CF504369

Overview
NameCF504369
Unique NameCF504369
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length318
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504369 vs. ExPASy Swiss-Prot
Match: INO1_HORVU (Inositol-3-phosphate synthase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 1.126e-51
Identity = 96/105 (91.43%), Postives = 99/105 (94.29%), Query Frame = 2
Query:    2 EGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 316
            EGISWATKD VQQANYFGSLTQAS IRVGSYNGEEIYAPFKS+LPMVNPDD+VFGGWDIS MNLADAM RA+V DIDLQKQLRPYMESM PLPGIYDPDFIAANQ
Sbjct:   86 EGISWATKDKVQQANYFGSLTQASTIRVGSYNGEEIYAPFKSLLPMVNPDDLVFGGWDISSMNLADAMTRAKVLDIDLQKQLRPYMESMCPLPGIYDPDFIAANQ 190          
BLAST of CF504369 vs. ExPASy Swiss-Prot
Match: INO1_SESIN (Inositol-3-phosphate synthase OS=Sesamum indicum PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 1.471e-51
Identity = 95/105 (90.48%), Postives = 101/105 (96.19%), Query Frame = 2
Query:    2 EGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 316
            EGISWATKD VQQANYFGSLTQAS+IRVGS+NGEEIYAPFKS+LPMVNPDD+VFGGWDIS+MNLADAM RA+V DIDLQKQLRPYME MVPLPGIYDPDFIAANQ
Sbjct:   86 EGISWATKDKVQQANYFGSLTQASSIRVGSFNGEEIYAPFKSLLPMVNPDDVVFGGWDISNMNLADAMGRAKVLDIDLQKQLRPYMEHMVPLPGIYDPDFIAANQ 190          
BLAST of CF504369 vs. ExPASy Swiss-Prot
Match: INO1_BRANA (Inositol-3-phosphate synthase OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 3.277e-51
Identity = 93/105 (88.57%), Postives = 102/105 (97.14%), Query Frame = 2
Query:    2 EGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 316
            EGISWATKD VQQANYFGSLTQAS+IRVGS+NGEE+YAPFKS++PMVNPDD+VFGGWDISDMNLADAM RA+V DIDLQKQLRPYME++VPLPGIYDPDFIAANQ
Sbjct:   86 EGISWATKDKVQQANYFGSLTQASSIRVGSFNGEEMYAPFKSLVPMVNPDDVVFGGWDISDMNLADAMGRAKVLDIDLQKQLRPYMENIVPLPGIYDPDFIAANQ 190          
BLAST of CF504369 vs. ExPASy Swiss-Prot
Match: INO1_SPIPO (Inositol-3-phosphate synthase OS=Spirodela polyrrhiza GN=TUR1 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 1.626e-50
Identity = 93/105 (88.57%), Postives = 101/105 (96.19%), Query Frame = 2
Query:    2 EGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 316
            EGISW TK+ VQQANYFGSLTQ+S+IRVGS+NGEEIYAPFKS+LPMVNPD+IVFGGWDISDMNLADAM RA+V DIDLQKQLRPYMESMVPLPGIY+PDFIAANQ
Sbjct:   86 EGISWVTKEKVQQANYFGSLTQSSSIRVGSFNGEEIYAPFKSLLPMVNPDEIVFGGWDISDMNLADAMGRAKVLDIDLQKQLRPYMESMVPLPGIYNPDFIAANQ 190          
BLAST of CF504369 vs. ExPASy Swiss-Prot
Match: INO3_ARATH (Probable inositol-3-phosphate synthase isozyme 3 OS=Arabidopsis thaliana GN=At5g10170 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 3.623e-50
Identity = 92/105 (87.62%), Postives = 102/105 (97.14%), Query Frame = 2
Query:    2 EGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 316
            EGISWATK+ VQQANYFGSLTQAS+IRVGS+NGEEIYAPFKS+LPMVNP++IVFGGWDISDMNLADAMARA+V DIDLQKQ+RP+ME MVPLPGI+DPDFIAANQ
Sbjct:   86 EGISWATKEKVQQANYFGSLTQASSIRVGSFNGEEIYAPFKSLLPMVNPEEIVFGGWDISDMNLADAMARAKVLDIDLQKQMRPFMEHMVPLPGIFDPDFIAANQ 190          
BLAST of CF504369 vs. ExPASy Swiss-Prot
Match: INO1_DICDI (Inositol-3-phosphate synthase OS=Dictyostelium discoideum GN=ino1 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.295e-31
Identity = 64/106 (60.38%), Postives = 82/106 (77.36%), Query Frame = 2
Query:    2 EGISWATKDTVQQANYFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 316
            EG+ W TK  +Q  NYFGS+  +S IR+G   NG + Y P K+++PMV+P+DIVFGGWDI++ NLADAM RA+VFD DLQ QL P+M+++ PLP IY PDFIAANQ
Sbjct:   85 EGLCWNTKQGLQTPNYFGSVVMSSTIRMGMDENGCDAYIPLKNLIPMVHPNDIVFGGWDINNANLADAMQRAQVFDYDLQVQLIPHMKNITPLPSIYFPDFIAANQ 190          
BLAST of CF504369 vs. ExPASy Swiss-Prot
Match: INO1B_XENLA (Inositol-3-phosphate synthase 1-B OS=Xenopus laevis GN=isyna1-B PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 3.766e-31
