VLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPNSTYIHEPPYFKDMTMDPPGAHGVKDAYCLLNFGDSITTDHISPA 245
            V   +FK  Y  + KG+  W ++    S+ Y W+ +STY+  PPYF+ M  +P     + +A  L  FGD ITTDHISPA
Sbjct:  610 VTASIFKKKYADVFKGDTNWRKIKTVESETYRWNMSSTYVQNPPYFEGMKKEPEPVTDIVEARILAMFGDKITTDHISPA 689          

HSP 2 Score: 24.6386 bits (52), Expect = 6.066e-15
Identity = 11/23 (47.83%), Postives = 12/23 (52.17%), Query Frame = 2
Query:  263 TVPLQSYLLERGVERRDFNSYGS 331
            T P   YL E  V   DFN YG+
Sbjct:  695 TSPAGKYLSEHQVRPADFNQYGT 717          
BLAST of CF504368 vs. ExPASy Swiss-Prot
Match: ACON_STRMU (Aconitate hydratase OS=Streptococcus mutans GN=acn PE=3 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 3.072e-13
Identity = 32/80 (40.00%), Postives = 45/80 (56.25%), Query Frame = 3
Query:    6 VLPDMFKSTYEAITKGNPTWNQLSVPASKLYSWDPNSTYIHEPPYFKDMTMDPPGAHGVKDAYCLLNFGDSITTDHISPA 245
            V  ++F+  Y  +   +  WNQ+    SK Y W+  STYI  PPYF+++T +      +     L  FGDS+TTDHISPA
Sbjct:  600 VTAELFEEEYGHVFSDSQKWNQIETENSKNYQWNQVSTYIQNPPYFENLT-NTENKIDLSALKVLAKFGDSVTTDHISPA 678          

HSP 2 Score: 27.7202 bits (60), Expect = 3.072e-13
Identity = 14/33 (42.42%), Postives = 16/33 (48.48%), Query Frame = 2
Query:  233 HFSGEEVSTKTVPLQSYLLERGVERRDFNSYGS 331
            H S      +  P   YL E GV   +FNSYGS
Sbjct:  674 HISPAGNIARNSPAARYLEENGVTYAEFNSYGS 706          
BLAST of CF504368 vs. ExPASy Swiss-Prot
Match: ACON_MYCAV (Aconitate hydratase OS=Mycobacterium avium GN=acn PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.689e-13
Identity = 30/77 (38.96%), Postives = 41/77 (53.25%), Query Frame = 3
Query:   15 DMFKSTYEAITKGNPTWNQLSVPASKLYSWDPNSTYIHEPPYFKDMTMDPPGAHGVKDAYCLLNFGDSITTDHISPA 245
            + F   Y  + KG   W  L  P    + W P+STY+ +PPYF+ M  +P     +  A  +   GDS+TTDHISPA
Sbjct:  667 EWFTKNYADVFKGEQAWRNLPTPTRNTFEWSPDSTYVRKPPYFEGMPAEPEPVADISSARVVALLGDSVTTDHISPA 743          
BLAST of CF504368 vs. ExPASy Swiss-Prot
Match: ACON_FRATH (Aconitate hydratase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=acn PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.771e-12
Identity = 35/82 (42.68%), Postives = 45/82 (54.88%), Query Frame = 3
Query:   15 DMFKSTYEAITKGNPTWNQLSVPASKLYSWDPNSTYIHEPPYFKDMTMDPPGAHGVKDAYCLLNFGDSITTDHISPARKYPQ 260
            DMFK  Y  +  G   W +L  P  KLY +D +STYI  P +F+    +      +K A  LL  GDS+TTDHISPA   P+
Sbjct:  609 DMFKKAYATVLDGTEEWQKLKAPEGKLYEFDSSSTYIQCPNFFEKFA-EGNDDLDIKGARTLLMLGDSVTTDHISPAGAIPE 689          
The following BLAST results are available for this feature:
BLAST of CF504368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
ACON_STAAR4.670e-1540.00Aconitate hydratase OS=Staphylococcus aureus (stra... [more]
ACON_STAAN4.670e-1540.00Aconitate hydratase OS=Staphylococcus aureus (stra... [more]
ACON_STAAM4.670e-1540.00Aconitate hydratase OS=Staphylococcus aureus (stra... [more]
ACON_STAAC4.670e-1540.00Aconitate hydratase OS=Staphylococcus aureus (stra... [more]
ACON_BRAJA6.066e-1541.25Aconitate hydratase OS=Bradyrhizobium japonicum GN... [more]
ACON_STRMU3.072e-1340.00Aconitate hydratase OS=Streptococcus mutans GN=acn... [more]
ACON_MYCAV4.689e-1338.96Aconitate hydratase OS=Mycobacterium avium GN=acn ... [more]
ACON_FRATH6.771e-1242.68Aconitate hydratase OS=Francisella tularensis subs... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-857 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-17_E07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504368 ID=CF504368; Name=CF504368; organism=Citrus sinensis; type=EST; length=336bp
CCAGTGTGTTGCCAGACATGTTCAAAAGTACCTATGAGGCTATCACAAAG
GGAAATCCCACGTGGAATCAGTTATCTGTACCAGCTAGTAAACTCTATTC
TTGGGACCCTAACTCAACCTACATTCATGAACCTCCTTACTTCAAGGACA
TGACTATGGATCCTCCTGGAGCCCATGGAGTTAAGGATGCCTACTGCTTG
CTGAACTTTGGTGACAGTATCACTACAGATCACATTTCTCCGGCGAGGAA
GTATCCACAAAGACAGTCCCACTGCAAAGTTACCTGCTAGAGCGTGGTGT
GGAACGCAGGGACTTCAATTCTTATGGTAGTCCGTC
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