Identity = 62/104 (59.62%), Postives = 78/104 (75.00%), Query Frame = 2
Query:    5 GISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 316
            G+SW TK   + ANY+GSL Q+S + +G  +  E++ PF+ +LPMVNP+D+VF GWDIS +NLADAM RA V D  LQ+QLRPYME M P P IY P+FIAANQ
Sbjct:   82 GLSWMTKTGKKVANYYGSLFQSSTVCLGRGSSGEVFVPFRDLLPMVNPNDLVFDGWDISSLNLADAMFRAEVLDWQLQEQLRPYMEKMKPRPSIYIPEFIAANQ 185          
BLAST of CF504369 vs. ExPASy Swiss-Prot
Match: INO1A_XENLA (Inositol-3-phosphate synthase 1-A OS=Xenopus laevis GN=isyna1-A PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.869e-30
Identity = 62/104 (59.62%), Postives = 77/104 (74.04%), Query Frame = 2
Query:    5 GISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 316
            G+SW TK   + ANY+GSL Q+S   +GS    +++ PF+ +LPMV+P+DIVF GWDIS +NLADAM RA V D  +Q+QLRPYME M P P IY PDFIAANQ
Sbjct:   82 GLSWMTKTGKKVANYYGSLFQSSTACLGSGPAGDVFVPFRDLLPMVHPNDIVFDGWDISSLNLADAMFRAEVLDWQIQEQLRPYMEKMKPRPSIYIPDFIAANQ 185          
BLAST of CF504369 vs. ExPASy Swiss-Prot
Match: INO1_BOVIN (Inositol-3-phosphate synthase 1 OS=Bos taurus GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 4.604e-29
Identity = 59/104 (56.73%), Postives = 79/104 (75.96%), Query Frame = 2
Query:    8 ISWATKDTVQQANYFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 316
            +SW T+   ++ANY+GSLTQA  + +G    G+E++ PF S+LPMV PDD+VF GWDIS +NLA+AM RA+V D  LQ+QL P+ME+M P P +Y P+FIAANQ
Sbjct:   85 LSWPTRTGRKEANYYGSLTQAGTVSLGLDAEGKEVFVPFSSLLPMVAPDDLVFDGWDISSLNLAEAMRRAQVLDWGLQEQLWPHMEAMRPRPSVYIPEFIAANQ 188          
BLAST of CF504369 vs. ExPASy Swiss-Prot
Match: INO1_MOUSE (Inositol-3-phosphate synthase 1 OS=Mus musculus GN=Isyna1 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.026e-28
Identity = 57/104 (54.81%), Postives = 79/104 (75.96%), Query Frame = 2
Query:    8 ISWATKDTVQQANYFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 316
            ++W T+   ++ANY+GSLTQA  + +G   NG E++ PF ++LPMV P+D+VF GWDIS +NLA+AM RA+V D  LQ+QL P+MES+ P P +Y P+FIAANQ
Sbjct:   85 LTWPTRTGRKEANYYGSLTQAGTVNLGLDENGREVFVPFSALLPMVAPNDLVFDGWDISSLNLAEAMRRAQVLDCGLQEQLWPHMESLRPRPSVYIPEFIAANQ 188          
The following BLAST results are available for this feature:
BLAST of CF504369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_HORVU1.126e-5191.43Inositol-3-phosphate synthase OS=Hordeum vulgare P... [more]
INO1_SESIN1.471e-5190.48Inositol-3-phosphate synthase OS=Sesamum indicum P... [more]
INO1_BRANA3.277e-5188.57Inositol-3-phosphate synthase OS=Brassica napus PE... [more]
INO1_SPIPO1.626e-5088.57Inositol-3-phosphate synthase OS=Spirodela polyrrh... [more]
INO3_ARATH3.623e-5087.62Probable inositol-3-phosphate synthase isozyme 3 O... [more]
INO1_DICDI1.295e-3160.38Inositol-3-phosphate synthase OS=Dictyostelium dis... [more]
INO1B_XENLA3.766e-3159.62Inositol-3-phosphate synthase 1-B OS=Xenopus laevi... [more]
INO1A_XENLA1.869e-3059.62Inositol-3-phosphate synthase 1-A OS=Xenopus laevi... [more]
INO1_BOVIN4.604e-2956.73Inositol-3-phosphate synthase 1 OS=Bos taurus GN=I... [more]
INO1_MOUSE1.026e-2854.81Inositol-3-phosphate synthase 1 OS=Mus musculus GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-858 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-17_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504369 ID=CF504369; Name=CF504369; organism=Citrus sinensis; type=EST; length=318bp
AGAGGGAATCTCCTGGGCCACAAAGGACACTGTGCAACAAGCCAATTATT
TTGGTTCACTTACCCAAGCATCAGCAATTAGAGTTGGGTCTTACAATGGA
GAGGAGATTTATGCTCCATTCAAGAGCATTCTCCCTATGGTGAACCCAGA
TGACATTGTGTTTGGAGGATGGGACATTAGTGACATGAACTTGGCTGATG
CCATGGCCAGGGCTAGAGTGTTTGATATTGATCTTCAAAAGCAACTTAGG
CCTTACATGGAATCAATGGTCCCACTTCCTGGAATCTATGACCCTGATTT
CATTGCTGCCAATCAAGG
back to top